BLASTX nr result
ID: Rheum21_contig00004176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00004176
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ESW13886.1| hypothetical protein PHAVU_008G234500g [Phaseolus... 103 2e-20
ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding prote... 102 4e-20
ref|XP_006430634.1| hypothetical protein CICLE_v10011836mg [Citr... 102 4e-20
ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citr... 102 4e-20
ref|XP_004490867.1| PREDICTED: double-stranded RNA-binding prote... 102 4e-20
gb|EOY03977.1| DsRNA-binding domain-like superfamily protein, pu... 100 2e-19
ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote... 97 2e-18
ref|XP_006383311.1| hypothetical protein POPTR_0005s14370g [Popu... 96 7e-18
ref|XP_002302963.1| predicted protein [Populus trichocarpa] 96 7e-18
gb|EXB57534.1| Double-stranded RNA-binding protein 4 [Morus nota... 91 2e-16
gb|EXB85835.1| Double-stranded RNA-binding protein 4 [Morus nota... 90 4e-16
gb|ESW13885.1| hypothetical protein PHAVU_008G234400g, partial [... 90 4e-16
gb|ESW13884.1| hypothetical protein PHAVU_008G234400g [Phaseolus... 90 4e-16
ref|XP_003544264.2| PREDICTED: double-stranded RNA-binding prote... 89 8e-16
ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding prote... 87 3e-15
ref|XP_004490868.1| PREDICTED: double-stranded RNA-binding prote... 86 4e-15
ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257... 85 1e-14
ref|XP_002532469.1| double-stranded RNA binding protein, putativ... 84 3e-14
ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago ... 83 3e-14
ref|XP_006602423.1| PREDICTED: double-stranded RNA-binding prote... 83 4e-14
>gb|ESW13886.1| hypothetical protein PHAVU_008G234500g [Phaseolus vulgaris]
Length = 365
Score = 103 bits (258), Expect = 2e-20
Identities = 51/96 (53%), Positives = 73/96 (76%), Gaps = 1/96 (1%)
Frame = +1
Query: 1 QKKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQ 180
QKKAAEQ+A++ AL+ L+K +++G S++S+ + CK+I+NE+A+KL +E P YNTVQ Q
Sbjct: 93 QKKAAEQEASRLALEITLQKTRDEGPSLVSQISPFCKSIINEYASKLHIEGPSYNTVQQQ 152
Query: 181 Q-VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAH 285
Q LP+F ++L F SYTG PARTKK+AE+ AH
Sbjct: 153 QGGVLPVFTTSLVFNGTSYTGDPARTKKEAEQSAAH 188
>ref|XP_006482141.1| PREDICTED: double-stranded RNA-binding protein 4-like [Citrus
sinensis]
Length = 420
Score = 102 bits (255), Expect = 4e-20
Identities = 51/96 (53%), Positives = 73/96 (76%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD AK AL+CI +K +++G +I+++T+ CK+ILNEFA K+ LE P Y+T Q +
Sbjct: 125 RKAAEQDVAKIALECISKKIKDEGCPLINQDTVFCKSILNEFAVKMNLELPAYSTRQSEA 184
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+FVS+L F V+YTG P R+KK+AE+L A V
Sbjct: 185 L-LPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAV 219
>ref|XP_006430634.1| hypothetical protein CICLE_v10011836mg [Citrus clementina]
gi|557532691|gb|ESR43874.1| hypothetical protein
CICLE_v10011836mg [Citrus clementina]
Length = 348
Score = 102 bits (255), Expect = 4e-20
Identities = 51/96 (53%), Positives = 73/96 (76%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD AK AL+CI +K +++G +I+++T+ CK+ILNEFA K+ LE P Y+T Q +
Sbjct: 53 RKAAEQDVAKIALECISKKIKDEGCPLINQDTVFCKSILNEFAVKMNLELPAYSTRQSEA 112
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+FVS+L F V+YTG P R+KK+AE+L A V
Sbjct: 113 L-LPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAV 147
>ref|XP_006430633.1| hypothetical protein CICLE_v10011836mg [Citrus clementina]
gi|557532690|gb|ESR43873.1| hypothetical protein
CICLE_v10011836mg [Citrus clementina]
Length = 418
Score = 102 bits (255), Expect = 4e-20
Identities = 51/96 (53%), Positives = 73/96 (76%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD AK AL+CI +K +++G +I+++T+ CK+ILNEFA K+ LE P Y+T Q +
Sbjct: 123 RKAAEQDVAKIALECISKKIKDEGCPLINQDTVFCKSILNEFAVKMNLELPAYSTRQSEA 182
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+FVS+L F V+YTG P R+KK+AE+L A V
Sbjct: 183 L-LPVFVSSLVFNGVTYTGEPGRSKKEAEQLAARAV 217
>ref|XP_004490867.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X1
[Cicer arietinum]
Length = 384
Score = 102 bits (255), Expect = 4e-20
Identities = 52/93 (55%), Positives = 71/93 (76%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQDA+K AL+C+ K +E+ S +S+N I+CK +LNE+AAKL E P YNTVQ+Q+
Sbjct: 79 RKAAEQDASKLALECLTRKIKEEVYSFVSENAIICKQVLNEYAAKLNKELPTYNTVQLQE 138
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
V +P+FV T++F SYTG AR+KKDA+ L A
Sbjct: 139 V-VPVFVCTVDFIGSSYTGDVARSKKDAKLLAA 170
>gb|EOY03977.1| DsRNA-binding domain-like superfamily protein, putative [Theobroma
cacao]
Length = 311
Score = 100 bits (250), Expect = 2e-19
Identities = 49/93 (52%), Positives = 70/93 (75%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQDAAK AL CI +K +++G II ++T+ CK+ILNEFA K+ +E P YNT+Q +
Sbjct: 82 RKAAEQDAAKVALDCITKKIKDEGCPIIREDTVFCKSILNEFAVKMNMEMPSYNTIQSEG 141
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
+ +P+FVS+L F V+Y+G R KK+AE+L A
Sbjct: 142 L-IPLFVSSLVFNDVTYSGKTGRNKKEAEQLAA 173
>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
product [Vitis vinifera]
Length = 333
Score = 97.1 bits (240), Expect = 2e-18
Identities = 49/96 (51%), Positives = 70/96 (72%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD A+ AL+ I +K +++G +I ++T+ CK+ILNEFA K+ LE+P Y TVQ +
Sbjct: 74 RKAAEQDVARLALEFISKKIKDEGCPLIREDTVFCKSILNEFAVKMNLEKPTYTTVQPEG 133
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+FVS+L F V+YTG R KK+AE+L A V
Sbjct: 134 L-LPVFVSSLVFNGVTYTGDAGRNKKEAEQLAARTV 168
>ref|XP_006383311.1| hypothetical protein POPTR_0005s14370g [Populus trichocarpa]
gi|550338918|gb|ERP61108.1| hypothetical protein
POPTR_0005s14370g [Populus trichocarpa]
Length = 470
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD A AL+ IL++ +++G ++ +T+ CK+ILNEFA K+ E+P YNTVQ
Sbjct: 191 RKAAEQDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPG 250
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+F+STL F VSYTG R KK+AE+L A V
Sbjct: 251 L-LPVFISTLVFDGVSYTGDAGRNKKEAEQLAARAV 285
>ref|XP_002302963.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQD A AL+ IL++ +++G ++ +T+ CK+ILNEFA K+ E+P YNTVQ
Sbjct: 191 RKAAEQDVANLALESILKRVKDEGCPLLLGDTVFCKSILNEFAVKVNREKPTYNTVQSPG 250
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
+ LP+F+STL F VSYTG R KK+AE+L A V
Sbjct: 251 L-LPVFISTLVFDGVSYTGDAGRNKKEAEQLAARAV 285
>gb|EXB57534.1| Double-stranded RNA-binding protein 4 [Morus notabilis]
Length = 428
Score = 90.9 bits (224), Expect = 2e-16
Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 8/103 (7%)
Frame = +1
Query: 7 KAAEQDAAKYALKCILEKRQEKGSS--------IISKNTILCKAILNEFAAKLQLERPKY 162
KAAEQD AK K I +K+ + G +I K+T+ CK+ILNEFA K+ +E P Y
Sbjct: 128 KAAEQDVAKLTPKYISQKKHDDGFPWGFPDALPLIHKDTVFCKSILNEFATKMNMEMPTY 187
Query: 163 NTVQMQQVPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
NT++ + + LP+F S+L F VSYTGG + KK+AERLVA +
Sbjct: 188 NTIKPEGL-LPVFNSSLVFNGVSYTGGAGKNKKEAERLVARTI 229
>gb|EXB85835.1| Double-stranded RNA-binding protein 4 [Morus notabilis]
Length = 750
Score = 89.7 bits (221), Expect = 4e-16
Identities = 48/104 (46%), Positives = 68/104 (65%), Gaps = 8/104 (7%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSS--------IISKNTILCKAILNEFAAKLQLERPK 159
+KAAEQD A+ ALK I +K+ + G +I K+T+ CK+ILNEFA K+ +E P
Sbjct: 128 RKAAEQDVAELALKYISQKKPDDGFPRGFPDALPLIHKDTVFCKSILNEFATKMSMEMPT 187
Query: 160 YNTVQMQQVPLPIFVSTLEFRCVSYTGGPARTKKDAERLVAHDV 291
YNT++ + + LP+F S+L F SYTGG + KK+AE+L A V
Sbjct: 188 YNTIKPEGL-LPVFNSSLVFNGASYTGGAGKNKKEAEQLAARTV 230
>gb|ESW13885.1| hypothetical protein PHAVU_008G234400g, partial [Phaseolus
vulgaris]
Length = 292
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+K AEQDAA+ A++C+ ++ +++ S+ + + CK+ILNE+A KL+LE P Y TVQ Q+
Sbjct: 122 RKTAEQDAARLAMECLPKRTRDEAPSLDCEISAFCKSILNEYATKLKLEGPTYKTVQ-QE 180
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LP F+S+L F SYTG AR KKDAE+L A
Sbjct: 181 GLLPSFISSLVFNGTSYTGDAARNKKDAEQLAA 213
>gb|ESW13884.1| hypothetical protein PHAVU_008G234400g [Phaseolus vulgaris]
Length = 223
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/93 (49%), Positives = 66/93 (70%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+K AEQDAA+ A++C+ ++ +++ S+ + + CK+ILNE+A KL+LE P Y TVQ Q+
Sbjct: 53 RKTAEQDAARLAMECLPKRTRDEAPSLDCEISAFCKSILNEYATKLKLEGPTYKTVQ-QE 111
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LP F+S+L F SYTG AR KKDAE+L A
Sbjct: 112 GLLPSFISSLVFNGTSYTGDAARNKKDAEQLAA 144
>ref|XP_003544264.2| PREDICTED: double-stranded RNA-binding protein 6-like [Glycine max]
Length = 459
Score = 88.6 bits (218), Expect = 8e-16
Identities = 46/94 (48%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQ- 180
KKAAE +AA+ AL+ IL++ +++G S++++ + K+I+NE+A KL +E+P YNT Q Q
Sbjct: 78 KKAAEHEAARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQL 137
Query: 181 QVPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LPIF+++L F SYTG PARTKK+AE+ A
Sbjct: 138 GGVLPIFITSLVFNGTSYTGDPARTKKEAEQSAA 171
>ref|XP_006357775.1| PREDICTED: double-stranded RNA-binding protein 4-like [Solanum
tuberosum]
Length = 355
Score = 86.7 bits (213), Expect = 3e-15
Identities = 46/92 (50%), Positives = 62/92 (67%)
Frame = +1
Query: 7 KAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQV 186
KAAEQDAAK AL + EK + +G +I ++T+ CK+ILNE+A K+ LE+P Y T Q V
Sbjct: 101 KAAEQDAAKVALIGVKEKLKHEGCPLIREDTVFCKSILNEYAVKMNLEKPTYQTSQTVAV 160
Query: 187 PLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LP+F ST F + YTG + KK+AE+L A
Sbjct: 161 -LPVFKSTSFFNGIHYTGEIGKNKKEAEQLAA 191
>ref|XP_004490868.1| PREDICTED: double-stranded RNA-binding protein 1-like isoform X2
[Cicer arietinum]
Length = 377
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQDA+K AL+C+ K +E+ S +S+ +LNE+AAKL E P YNTVQ+Q+
Sbjct: 79 RKAAEQDASKLALECLTRKIKEEVYSFVSE-------VLNEYAAKLNKELPTYNTVQLQE 131
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
V +P+FV T++F SYTG AR+KKDA+ L A
Sbjct: 132 V-VPVFVCTVDFIGSSYTGDVARSKKDAKLLAA 163
>ref|XP_004231990.1| PREDICTED: uncharacterized protein LOC101257125 [Solanum
lycopersicum]
Length = 403
Score = 84.7 bits (208), Expect = 1e-14
Identities = 45/92 (48%), Positives = 61/92 (66%)
Frame = +1
Query: 7 KAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQV 186
KAAE DAAK AL + EK + +G +I ++T+ CK+ILNE+A K+ LE+P Y T Q V
Sbjct: 147 KAAEHDAAKVALIGVKEKLKHEGCPLIREDTVFCKSILNEYAVKMNLEKPTYQTSQSVAV 206
Query: 187 PLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LP+F ST F + YTG + KK+AE+L A
Sbjct: 207 -LPVFKSTSFFNGIHYTGEIGKNKKEAEQLAA 237
>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
gi|223527827|gb|EEF29925.1| double-stranded RNA binding
protein, putative [Ricinus communis]
Length = 289
Score = 83.6 bits (205), Expect = 3e-14
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQE--KGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQM 177
+K AEQD AK AL I EK ++ K ++T+ CK+ILNE+A K+QLE P YNTV+
Sbjct: 65 RKEAEQDVAKLALTSITEKIKDEIKDEKFTHEDTVACKSILNEYAVKMQLEMPTYNTVK- 123
Query: 178 QQVPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
Q PIFVS+ F V+Y G RTKK+AE+L A
Sbjct: 124 QGGLFPIFVSSSVFNGVTYNGDIGRTKKEAEQLAA 158
>ref|XP_003616374.1| hypothetical protein MTR_5g079490 [Medicago truncatula]
gi|355517709|gb|AES99332.1| hypothetical protein
MTR_5g079490 [Medicago truncatula]
Length = 357
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/93 (44%), Positives = 64/93 (68%)
Frame = +1
Query: 4 KKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNTVQMQQ 183
+KAAEQ+ A++AL+ + +K +++ SI+S+ CK +LNE+A+KL ++ P Y +V+ ++
Sbjct: 79 RKAAEQEVARFALEYLTKKVKDEAYSIMSEAVTFCKTVLNEYASKLSIQLPTYKSVEYKE 138
Query: 184 VPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
V +P FV TL+ SYTG AR KKDA L A
Sbjct: 139 V-IPYFVCTLDLNGTSYTGDAARRKKDAVELAA 170
>ref|XP_006602423.1| PREDICTED: double-stranded RNA-binding protein 4-like isoform X1
[Glycine max] gi|571545999|ref|XP_006602424.1|
PREDICTED: double-stranded RNA-binding protein 4-like
isoform X2 [Glycine max]
Length = 203
Score = 82.8 bits (203), Expect = 4e-14
Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +1
Query: 1 QKKAAEQDAAKYALKCILEKRQEKGSSIISKNTILCKAILNEFAAKLQLERPKYNT-VQM 177
QKK EQD A+ AL+ IL + +++G S++ + + + K+I+NE+A KL +E+P YN Q+
Sbjct: 50 QKKVVEQDVARLALEGILHRTRDEGLSLVDQISPIFKSIMNEYAHKLHVEQPTYNNDKQL 109
Query: 178 QQVPLPIFVSTLEFRCVSYTGGPARTKKDAERLVA 282
LP F+++L F SYTGGPA TKKD E+ A
Sbjct: 110 LGGVLPAFITSLVFNGTSYTGGPAGTKKDVEQSAA 144