BLASTX nr result

ID: Rheum21_contig00004534 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00004534
         (607 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006819535.1| PREDICTED: uncharacterized protein LOC102801...    57   5e-06
ref|XP_005332751.1| PREDICTED: glutamine-rich protein 2-like [Ic...    56   7e-06

>ref|XP_006819535.1| PREDICTED: uncharacterized protein LOC102801294, partial
           [Saccoglossus kowalevskii]
          Length = 248

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
 Frame = -2

Query: 486 GGDKSQSLESSINNQDDFLAMDDDNVSLEASDDIKCLAALGEGPKSVAALSYNGISPVRM 307
           G D    L   I+NQ       D+   LE   D + L A+G   +++ A+  +  + + +
Sbjct: 82  GIDNQTLLAVGIDNQTLLAVEIDNQTLLEVGIDNQTLLAVGIDNQTLLAVGIDNQTLLAV 141

Query: 306 GGHEKSLLRLDVTNKSLPAPNDDKRSLVPLGDEEGNLIAPG-HNQTSVVVLTDEEQTLVV 130
           G   ++LL + + +++L     D ++L+ +G +   L+A G  NQT + V  D+ QTL+V
Sbjct: 142 GIDNQTLLAVGIDDQTLLLVGIDNQTLLAMGIDNQTLLAVGIDNQTQLAVGIDD-QTLLV 200

Query: 129 SGNDDQDKHMVAVGDEQRNVVLPGHDQTSLIISKHEDNLLASG 1
            G D+Q    V + D+Q  +++   +QT L++      LLA G
Sbjct: 201 VGIDNQTLLAVRI-DDQTLLLVRSDNQTLLVVGIDNQTLLAVG 242


>ref|XP_005332751.1| PREDICTED: glutamine-rich protein 2-like [Ictidomys
           tridecemlineatus]
          Length = 997

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = -2

Query: 327 GISPVRMGGHEKSLLRLDVTNKSLPAPNDDKRSLVPLGDEEGNLIAPGHNQTSVVVLTDE 148
           G+ P  MG H   L+   V  +++  P  D+R LVP G ++  L+ PG +Q +V     +
Sbjct: 381 GLVPPDMGQH--GLVPTGVDQRAVEPPGMDQRGLVPRGVDKSGLVPPGMDQRAVAPARVD 438

Query: 147 EQTLVVSGNDDQDKHMVAVGDEQRNVVLPGHDQTSLI 37
           ++ LV  G D Q   +V VG +QR +V PG DQ  L+
Sbjct: 439 QRGLVPPGMDQQ--AVVPVGVDQRGLVPPGVDQRGLV 473


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