BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005573
         (937 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|2235275...   231   3e-58
ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like prote...   230   7e-58
gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus pe...   229   1e-57
ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycin...   229   1e-57
ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like prote...   229   1e-57
ref|XP_002331181.1| predicted protein [Populus trichocarpa] gi|5...   228   3e-57
gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus...   227   4e-57
ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus tri...   227   4e-57
ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like prote...   226   7e-57
ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [A...   226   1e-56
ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citr...   225   2e-56
ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like prote...   224   4e-56
ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like prote...   222   1e-55
ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like prote...   221   3e-55
gb|EOY30223.1| Small nuclear ribonucleoprotein family protein is...   221   3e-55
ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like prote...   221   4e-55
gb|EOY27290.1| Small nuclear ribonucleoprotein family protein is...   220   5e-55
ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-l...   219   1e-54
ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like prote...   218   3e-54
ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Me...   218   3e-54

>ref|XP_002532727.1| lsm1, putative [Ricinus communis] gi|223527535|gb|EEF29658.1| lsm1,
           putative [Ricinus communis]
          Length = 128

 Score =  231 bits (589), Expect = 3e-58
 Identities = 112/128 (87%), Positives = 123/128 (96%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRDGRKL GILRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLY+IRGENVVL+GELD+E+++LPPHMTRVS AEIRRAQKAER+A DLKG +RK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDLEKEELPPHMTRVSAAEIRRAQKAERDATDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_004303709.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score =  230 bits (586), Expect = 7e-58
 Identities = 112/128 (87%), Positives = 122/128 (95%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKK+LVLLRDGRKL GILRSFDQ+ANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKILVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCD+PLGLYVIRGENVVL+GELD ER++LPPHMTRVS AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDLPLGLYVIRGENVVLIGELDAEREELPPHMTRVSPAEIKRAQKAEREASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>gb|EMJ16349.1| hypothetical protein PRUPE_ppa013348mg [Prunus persica]
          Length = 128

 Score =  229 bits (583), Expect = 1e-57
 Identities = 113/128 (88%), Positives = 121/128 (94%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRDGRKL GILRSFDQ+ANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD ER++LPPHMTRVS AEI+ AQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKSAQKAEREASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>ref|NP_001237465.1| uncharacterized protein LOC100306352 [Glycine max]
           gi|255628281|gb|ACU14485.1| unknown [Glycine max]
           gi|561008464|gb|ESW07413.1| hypothetical protein
           PHAVU_010G127800g [Phaseolus vulgaris]
          Length = 128

 Score =  229 bits (583), Expect = 1e-57
 Identities = 113/128 (88%), Positives = 121/128 (94%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRDGRKL G LRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+ER++LP HMTRVSTAEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002271476.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Vitis
           vinifera] gi|147803430|emb|CAN62239.1| hypothetical
           protein VITISV_033727 [Vitis vinifera]
           gi|297742980|emb|CBI35847.3| unnamed protein product
           [Vitis vinifera]
          Length = 128

 Score =  229 bits (583), Expect = 1e-57
 Identities = 112/128 (87%), Positives = 122/128 (95%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRD RKL GILRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDNRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+E+++LPPHMTRVS AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_002331181.1| predicted protein [Populus trichocarpa]
           gi|566149434|ref|XP_006369123.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
           gi|118489961|gb|ABK96777.1| unknown [Populus trichocarpa
           x Populus deltoides] gi|550347483|gb|ERP65692.1| small
           nuclear ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score =  228 bits (581), Expect = 3e-57
 Identities = 112/128 (87%), Positives = 122/128 (95%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLA+YLDKKLLVLLRDGRKL G+LRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIYLSTSLANYLDKKLLVLLRDGRKLMGLLRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDI LGLYVIRGENVVL+GELD+ER++LPPHMTRVS AEIRRAQKAEREA DLKG +RK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIRRAQKAEREATDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>gb|ESW07414.1| hypothetical protein PHAVU_010G127900g [Phaseolus vulgaris]
          Length = 128

 Score =  227 bits (579), Expect = 4e-57
 Identities = 112/128 (87%), Positives = 121/128 (94%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRDGRKL G LRSFDQ+ANAVLEGACERVIVG+L
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACERVIVGEL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+ER++LP HMTRVSTAEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPEHMTRVSTAEIKRAQKAEREASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_002304120.1| small nuclear ribonucleoprotein [Populus trichocarpa]
           gi|222841552|gb|EEE79099.1| small nuclear
           ribonucleoprotein [Populus trichocarpa]
          Length = 128

 Score =  227 bits (579), Expect = 4e-57
 Identities = 112/128 (87%), Positives = 121/128 (94%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLLVLLRDGRKL GILRSFDQ+ANAVLEGACER IVGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGILRSFDQFANAVLEGACERAIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDI LGLYVIRGENVVL+GELD+ER++LPPHMTRVS AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIHLGLYVIRGENVVLIGELDLEREELPPHMTRVSEAEIKRAQKAEREATDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_004510523.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like isoform X1
           [Cicer arietinum]
          Length = 128

 Score =  226 bits (577), Expect = 7e-57
 Identities = 110/128 (85%), Positives = 120/128 (93%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED +LSTSLASYLDKKLL+LLRDGRKL G LRSFDQ+ANAVLEGACERV+VGDL
Sbjct: 1   MSWAGPEDIYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVVVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+ER++LPPHMTRV T EI RAQKAER+A DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDMEREELPPHMTRVPTEEILRAQKAERDASDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>ref|XP_006836602.1| hypothetical protein AMTR_s00131p00107350 [Amborella trichopoda]
           gi|548839141|gb|ERM99455.1| hypothetical protein
           AMTR_s00131p00107350 [Amborella trichopoda]
          Length = 128

 Score =  226 bits (575), Expect = 1e-56
 Identities = 111/128 (86%), Positives = 120/128 (93%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED FLSTSLASYLDKKLLVLLRDGRKL GILRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPEDIFLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCD+PLGLYVIRGENVVL+GELD ER++LP HMTRVS  EI+RAQKAER+A DLKG +RK
Sbjct: 61  YCDLPLGLYVIRGENVVLIGELDPEREELPAHMTRVSAVEIKRAQKAERDAKDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_006426701.1| hypothetical protein CICLE_v10026767mg [Citrus clementina]
           gi|568822947|ref|XP_006465886.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm1-like [Citrus
           sinensis] gi|557528691|gb|ESR39941.1| hypothetical
           protein CICLE_v10026767mg [Citrus clementina]
          Length = 128

 Score =  225 bits (574), Expect = 2e-56
 Identities = 110/128 (85%), Positives = 120/128 (93%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGP+D +LSTSLASYLDKKLLVLLRDGRKL G L SFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAGPDDVYLSTSLASYLDKKLLVLLRDGRKLMGTLCSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+ERD+LPPH+T VS AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLERDELPPHLTHVSVAEIKRAQKAEREASDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_004241918.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum]
          Length = 128

 Score =  224 bits (571), Expect = 4e-56
 Identities = 109/128 (85%), Positives = 120/128 (93%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWA PED +LSTSLASYLDKKLLVLLRDGRKL G LRSFDQ+ANAVLEGACERVIVG++
Sbjct: 1   MSWASPEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLY+IRGENVVL+GELDV++++LPPHMTRV  AEIRRAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>ref|XP_004235554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           lycopersicum] gi|565351988|ref|XP_006342929.1|
           PREDICTED: probable U6 snRNA-associated Sm-like protein
           LSm1-like [Solanum tuberosum]
          Length = 128

 Score =  222 bits (566), Expect = 1e-55
 Identities = 108/128 (84%), Positives = 119/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWA PED + STSLASYLDKKLLVLLRDGRKL GILRSFDQ+ANAVLE ACER IVGDL
Sbjct: 1   MSWASPEDIYTSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERAIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLY+IRGENVVL+GELDV++++LPPHMTRVS AEIRRAQKAER++ DLKG +RK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVSEAEIRRAQKAERDSTDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>ref|XP_006357408.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Solanum
           tuberosum]
          Length = 128

 Score =  221 bits (563), Expect = 3e-55
 Identities = 108/128 (84%), Positives = 119/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWA  ED +LSTSLASYLDKKLLVLLRDGRKL G LRSFDQ+ANAVLEGACERVIVG++
Sbjct: 1   MSWASSEDIYLSTSLASYLDKKLLVLLRDGRKLLGTLRSFDQFANAVLEGACERVIVGEI 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLY+IRGENVVL+GELDV++++LPPHMTRV  AEIRRAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYIIRGENVVLIGELDVDKEELPPHMTRVPEAEIRRAQKAEREATDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLDMD
Sbjct: 121 RMEFLDMD 128


>gb|EOY30223.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score =  221 bits (563), Expect = 3e-55
 Identities = 108/128 (84%), Positives = 119/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGP+D FLSTSLA+YLDKKLLVLLRDGRKL G+LRSFDQ+AN VLEGACERVIVGDL
Sbjct: 1   MSWAGPDDIFLSTSLATYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+E+++LP HMT VS AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPSHMTPVSAAEIKRAQKAEREATDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_003633086.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Vitis
           vinifera] gi|297738539|emb|CBI27784.3| unnamed protein
           product [Vitis vinifera]
          Length = 128

 Score =  221 bits (562), Expect = 4e-55
 Identities = 107/128 (83%), Positives = 118/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED   STSLASYLDKKLLVLLRDGRKL G+LRSFDQ+ANAVLEGACER IVGD+
Sbjct: 1   MSWAGPEDLLFSTSLASYLDKKLLVLLRDGRKLLGVLRSFDQFANAVLEGACERAIVGDI 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+++++LPPHMTRV  AEI+RAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLLGELDLDKEELPPHMTRVPEAEIKRAQKAEREATDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>gb|EOY27290.1| Small nuclear ribonucleoprotein family protein isoform 1 [Theobroma
           cacao]
          Length = 128

 Score =  220 bits (561), Expect = 5e-55
 Identities = 109/128 (85%), Positives = 119/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           M + GPED +LSTSLASYLDKKLLVLLRDGRKL G LRSFDQ+ANAVLEGAC+RVIVGDL
Sbjct: 1   MPYLGPEDIYLSTSLASYLDKKLLVLLRDGRKLMGTLRSFDQFANAVLEGACDRVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+ER++LPPHMT VS AEIRRAQKAEREA DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEREELPPHMTCVSAAEIRRAQKAEREARDLKGTMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD+D
Sbjct: 121 RMEFLDLD 128


>ref|XP_006474709.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm1-like
           [Citrus sinensis]
          Length = 128

 Score =  219 bits (558), Expect = 1e-54
 Identities = 105/128 (82%), Positives = 120/128 (93%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGP+D FLSTSLA+YLDKK+LVLLRDGRKL G+LRSFDQ+AN VLEGACER+IVGDL
Sbjct: 1   MSWAGPDDVFLSTSLATYLDKKILVLLRDGRKLLGLLRSFDQFANVVLEGACERIIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GELD+E+++LP HMTRVSTAEI+RAQKAE++A  LKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELDLEKEELPAHMTRVSTAEIKRAQKAEKDATVLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_004287651.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Fragaria
           vesca subsp. vesca]
          Length = 128

 Score =  218 bits (555), Expect = 3e-54
 Identities = 106/128 (82%), Positives = 118/128 (92%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWAGPED+ LSTSLASYLDKKLLVLLRDGRKL G+LRSFDQ+AN VLEGACERVIVGDL
Sbjct: 1   MSWAGPEDSLLSTSLASYLDKKLLVLLRDGRKLLGLLRSFDQFANVVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIRRAQKAEREAMDLKGMIRK 638
           YCDIPLGLYVIRGENVVL+GEL++ +++LPPHMT V  AEI+RAQKAER+A DLKG +RK
Sbjct: 61  YCDIPLGLYVIRGENVVLIGELELNKEELPPHMTLVPEAEIKRAQKAERDASDLKGSMRK 120

Query: 639 RMEFLDMD 662
           RMEFLD D
Sbjct: 121 RMEFLDFD 128


>ref|XP_003627334.1| U6 snRNA-associated Sm-like protein LSm1 [Medicago truncatula]
           gi|355521356|gb|AET01810.1| U6 snRNA-associated Sm-like
           protein LSm1 [Medicago truncatula]
          Length = 131

 Score =  218 bits (555), Expect = 3e-54
 Identities = 108/131 (82%), Positives = 119/131 (90%), Gaps = 3/131 (2%)
 Frame = +3

Query: 279 MSWAGPEDAFLSTSLASYLDKKLLVLLRDGRKLSGILRSFDQYANAVLEGACERVIVGDL 458
           MSWA PED +LSTSLASYLDKKLL+LLRDGRKL G LRSFDQ+ANAVLEGACERVIVGDL
Sbjct: 1   MSWAAPEDLYLSTSLASYLDKKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVGDL 60

Query: 459 YCDIPLGLYVIRGENVVLVGELDVERDDLPPHMTRVSTAEIR---RAQKAEREAMDLKGM 629
           YCDIPLGLYVIRGENVVL+GE+DVER++LPPHMTRV T EIR   RAQK ER+A +LKG 
Sbjct: 61  YCDIPLGLYVIRGENVVLIGEMDVEREELPPHMTRVPTEEIRRGIRAQKVERDASELKGT 120

Query: 630 IRKRMEFLDMD 662
           +RKRMEFLD+D
Sbjct: 121 MRKRMEFLDLD 131