BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00004547
         (269 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875406.1| ribosomal protein L12-C [Arabidopsis lyrata ...    82   7e-14
ref|NP_189423.1| 50S ribosomal protein L12-3 [Arabidopsis thalia...    82   1e-13
gb|AAM64725.1| 50S ribosomal protein L12-C [Arabidopsis thaliana]      82   1e-13
emb|CAA48183.1| ribosomal protein L12 [Arabidopsis thaliana]           82   1e-13
ref|XP_006291846.1| hypothetical protein CARUB_v10018021mg, part...    80   2e-13
gb|EMJ18373.1| hypothetical protein PRUPE_ppa011994mg [Prunus pe...    79   6e-13
ref|XP_006395398.1| hypothetical protein EUTSA_v10004964mg [Eutr...    78   1e-12
ref|XP_006395399.1| hypothetical protein EUTSA_v10004960mg [Eutr...    77   2e-12
ref|XP_002875404.1| ribosomal protein L12-A [Arabidopsis lyrata ...    77   3e-12
ref|NP_189421.1| 50S ribosomal protein L12-1 [Arabidopsis thalia...    76   4e-12
ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloro...    76   5e-12
ref|XP_006291886.1| hypothetical protein CARUB_v10018063mg [Caps...    75   7e-12
sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal protein L12, ...    74   2e-11
gb|EXC20300.1| 50S ribosomal protein L12-1 [Morus notabilis]           71   1e-10
ref|XP_004142800.1| PREDICTED: 50S ribosomal protein L12, chloro...    71   2e-10
ref|XP_004304630.1| PREDICTED: 50S ribosomal protein L12, chloro...    70   2e-10
ref|XP_002298536.1| 50S ribosomal protein L12-2 [Populus trichoc...    69   5e-10
ref|XP_002875405.1| ribosomal protein L12-B [Arabidopsis lyrata ...    69   8e-10
gb|EOY02418.1| Ribosomal protein L12-A [Theobroma cacao]               68   1e-09
ref|NP_189422.1| 50S ribosomal protein L12-2 [Arabidopsis thalia...    62   6e-08

>ref|XP_002875406.1| ribosomal protein L12-C [Arabidopsis lyrata subsp. lyrata]
           gi|297321244|gb|EFH51665.1| ribosomal protein L12-C
           [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = +1

Query: 4   SKLQPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           SK   + FP R +S  +SHRA N+RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD LQD
Sbjct: 28  SKPTAIEFPFRLSS--SSHRAINLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQD 85

Query: 184 K 186
           K
Sbjct: 86  K 86


>ref|NP_189423.1| 50S ribosomal protein L12-3 [Arabidopsis thaliana]
           gi|21431811|sp|P36212.2|RK123_ARATH RecName: Full=50S
           ribosomal protein L12-3, chloroplastic; AltName:
           Full=CL12-C; Flags: Precursor
           gi|11994490|dbj|BAB02531.1| 50S ribosomal protein
           L12-like [Arabidopsis thaliana]
           gi|14335124|gb|AAK59841.1| AT3g27850/K16N12_7
           [Arabidopsis thaliana] gi|22530924|gb|AAM96966.1| 50S
           ribosomal protein L12-C [Arabidopsis thaliana]
           gi|23506071|gb|AAN28895.1| At3g27850/K16N12_7
           [Arabidopsis thaliana] gi|332643851|gb|AEE77372.1| 50S
           ribosomal protein L12-3 [Arabidopsis thaliana]
          Length = 187

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/61 (68%), Positives = 52/61 (85%)
 Frame = +1

Query: 4   SKLQPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           SK   + FP R +S ++SHRA N+RP++AVEAPEKIEK+GSE+S+LTLEEARILVD LQD
Sbjct: 28  SKPTAIEFPFRLSS-SSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQD 86

Query: 184 K 186
           K
Sbjct: 87  K 87


>gb|AAM64725.1| 50S ribosomal protein L12-C [Arabidopsis thaliana]
          Length = 187

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/61 (68%), Positives = 52/61 (85%)
 Frame = +1

Query: 4   SKLQPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           SK   + FP R +S ++SHRA N+RP++AVEAPEKIEK+GSE+S+LTLEEARILVD LQD
Sbjct: 28  SKPTAIEFPFRLSS-SSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQD 86

Query: 184 K 186
           K
Sbjct: 87  K 87


>emb|CAA48183.1| ribosomal protein L12 [Arabidopsis thaliana]
          Length = 187

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 42/61 (68%), Positives = 52/61 (85%)
 Frame = +1

Query: 4   SKLQPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           SK   + FP R +S ++SHRA N+RP++AVEAPEKIEK+GSE+S+LTLEEARILVD LQD
Sbjct: 28  SKPTAIEFPFRLSS-SSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQD 86

Query: 184 K 186
           K
Sbjct: 87  K 87


>ref|XP_006291846.1| hypothetical protein CARUB_v10018021mg, partial [Capsella rubella]
           gi|482560553|gb|EOA24744.1| hypothetical protein
           CARUB_v10018021mg, partial [Capsella rubella]
          Length = 211

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 42/61 (68%), Positives = 50/61 (81%)
 Frame = +1

Query: 4   SKLQPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           SK   + FP R  S  ++HRA N+RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD LQD
Sbjct: 53  SKPTAIEFPFRLGS--STHRAINLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQD 110

Query: 184 K 186
           K
Sbjct: 111 K 111


>gb|EMJ18373.1| hypothetical protein PRUPE_ppa011994mg [Prunus persica]
          Length = 188

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = +1

Query: 19  LHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDKL 189
           L FP    + + +HRA ++RPLAAVEAPEKIEKLG+++S+LTLEEARILVD LQDKL
Sbjct: 33  LQFPFNPQNPSLTHRATHLRPLAAVEAPEKIEKLGADISSLTLEEARILVDFLQDKL 89


>ref|XP_006395398.1| hypothetical protein EUTSA_v10004964mg [Eutrema salsugineum]
           gi|557092037|gb|ESQ32684.1| hypothetical protein
           EUTSA_v10004964mg [Eutrema salsugineum]
          Length = 190

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/58 (70%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
 Frame = +1

Query: 19  LHFPLR--RASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDK 186
           + FP R   +S   SHRA N+RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD LQDK
Sbjct: 33  VEFPARFGASSSTLSHRAINLRPVAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDK 90


>ref|XP_006395399.1| hypothetical protein EUTSA_v10004960mg [Eutrema salsugineum]
           gi|557092038|gb|ESQ32685.1| hypothetical protein
           EUTSA_v10004960mg [Eutrema salsugineum]
          Length = 191

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/63 (63%), Positives = 50/63 (79%), Gaps = 2/63 (3%)
 Frame = +1

Query: 4   SKLQPLHFPLR--RASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLL 177
           S+   + FP R   +S   +HRA ++RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD L
Sbjct: 29  SRPSAIEFPFRLGASSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYL 88

Query: 178 QDK 186
           QDK
Sbjct: 89  QDK 91


>ref|XP_002875404.1| ribosomal protein L12-A [Arabidopsis lyrata subsp. lyrata]
           gi|297321242|gb|EFH51663.1| ribosomal protein L12-A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 184

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   SKLQPLHFPLR---RASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDL 174
           S+   + FP R    +S   +HRA ++RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD 
Sbjct: 28  SRTTTIEFPSRFGGASSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDY 87

Query: 175 LQDK 186
           LQDK
Sbjct: 88  LQDK 91


>ref|NP_189421.1| 50S ribosomal protein L12-1 [Arabidopsis thaliana]
           gi|548653|sp|P36210.1|RK121_ARATH RecName: Full=50S
           ribosomal protein L12-1, chloroplastic; AltName:
           Full=CL12-A; Flags: Precursor gi|468771|emb|CAA48181.1|
           ribosomal protein L12 [Arabidopsis thaliana]
           gi|11994488|dbj|BAB02529.1| 50S ribosomal protein
           L12-like [Arabidopsis thaliana]
           gi|15450974|gb|AAK96758.1| 50s ribosomal protein
           L12-like [Arabidopsis thaliana]
           gi|15810119|gb|AAL07203.1| putative 50S ribosomal
           protein L12-A [Arabidopsis thaliana]
           gi|22530940|gb|AAM96974.1| 50S ribosomal protein L12-A
           [Arabidopsis thaliana] gi|23198422|gb|AAN15738.1| 50S
           ribosomal protein L12-A [Arabidopsis thaliana]
           gi|29824165|gb|AAP04043.1| putative 50S ribosomal
           protein L12-A [Arabidopsis thaliana]
           gi|30102916|gb|AAP21376.1| At3g27830 [Arabidopsis
           thaliana] gi|332643847|gb|AEE77368.1| 50S ribosomal
           protein L12-1 [Arabidopsis thaliana]
          Length = 191

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/64 (62%), Positives = 50/64 (78%), Gaps = 3/64 (4%)
 Frame = +1

Query: 4   SKLQPLHFPLR---RASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDL 174
           S+   + FP R    +S   +HRA ++RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD 
Sbjct: 28  SRTTTIEFPSRFGGGSSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDY 87

Query: 175 LQDK 186
           LQDK
Sbjct: 88  LQDK 91


>ref|XP_002277258.1| PREDICTED: 50S ribosomal protein L12, chloroplastic [Vitis
           vinifera]
          Length = 184

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/59 (69%), Positives = 45/59 (76%)
 Frame = +1

Query: 13  QPLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDKL 189
           Q L FP R       HRA  VRP++AV APEKIEK+G+ELSNLTLEEARILVD LQDKL
Sbjct: 29  QTLDFPFRNPKII--HRATFVRPISAVAAPEKIEKIGTELSNLTLEEARILVDWLQDKL 85


>ref|XP_006291886.1| hypothetical protein CARUB_v10018063mg [Capsella rubella]
           gi|482560593|gb|EOA24784.1| hypothetical protein
           CARUB_v10018063mg [Capsella rubella]
          Length = 191

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 39/59 (66%), Positives = 48/59 (81%), Gaps = 3/59 (5%)
 Frame = +1

Query: 19  LHFPLR---RASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDK 186
           + FP R    +S   +HRA ++RP+AAVEAPEKIEK+GSE+S+LTLEEARILVD LQDK
Sbjct: 33  IEFPSRFGGASSSTLTHRATHLRPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDK 91


>sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal protein L12, chloroplastic; AltName:
           Full=CL12; Flags: Precursor gi|170115|gb|AAA34031.1|
           ribosomal L12 precursor [Spinacia oleracea]
           gi|47154904|emb|CAA31551.1| SocL12 [Spinacia oleracea]
          Length = 189

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/62 (62%), Positives = 47/62 (75%), Gaps = 3/62 (4%)
 Frame = +1

Query: 13  QPLHFPLRRAS---FATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQD 183
           QPL FP R  +     +S R   +RP+AAVEAPEKIE+LG++LS LTLEEAR+LVD LQD
Sbjct: 29  QPLQFPFRTTTNPISLSSTRTTRLRPIAAVEAPEKIEQLGTQLSGLTLEEARVLVDWLQD 88

Query: 184 KL 189
           KL
Sbjct: 89  KL 90


>gb|EXC20300.1| 50S ribosomal protein L12-1 [Morus notabilis]
          Length = 193

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 37/59 (62%), Positives = 45/59 (76%), Gaps = 2/59 (3%)
 Frame = +1

Query: 19  LHFPL--RRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDKL 189
           L FP   +  S + SHRA++VRPLAAV  PEKIEK+G E++ LTLEEA+ LVD LQDKL
Sbjct: 34  LQFPFNPQNPSLSASHRASHVRPLAAVAVPEKIEKIGDEIAGLTLEEAKGLVDFLQDKL 92


>ref|XP_004142800.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 183

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/69 (55%), Positives = 47/69 (68%), Gaps = 11/69 (15%)
 Frame = +1

Query: 16  PLHFPLRRASFATS-----------HRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARI 162
           PLH P   +SF+              R  ++RP+AAV APEKIEKLGS++S+LTLEEAR+
Sbjct: 13  PLHLPRSHSSFSPLSFRPTTLQFPYRRPTHLRPIAAVSAPEKIEKLGSDISSLTLEEARL 72

Query: 163 LVDLLQDKL 189
           LVD LQDKL
Sbjct: 73  LVDFLQDKL 81


>ref|XP_004304630.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 187

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 37/58 (63%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
 Frame = +1

Query: 19  LHFPLRRASFAT-SHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDKL 189
           L FP       T SHRA ++RP+AAV APEKIEKLG+++S+LTLEEAR+LVD LQ+KL
Sbjct: 31  LQFPFSPHQNPTLSHRATHLRPVAAVAAPEKIEKLGADISSLTLEEARVLVDYLQEKL 88


>ref|XP_002298536.1| 50S ribosomal protein L12-2 [Populus trichocarpa]
           gi|118483906|gb|ABK93843.1| unknown [Populus
           trichocarpa] gi|222845794|gb|EEE83341.1| 50S ribosomal
           protein L12-2 [Populus trichocarpa]
          Length = 187

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 38/57 (66%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
 Frame = +1

Query: 22  HFPL-RRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDKL 189
           HF L  R     S R+++VRP+AAV APEKIEKLG+E+S+LTLEEAR LVD LQDKL
Sbjct: 30  HFLLFPRRQLPLSFRSSHVRPVAAVAAPEKIEKLGAEISSLTLEEARTLVDYLQDKL 86


>ref|XP_002875405.1| ribosomal protein L12-B [Arabidopsis lyrata subsp. lyrata]
           gi|297321243|gb|EFH51664.1| ribosomal protein L12-B
           [Arabidopsis lyrata subsp. lyrata]
          Length = 190

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 33/57 (57%), Positives = 45/57 (78%)
 Frame = +1

Query: 16  PLHFPLRRASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDK 186
           P  F +  +S   SHRA  + P++AV+AP+KI+K+GSE+S+LTLEEARILVD +QDK
Sbjct: 33  PFSFGVSSSSSTLSHRAIYLHPISAVKAPKKIKKIGSEISSLTLEEARILVDYVQDK 89


>gb|EOY02418.1| Ribosomal protein L12-A [Theobroma cacao]
          Length = 192

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/64 (57%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +1

Query: 1   SSKLQPLHFPLRRASFAT-SHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLL 177
           S +   L FPLR  + +  +HR+  +RPL A  APEKIEKLG+E+S+LTLEEAR LVD L
Sbjct: 29  SFRTPSLQFPLRSTTPSNLTHRSTFLRPLNATAAPEKIEKLGNEISSLTLEEARTLVDYL 88

Query: 178 QDKL 189
           Q+KL
Sbjct: 89  QEKL 92


>ref|NP_189422.1| 50S ribosomal protein L12-2 [Arabidopsis thaliana]
           gi|21431810|sp|P36211.2|RK122_ARATH RecName: Full=50S
           ribosomal protein L12-2, chloroplastic; AltName:
           Full=CL12-B; Flags: Precursor
           gi|11994489|dbj|BAB02530.1| 50S ribosomal protein
           L12-like [Arabidopsis thaliana]
           gi|332643850|gb|AEE77371.1| 50S ribosomal protein L12-2
           [Arabidopsis thaliana]
          Length = 193

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 29/49 (59%), Positives = 41/49 (83%)
 Frame = +1

Query: 40  ASFATSHRAANVRPLAAVEAPEKIEKLGSELSNLTLEEARILVDLLQDK 186
           +S   SHRA  + P++AV+ P+KI+K+GSE+S+LTLEE+RILVD +QDK
Sbjct: 44  SSSTLSHRAIYLHPISAVKTPKKIKKIGSEISSLTLEESRILVDYVQDK 92