BLASTX nr result

ID: Rheum21_contig00004132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00004132
         (693 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840889.1| hypothetical protein AMTR_s00087p00057840 [A...    59   1e-06

>ref|XP_006840889.1| hypothetical protein AMTR_s00087p00057840 [Amborella trichopoda]
            gi|548842744|gb|ERN02564.1| hypothetical protein
            AMTR_s00087p00057840 [Amborella trichopoda]
          Length = 1207

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
 Frame = -1

Query: 657  SREVEKNLSGSTPTVAQSDDQMNDKVEVQR-------DDEHV--------FDHSEASVFK 523
            SRE +K  S +   V  S   + D+ EV         DD  V         D +E +   
Sbjct: 757  SREGQK--SSAAAMVTDSSGPVADETEVTAPSLSKDVDDAEVTAPSLSKDVDDAEVTAPS 814

Query: 522  L-QDSETEVND-------LGSSNQIVG-----GECVNLLGTAV-ISGTDINANMTEDTHF 385
            L +D ++EV+D       + S+  I+      GE  N+ G +V + G + +A++++  + 
Sbjct: 815  LSKDLDSEVDDGLETHSKITSAESILSAISPLGEKYNVSGNSVAVDGLESSASVSDKVNV 874

Query: 384  --EENCVHKASDSDDVNLLNNAMNHDAQQDENEVFEDAKELQSFDEKVSGEE-------- 235
              E N     SDS  V+L+        + D  E     KEL    +K S E         
Sbjct: 875  STERNPEDAVSDSSAVDLMVGP-----RLDNGESISSTKELSEISKKASQESHSEVIAVN 929

Query: 234  ---CSGKVDLGLISDNDDDIDLAQNTANKTEAGVHVSAVSAIEERSTEMKDGCGSGVPVQ 64
               CS  + +   +   D + LA   A  +  G + SA + +++ S  +        P  
Sbjct: 930  NPVCSVTLAVEGKATESDRVGLAGTHAQVSREGQNSSAAAMVKDSSGPVAGEAEVTAPSL 989

Query: 63   ELDVQVDSVSQTDSLEGNWGS 1
              DV +DS SQTDSLEG WGS
Sbjct: 990  SKDVSLDSTSQTDSLEGQWGS 1010


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