BLASTX nr result
ID: Rheum21_contig00003974
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00003974
(765 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004495141.1| PREDICTED: photosystem II reaction center W ... 136 9e-30
gb|AFK39129.1| unknown [Lotus japonicus] gi|388511197|gb|AFK4366... 135 1e-29
gb|AFK35192.1| unknown [Medicago truncatula] 134 3e-29
ref|NP_001236406.1| uncharacterized protein LOC100499815 [Glycin... 130 6e-28
ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycin... 128 2e-27
ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycin... 127 3e-27
gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus... 127 5e-27
ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Popu... 127 5e-27
sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction cen... 126 9e-27
ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycin... 126 9e-27
ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr... 125 1e-26
gb|ESW16689.1| hypothetical protein PHAVU_007G177300g [Phaseolus... 123 6e-26
gb|ACJ84151.1| unknown [Medicago truncatula] 123 6e-26
ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Popu... 122 1e-25
ref|XP_006349749.1| PREDICTED: photosystem II reaction center W ... 120 4e-25
gb|AFK35407.1| unknown [Medicago truncatula] 120 4e-25
ref|XP_002282059.1| PREDICTED: photosystem II reaction center W ... 120 5e-25
ref|XP_004247215.1| PREDICTED: photosystem II reaction center W ... 120 7e-25
ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 119 1e-24
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 119 1e-24
>ref|XP_004495141.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Cicer arietinum]
Length = 138
Score = 136 bits (342), Expect = 9e-30
Identities = 78/125 (62%), Positives = 88/125 (70%), Gaps = 16/125 (12%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI+AT+ ++ I L SSSPVLGLP M +VGRVRCSME K S+ +K
Sbjct: 1 MATISATTTTASIARACIAQKRPLAVSSSPVLGLPRMTKVGRVRCSMEGKTSSVEKNNNS 60
Query: 412 ----GASLMVVAT-TAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSF 248
GASL+ A AM SPAA+ALVDERMSTEGTGLPFGLSN LLGWIL GVF LIW+
Sbjct: 61 KMGMGASLVAAACGAAMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWAL 120
Query: 247 YFIYA 233
YFIYA
Sbjct: 121 YFIYA 125
>gb|AFK39129.1| unknown [Lotus japonicus] gi|388511197|gb|AFK43660.1| unknown
[Lotus japonicus]
Length = 136
Score = 135 bits (341), Expect = 1e-29
Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 14/123 (11%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI+AT + I L SSSPVLGLP + +VGRVRCSME KPS Q+
Sbjct: 1 MATISATITTPSITRAGLVQKRPLVISSSPVLGLPALAKVGRVRCSMEGKPSGQESSSKM 60
Query: 412 --GASLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYF 242
GASLM A+ A M SPAA+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ YF
Sbjct: 61 GMGASLMAAASAAAMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWAVYF 120
Query: 241 IYA 233
+YA
Sbjct: 121 VYA 123
>gb|AFK35192.1| unknown [Medicago truncatula]
Length = 137
Score = 134 bits (337), Expect = 3e-29
Identities = 75/124 (60%), Positives = 86/124 (69%), Gaps = 15/124 (12%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI+AT+ ++ I L SSSPVLGLP M +VGRVRCSME KPS+ +
Sbjct: 1 MATISATTTTASITRACLAQKRPLSVSSSPVLGLPTMAKVGRVRCSMEGKPSSVSESNSN 60
Query: 412 ---GASLMVVA-TTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFY 245
G+SL A AM SPAA+ALVDERMSTEGTGLPFGLSN LLGW+L GVF IW+ Y
Sbjct: 61 IGMGSSLFAAACAAAMSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGFIWALY 120
Query: 244 FIYA 233
FIYA
Sbjct: 121 FIYA 124
>ref|NP_001236406.1| uncharacterized protein LOC100499815 [Glycine max]
gi|255626853|gb|ACU13771.1| unknown [Glycine max]
Length = 133
Score = 130 bits (326), Expect = 6e-28
Identities = 69/114 (60%), Positives = 79/114 (69%), Gaps = 7/114 (6%)
Frame = -3
Query: 556 ATITATSLSSPILELRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK-------GASLM 398
A IT S+S L + SSPVLGLP M +VGRV CSME KP + K+ GASLM
Sbjct: 6 AAITTPSISRATLVQKRVSSPVLGLPAMGKVGRVSCSMEEKPYSVKESSSSMLGMGASLM 65
Query: 397 VVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
A+ A S A+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ YF+Y
Sbjct: 66 AAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVY 119
>ref|NP_001236684.1| uncharacterized protein LOC100305788 [Glycine max]
gi|255626603|gb|ACU13646.1| unknown [Glycine max]
Length = 136
Score = 128 bits (321), Expect = 2e-27
Identities = 70/117 (59%), Positives = 81/117 (69%), Gaps = 10/117 (8%)
Frame = -3
Query: 556 ATITATSLSSPILELRAS---SSPVLGLPMMKRVGRVRCSMEAKPSTQKKK-------GA 407
A IT S++ L + S SSPVLGLP M +VGRV CSME KPS+ K+ GA
Sbjct: 6 AAITTPSITRACLVQKRSLGFSSPVLGLPAMGKVGRVSCSMEEKPSSVKESSSSMLGMGA 65
Query: 406 SLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
SLM A+ A S A+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ YF+Y
Sbjct: 66 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVY 122
>ref|NP_001235636.1| uncharacterized protein LOC100306223 [Glycine max]
gi|255627917|gb|ACU14303.1| unknown [Glycine max]
Length = 132
Score = 127 bits (320), Expect = 3e-27
Identities = 69/115 (60%), Positives = 81/115 (70%), Gaps = 6/115 (5%)
Frame = -3
Query: 559 MATITATSLSSPILELR----ASSSPVLGLPMMKRVGRVRCSMEAKPSTQKK--KGASLM 398
+A I TS++ L L+ ASSS VLGLP M + G+VRCSME KPS+ GASL+
Sbjct: 5 IAGIPTTSITRAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLL 64
Query: 397 VVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIYA 233
A A S A+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ YF+YA
Sbjct: 65 AAAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYA 119
>gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris]
Length = 135
Score = 127 bits (318), Expect = 5e-27
Identities = 72/121 (59%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Frame = -3
Query: 559 MATITA----TSLSSPILELR----ASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI A TS+S L L+ SSS VLGLP M R G+VRCSM+ KPS Q+
Sbjct: 1 MATIIAGSPTTSISRSGLVLKRPFGVSSSTVLGLPAMSRAGKVRCSMDEKPSVQENSSNV 60
Query: 412 --GASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFI 239
GASL+ A A S A+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ YF+
Sbjct: 61 GMGASLLAAACAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFV 120
Query: 238 Y 236
Y
Sbjct: 121 Y 121
>ref|XP_002307627.1| hypothetical protein POPTR_0005s24030g [Populus trichocarpa]
gi|118486017|gb|ABK94852.1| unknown [Populus
trichocarpa] gi|222857076|gb|EEE94623.1| hypothetical
protein POPTR_0005s24030g [Populus trichocarpa]
Length = 134
Score = 127 bits (318), Expect = 5e-27
Identities = 74/120 (61%), Positives = 82/120 (68%), Gaps = 12/120 (10%)
Frame = -3
Query: 559 MATITATSLSSPIL---------ELRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKK-KG 410
MATITA++ ++ L L S SPVLGLP M + GRV CSME KPS ++K KG
Sbjct: 1 MATITASTTTTSSLVRAALVHKPSLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKG 60
Query: 409 --ASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
ASLM A S ALALVDERMSTEGTGLPFGLSN LL WILLGVFALIW+ YF Y
Sbjct: 61 MSASLMAAVCAASMSSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTY 120
>sp|Q41387.1|PSBW_SPIOL RecName: Full=Photosystem II reaction center W protein,
chloroplastic; AltName: Full=PSII 6.1 kDa protein;
Flags: Precursor gi|728716|emb|CAA59409.1| protein of
photosystem II [Spinacia oleracea]
Length = 137
Score = 126 bits (316), Expect = 9e-27
Identities = 70/124 (56%), Positives = 82/124 (66%), Gaps = 15/124 (12%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPST------- 425
MATITA+S +S + + SSSP+LGLP M + +V CS+E KPST
Sbjct: 1 MATITASSSASLVARASLVHNSRVGVSSSPILGLPSMTKRSKVTCSIENKPSTTETTTTT 60
Query: 424 QKKKGASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFY 245
K GASL+ A A S A+ALVDERMSTEGTGLPFGLSN LLGWIL GVF LIW+ Y
Sbjct: 61 NKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWALY 120
Query: 244 FIYA 233
F+YA
Sbjct: 121 FVYA 124
>ref|NP_001236601.1| uncharacterized protein LOC100526966 [Glycine max]
gi|255631268|gb|ACU16001.1| unknown [Glycine max]
Length = 133
Score = 126 bits (316), Expect = 9e-27
Identities = 71/119 (59%), Positives = 83/119 (69%), Gaps = 11/119 (9%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKK--KG 410
MATI A + ++ I + ASSS VLGLP M + GRVRCSME KPS+ G
Sbjct: 1 MATIIAGTPTTSITRTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMG 60
Query: 409 ASLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
ASL+ A A M SPAA+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ +F+Y
Sbjct: 61 ASLLAAAAAATMSSPAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVY 119
>ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina]
gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like [Citrus
sinensis] gi|557546174|gb|ESR57152.1| hypothetical
protein CICLE_v10024455mg [Citrus clementina]
Length = 135
Score = 125 bits (315), Expect = 1e-26
Identities = 73/122 (59%), Positives = 81/122 (66%), Gaps = 13/122 (10%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MA ITA+ +S I + ASSSPVLGLP M G+VRCSME KPS Q+ K
Sbjct: 1 MAAITASVGTSSITRSVLVHKPSIVASSSPVLGLPAMAVKGKVRCSMEEKPSKQESKTNV 60
Query: 412 --GASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFI 239
ASL+ A A S A+ALVDERMSTEGTGLPFGLSN LLGWILLGVF LIW+ Y
Sbjct: 61 GMSASLLAAACAATMSSPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIP 120
Query: 238 YA 233
YA
Sbjct: 121 YA 122
>gb|ESW16689.1| hypothetical protein PHAVU_007G177300g [Phaseolus vulgaris]
Length = 134
Score = 123 bits (309), Expect = 6e-26
Identities = 67/120 (55%), Positives = 79/120 (65%), Gaps = 12/120 (10%)
Frame = -3
Query: 559 MATITATSLSSPILEL-------RASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK---- 413
MATI+A + + I SSPVLGLP M +VGRVRCSME KP ++
Sbjct: 1 MATISAATTTPSITRACLVQKRPLGVSSPVLGLPTMGKVGRVRCSMEEKPCVKESSSSMG 60
Query: 412 -GASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
GASLM A+ S A+ALVDER+STEGTGLPFGLSN LLGWIL GVF LIW+ +F+Y
Sbjct: 61 MGASLMAATCAAVMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVY 120
>gb|ACJ84151.1| unknown [Medicago truncatula]
Length = 136
Score = 123 bits (309), Expect = 6e-26
Identities = 70/123 (56%), Positives = 83/123 (67%), Gaps = 14/123 (11%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI A + +S I+ L SS V+GLP + +VGRVRCS+E KP Q
Sbjct: 1 MATIIAGTSTSSIIRTSFVHKQPLGVSSHTVVGLPSIAKVGRVRCSIEGKPDVQGSSSNI 60
Query: 412 --GASLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYF 242
GASL+ + A + SPAA+ALVDERMSTEGTGLPFGLSN LLGW+L GVF LIW+ YF
Sbjct: 61 GMGASLIAAISAATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYF 120
Query: 241 IYA 233
IYA
Sbjct: 121 IYA 123
>ref|XP_002300801.2| hypothetical protein POPTR_0002s04520g [Populus trichocarpa]
gi|118489315|gb|ABK96462.1| unknown [Populus trichocarpa
x Populus deltoides] gi|550344272|gb|EEE80074.2|
hypothetical protein POPTR_0002s04520g [Populus
trichocarpa]
Length = 133
Score = 122 bits (306), Expect = 1e-25
Identities = 68/119 (57%), Positives = 81/119 (68%), Gaps = 11/119 (9%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATITA++ +S I+ + SSS VLGLP + + G+V CSME KP+ ++K
Sbjct: 1 MATITASTATSSIVRAALAHRPSVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGM 60
Query: 412 GASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
ASLM A S ALALVDER+STEGTGLPFGLSN LL WILLGVFA IWS YF+Y
Sbjct: 61 SASLMAAVCAATISSPALALVDERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVY 119
>ref|XP_006349749.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 120 bits (302), Expect = 4e-25
Identities = 69/118 (58%), Positives = 81/118 (68%), Gaps = 10/118 (8%)
Frame = -3
Query: 559 MATITATSLSSPI----LELRAS---SSPVLGLPMMKRVGRVRCSMEAKPSTQKK--KGA 407
MATITA + +S + L R S +S +LGLP M + G+V+CSME KP + K G
Sbjct: 1 MATITACTTTSSVARAALVQRGSVSRTSTILGLPSMSKGGKVKCSMEGKPKGESKLGMGE 60
Query: 406 SLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
SLM A A M +P A+ALVDERMSTEGTGLPFGLSN LLGWIL GVF LIWS Y +Y
Sbjct: 61 SLMAAAVAASMSNPVAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLYTVY 118
>gb|AFK35407.1| unknown [Medicago truncatula]
Length = 136
Score = 120 bits (302), Expect = 4e-25
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 14/123 (11%)
Frame = -3
Query: 559 MATITATSLSSPILE--------LRASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MATI A + +S I+ L SS V+GLP + +VGRV CS+E KP Q
Sbjct: 1 MATIIAGTSTSSIIRTSFVHKQPLGVSSHTVVGLPSIAKVGRVGCSIEGKPDVQGSSSNI 60
Query: 412 --GASLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYF 242
GASL+ + A + SPAA+ALVDERMSTEGTGLPFGLSN LLGW+L GVF LIW+ YF
Sbjct: 61 GMGASLIAAISAATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYF 120
Query: 241 IYA 233
IYA
Sbjct: 121 IYA 123
>ref|XP_002282059.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
[Vitis vinifera] gi|297735504|emb|CBI17944.3| unnamed
protein product [Vitis vinifera]
Length = 135
Score = 120 bits (301), Expect = 5e-25
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Frame = -3
Query: 559 MATITATSLSS--PILELR------ASSSPVLGLPMMKRVGRVRCSMEAKPSTQKKK--- 413
MA+ITA++ +S P + LR +SS +LGLP+M + GRV CSM+ KPS +
Sbjct: 1 MASITASTPTSSLPRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKM 60
Query: 412 --GASLMVVATTAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFI 239
GASLM A A S A+ALVDERMSTEGTGLPFGLSN LGWIL GVF LIW+ YF+
Sbjct: 61 GMGASLMAAACAATMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFV 120
Query: 238 Y 236
Y
Sbjct: 121 Y 121
>ref|XP_004247215.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 132
Score = 120 bits (300), Expect = 7e-25
Identities = 71/118 (60%), Positives = 81/118 (68%), Gaps = 10/118 (8%)
Frame = -3
Query: 559 MATITATSLSSPI----LELRAS---SSPVLGLPMMKRVGRVRCSMEAKPSTQKK--KGA 407
MATITA + +S + L R S +S VLGLP M + G+V+CSME K + K G
Sbjct: 1 MATITACTTTSSVARAALVQRGSVSRTSVVLGLPSMSKGGKVKCSMEGKGKGESKLGMGE 60
Query: 406 SLMVVATTA-MWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
SLM A A M SP A+ALVDERMSTEGTGLPFGLSN LLGWILLGVF LIWS Y +Y
Sbjct: 61 SLMAAAVAASMSSPVAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSLYTVY 118
>ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
gi|557111329|gb|ESQ51613.1| hypothetical protein
EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 119 bits (298), Expect = 1e-24
Identities = 70/119 (58%), Positives = 82/119 (68%), Gaps = 11/119 (9%)
Frame = -3
Query: 559 MATITAT----SLSSPILELR---ASSSPVLGLP-MMKRVGRVRCSMEAKPSTQKKKGAS 404
MA+ TA+ S++ P L L+ A S+PVLGLP M KR G VRCSME K GA
Sbjct: 1 MASFTASASTISVARPALLLKPTVAVSTPVLGLPPMSKRKGGVRCSMEKKQENVSVVGAG 60
Query: 403 LMVVAT---TAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
+ AT TA+ S A+ALVD+RMSTEGTGLPFGLSN LLGWIL GVF LIW+FYF+Y
Sbjct: 61 VSAAATAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVY 119
>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Brassica rapa]
Length = 133
Score = 119 bits (298), Expect = 1e-24
Identities = 68/114 (59%), Positives = 79/114 (69%), Gaps = 7/114 (6%)
Frame = -3
Query: 556 ATITATSLSSPILELR---ASSSPVLGLPMM-KRVGRVRCSMEAKPSTQKKKGASLMVVA 389
A+ + S++ P L L+ A S+PVLGLP M KR G VRCSME K GA + A
Sbjct: 6 ASASTVSVARPALLLKPTVAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAA 65
Query: 388 T---TAMWSPAALALVDERMSTEGTGLPFGLSNGLLGWILLGVFALIWSFYFIY 236
T TA+ S A+ALVD+RMSTEGTGLPFGLSN LLGWILLGVF LIW+FYF Y
Sbjct: 66 TAALTAVMSNPAMALVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTY 119