BLASTX nr result

ID: Rheum21_contig00005701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005701
         (458 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [...    83   4e-14
ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g...    83   4e-14
gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus...    83   4e-14
ref|XP_004492878.1| PREDICTED: poly(rC)-binding protein 3-like i...    83   4e-14
ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citr...    81   2e-13
ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citr...    81   2e-13
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm...    80   3e-13
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g...    80   4e-13
emb|CBI16638.3| unnamed protein product [Vitis vinifera]               80   4e-13
ref|XP_004307000.1| PREDICTED: KH domain-containing protein At4g...    79   5e-13
ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|5...    79   6e-13
gb|EXB37630.1| KH domain-containing protein [Morus notabilis]          77   2e-12
gb|ABK93228.1| unknown [Populus trichocarpa]                           77   2e-12
emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]    74   2e-11
gb|EOX96435.1| RNA-binding KH domain-containing protein isoform ...    73   5e-11
ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [...    72   8e-11
ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [...    72   8e-11
gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]         68   1e-09

>ref|XP_003552465.2| PREDICTED: poly(rC)-binding protein 4-like [Glycine max]
          Length = 362

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/50 (84%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHRQIQ  G+ QQVALAKQR+DEYIYSQLI Q+G+Q
Sbjct: 307 SGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQ 356


>ref|XP_006587798.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
           [Glycine max]
          Length = 386

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/50 (84%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHRQIQ  G+ QQVALAKQR+DEYIYSQLI Q+G+Q
Sbjct: 333 SGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQ 382


>gb|ESW11688.1| hypothetical protein PHAVU_008G051300g [Phaseolus vulgaris]
          Length = 379

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/50 (84%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHRQIQ  G+ QQVALAKQR+DEYIYSQLI Q+G+Q
Sbjct: 326 SGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQTGTQ 375


>ref|XP_004492878.1| PREDICTED: poly(rC)-binding protein 3-like isoform X1 [Cicer
           arietinum]
          Length = 379

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 42/50 (84%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHRQIQ  G+ QQVALAKQR+DEYIYSQLI QSG++
Sbjct: 330 SGAMIKVYGGKGEQKHRQIQFGGSAQQVALAKQRVDEYIYSQLIQQSGTE 379


>ref|XP_006445392.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
           gi|568819829|ref|XP_006464447.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X2 [Citrus
           sinensis] gi|568819831|ref|XP_006464448.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X3 [Citrus
           sinensis] gi|568819833|ref|XP_006464449.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X4 [Citrus
           sinensis] gi|557547654|gb|ESR58632.1| hypothetical
           protein CICLE_v10021057mg [Citrus clementina]
          Length = 330

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/50 (82%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHR IQ  G+ QQVALAKQR+DEYIYSQLI Q+G+Q
Sbjct: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQLIQQAGAQ 330


>ref|XP_006445391.1| hypothetical protein CICLE_v10021057mg [Citrus clementina]
           gi|568819827|ref|XP_006464446.1| PREDICTED:
           poly(rC)-binding protein 4-like isoform X1 [Citrus
           sinensis] gi|557547653|gb|ESR58631.1| hypothetical
           protein CICLE_v10021057mg [Citrus clementina]
          Length = 334

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/50 (82%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQKHR IQ  G+ QQVALAKQR+DEYIYSQLI Q+G+Q
Sbjct: 281 SGAMIKVYGGKGEQKHRHIQFGGSAQQVALAKQRVDEYIYSQLIQQAGAQ 330


>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
           gi|223548790|gb|EEF50279.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 363

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLIQ 322
           SGAMIKVYGGKGE+KHR IQ  GT QQVALAKQR+DEYIYSQL+Q
Sbjct: 303 SGAMIKVYGGKGEKKHRHIQFGGTAQQVALAKQRVDEYIYSQLVQ 347


>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
           vinifera]
          Length = 343

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 40/50 (80%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQ HRQIQ  G+ QQVALAKQR+DEYIYSQL+ Q+G+Q
Sbjct: 291 SGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQQAGAQ 340


>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 40/50 (80%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQ HRQIQ  G+ QQVALAKQR+DEYIYSQL+ Q+G+Q
Sbjct: 291 SGAMIKVYGGKGEQNHRQIQFGGSAQQVALAKQRVDEYIYSQLMQQAGAQ 340


>ref|XP_004307000.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
           vesca subsp. vesca]
          Length = 335

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 39/50 (78%), Positives = 44/50 (88%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           +GAMIKVYGGKGE+KHRQIQ  G  QQV LAKQR+DEYIYSQLI Q+G+Q
Sbjct: 272 TGAMIKVYGGKGEEKHRQIQFCGNSQQVVLAKQRVDEYIYSQLIQQAGAQ 321


>ref|XP_002327061.1| predicted protein [Populus trichocarpa]
           gi|566202473|ref|XP_006375108.1| hypothetical protein
           POPTR_0014s04450g [Populus trichocarpa]
           gi|550323424|gb|ERP52905.1| hypothetical protein
           POPTR_0014s04450g [Populus trichocarpa]
          Length = 357

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 38/56 (67%), Positives = 44/56 (78%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLIQSGSQPPLYDAG 289
           SGA+IKV+GGKG QKHR IQL G+ QQVALAKQR+DEYIYSQL+Q        +AG
Sbjct: 288 SGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGTQQYDEAG 343


>gb|EXB37630.1| KH domain-containing protein [Morus notabilis]
          Length = 345

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/59 (67%), Positives = 46/59 (77%), Gaps = 1/59 (1%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQPPLYDAGAY 283
           SGA IKVYGGKGEQK RQIQ  G+ QQVALAKQR+DEY+YSQLI Q+ +Q   +D   Y
Sbjct: 266 SGATIKVYGGKGEQKQRQIQFGGSAQQVALAKQRVDEYVYSQLIQQADAQQAAWDFKGY 324


>gb|ABK93228.1| unknown [Populus trichocarpa]
          Length = 159

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/50 (76%), Positives = 45/50 (90%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGA+IKV+GGKG QKHR IQL G+ QQVALAKQR+DEYIYSQL+ Q+G+Q
Sbjct: 106 SGAVIKVHGGKGAQKHRHIQLAGSSQQVALAKQRVDEYIYSQLVQQAGTQ 155


>emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
          Length = 321

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 40/53 (75%), Positives = 45/53 (84%), Gaps = 4/53 (7%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQ---QVALAKQRIDEYIYSQLI-QSGSQ 310
           SGAMIKVYGGKGEQ HRQIQ  G+ Q   QVALAKQR+DEYIYSQL+ Q+G+Q
Sbjct: 266 SGAMIKVYGGKGEQNHRQIQFGGSAQQAYQVALAKQRVDEYIYSQLMQQAGAQ 318


>gb|EOX96435.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma
           cacao]
          Length = 361

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/52 (73%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQPP 304
           SGA IKVYGGKGEQK R IQ  G+ QQVALAKQR+DE IYSQ+I Q+G+Q P
Sbjct: 306 SGATIKVYGGKGEQKVRHIQFSGSSQQVALAKQRVDECIYSQMIQQAGTQQP 357


>ref|XP_006347939.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum tuberosum]
          Length = 451

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQL-IQSGSQ 310
           SGA IKV+GGKGEQK RQ+ L G+ QQVALAKQR+DEY+YSQL +Q+G +
Sbjct: 316 SGATIKVHGGKGEQKQRQVHLGGSAQQVALAKQRVDEYVYSQLMLQAGGE 365


>ref|XP_004229760.1| PREDICTED: poly(rC)-binding protein 4-like [Solanum lycopersicum]
          Length = 444

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/50 (70%), Positives = 43/50 (86%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQL-IQSGSQ 310
           SGA IKV+GGKGEQK RQ+ L G+ QQVALAKQR+DEY+YSQL +Q+G +
Sbjct: 309 SGATIKVHGGKGEQKQRQVHLGGSAQQVALAKQRVDEYVYSQLMLQAGGE 358


>gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 331

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/50 (70%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
 Frame = -3

Query: 456 SGAMIKVYGGKGEQKHRQIQLVGTPQQVALAKQRIDEYIYSQLI-QSGSQ 310
           SGA IKV GG+GEQ +RQIQ  G+ +QVALAKQR+DEYIYSQ+I Q+G Q
Sbjct: 275 SGATIKVCGGRGEQNYRQIQFGGSAEQVALAKQRVDEYIYSQVIRQAGVQ 324