BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00003296
         (3232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...  1348   0.0  
ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1338   0.0  
ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1338   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...  1338   0.0  
ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1320   0.0  
ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1319   0.0  
ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1316   0.0  
ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1316   0.0  
ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus...  1316   0.0  
gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]                1316   0.0  
ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1315   0.0  
ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1311   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1307   0.0  
gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus...  1301   0.0  
ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1288   0.0  
ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [A...  1269   0.0  
ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Caps...  1267   0.0  
ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana] gi|...  1258   0.0  
ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabido...  1252   0.0  
ref|XP_006407519.1| hypothetical protein EUTSA_v10020005mg [Eutr...  1242   0.0  

>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score = 1348 bits (3490), Expect = 0.0
 Identities = 680/858 (79%), Positives = 769/858 (89%), Gaps = 3/858 (0%)
 Frame = +2

Query: 317  DGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 496
            D +GNGS+ +K+K  G DG RIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR
Sbjct: 61   DEEGNGSLVLKEK-DGRDG-RIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHR 118

Query: 497  RILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLINGH 676
            RILFAMHELGLSSRKP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLI GH
Sbjct: 119  RILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGH 178

Query: 677  GNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSXXXXXXXX 856
            GNFGS+DADPPAAMRYTECR               +TVDF+PNFDNSQKEPS        
Sbjct: 179  GNFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPT 238

Query: 857  XXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGVIMG 1036
                GSSGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLEYMPGPDFPTGG+IMG
Sbjct: 239  LLLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMG 298

Query: 1037 NMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKIAELVEAK 1216
            N+GIL+AYR+GRGRI++RGKT++E++DS+TKR A+IIKEIPYQTNK+SLVEKIAELVE K
Sbjct: 299  NIGILEAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENK 358

Query: 1217 SLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGILNGQPKL 1396
            SL+GISDIRDESDRSGMRIVIELKRGS+PSIVLN LYR TALQ+SFSCNM+GIL+GQPKL
Sbjct: 359  SLDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKL 418

Query: 1397 MGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVVKSASNNA 1576
            MGL+ELL+AFLDFRCSVVERRA+FKLSQAQ+RRHIVEG++VGLDNLD VI+V+K A +NA
Sbjct: 419  MGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNA 478

Query: 1577 TAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQI 1756
             A+  L  E+ LS++QAEAILDISLR++T LER KF+ E KSL EQIS+L+ELLSS+KQI
Sbjct: 479  MASTGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQI 538

Query: 1757 LQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDVF 1936
            LQ+IEQEA+ELK++FSTPR+SMLED+D G LED+DVIPNE+M+LAVSEKGYVKRMKP+ F
Sbjct: 539  LQLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLAVSEKGYVKRMKPNTF 598

Query: 1937 NLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAAGT 2116
            NLQNRGTIGKSVGKLRVND MSDFIVCHAHD++LYFSD+G V+SARA+KIPECTRTAAGT
Sbjct: 599  NLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHSARAYKIPECTRTAAGT 658

Query: 2117 PLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQLV 2296
            PLVQIL LSDGERITSIIPVS+F + Q+L+MLT NGYIKKV LN FSSIR TGIIAIQLV
Sbjct: 659  PLVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQLV 718

Query: 2297 PGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASIDV 2476
            PGDELKWVRCCT+DDLVAMASQNGM +LSSC  IR+ GRNTRG +AMRLK+GD MAS+D+
Sbjct: 719  PGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMDI 778

Query: 2477 IPAAMRKNLELGSEAHSSR---LSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGYKF 2647
            IPAA+RK+LE   E   SR   L+GPWLLFVSESG GKRVPLSRFR+S  NRVGLIGYKF
Sbjct: 779  IPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYKF 838

Query: 2648 AAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDH 2827
            +AED L AVFVVG+S+++DGESDEQ+VLVSQSGT+NRIKV DISIQSR+ARGVILMRL++
Sbjct: 839  SAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTINRIKVWDISIQSRFARGVILMRLEY 898

Query: 2828 AGKIQSASLMSASEPDTE 2881
            AGKIQSASLMSA+E +T+
Sbjct: 899  AGKIQSASLMSATETETD 916


>ref|XP_006347708.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X3 [Solanum tuberosum]
          Length = 957

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 682/933 (73%), Positives = 788/933 (84%), Gaps = 16/933 (1%)
 Frame = +2

Query: 131  MAFSTGFRLCRSYYSRISYPVLRPDIRFS-------DIRFLSXXXXXXXXXXXXXXXXKA 289
            MAFSTG RL R Y+   ++  +    RFS       ++RFLS                K 
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAIPS--RFSGLRRASSELRFLSSVTPPRKQVRPVSARRK- 74

Query: 290  GGNIEAEPQDGDGNGSVTIKDK------ASGNDGERIVPTELHKEATEAYMAYAMSVLLG 451
               +  E    +GNGSV ++D+        G  GERIV TELHKEATEAYM+YAMSVLLG
Sbjct: 75   ---VTEEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLG 131

Query: 452  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 631
            RALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYDSLVR
Sbjct: 132  RALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVR 191

Query: 632  MAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFD 811
            MAQDFSLR PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFD
Sbjct: 192  MAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFD 251

Query: 812  NSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 991
            NSQKEPS            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE
Sbjct: 252  NSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLE 311

Query: 992  YMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTN 1171
            YMPGPDFPTGG+IMGN+GIL+AYR+GRGR+V+RGKTDIE++D++TKRAAIII+EIPYQTN
Sbjct: 312  YMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTN 371

Query: 1172 KASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTS 1351
            KASLVEKIA+LVE K+LEG+SDIRDESDRSGMR+VIELKRGS+P+IVLNNLYR TALQ+S
Sbjct: 372  KASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSS 431

Query: 1352 FSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDN 1531
            FSCNMVGILNGQPKLMGL+ELL+AFLDFRCSVVERRA++KLSQAQ+R HIVEG+I+GLDN
Sbjct: 432  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVEGIIIGLDN 491

Query: 1532 LDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTE 1711
            LD VI+ ++ AS++A A A+L +E+ L++KQAEAILDISLR+LT+LERNKF++EGKSL  
Sbjct: 492  LDEVIKTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRA 551

Query: 1712 QISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILA 1891
            QIS+LEELLSSKKQILQ+IE+EA+E+K K+ TPR+S LED+D G LEDIDVIPNE+M+LA
Sbjct: 552  QISKLEELLSSKKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLA 611

Query: 1892 VSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSA 2071
            +SEKGYVKRMKPD FNLQNRGTIGKSVGKLRVND MSDF+VC AHD +LYFSDKGTVYS 
Sbjct: 612  ISEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSY 671

Query: 2072 RAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNL 2251
             A+KIPEC+RTAAGTPL+QILSLSDGERITSIIPVS+F   QYL+MLT NGYIKKV LN 
Sbjct: 672  PAYKIPECSRTAAGTPLIQILSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLNY 731

Query: 2252 FSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGV 2431
            F+SIR TGIIAIQLVPGDELKWV+CC+++D VAMAS NGM +L+ C +IR+ GRNTRG V
Sbjct: 732  FASIRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSV 791

Query: 2432 AMRLKEGDNMASIDVIPAAMRKNLELGSEAHSSR---LSGPWLLFVSESGYGKRVPLSRF 2602
            AMRLK+GD +AS+D+IP A++K L++    H      ++GPWLLFVSESGYGKRVP+SRF
Sbjct: 792  AMRLKDGDKVASMDIIPDALQKELDMTLAVHQRNRRSMNGPWLLFVSESGYGKRVPVSRF 851

Query: 2603 RISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISI 2782
            R S  NRVGLIGYKF++ED+L AVFVVG+S  +DGESDEQ+VLVSQSGTVNRIKV+DISI
Sbjct: 852  RTSPLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVQDISI 911

Query: 2783 QSRYARGVILMRLDHAGKIQSASLMSASEPDTE 2881
            QSRYARGVILMRL+HAGKIQSASL+SA++ D++
Sbjct: 912  QSRYARGVILMRLEHAGKIQSASLISAADADSD 944


>ref|XP_004230064.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Solanum lycopersicum]
          Length = 953

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 686/942 (72%), Positives = 793/942 (84%), Gaps = 16/942 (1%)
 Frame = +2

Query: 128  SMAFSTGFRLCRSYYSRISYPVLRPDIRFS-------DIRFLSXXXXXXXXXXXXXXXXK 286
            SMAFSTG RL R Y+ + ++  +    RFS       ++RFLS                K
Sbjct: 17   SMAFSTGIRLLRCYHHQFTFTAIPS--RFSGLRKASSELRFLSSVTPSRKHVRPVSARRK 74

Query: 287  AGGNIEAEPQDGDGNGSVTIKDKAS--GNDGERIVPTELHKEATEAYMAYAMSVLLGRAL 460
                +  E    +GNGSV ++D+    G  GERIV TELHKEATEAYM+YAMSVLLGRAL
Sbjct: 75   ----VTEEEVGEEGNGSVVLRDRDGNEGGGGERIVHTELHKEATEAYMSYAMSVLLGRAL 130

Query: 461  PDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ 640
            PDVRDGLKPVHRRIL+AMHELGLSS+KP+KK ARVVGEVLGKFHPHGD AVYDSLVRMAQ
Sbjct: 131  PDVRDGLKPVHRRILYAMHELGLSSKKPYKKSARVVGEVLGKFHPHGDNAVYDSLVRMAQ 190

Query: 641  DFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQ 820
            DFSLR PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFDNSQ
Sbjct: 191  DFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFDNSQ 250

Query: 821  KEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMP 1000
            KEPS            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMP
Sbjct: 251  KEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMP 310

Query: 1001 GPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKAS 1180
            GPDFPTGG+IMGN+GIL+AYR+GRGR+V+RGKTDIE++D++TKRAAIII+EIPYQTNKAS
Sbjct: 311  GPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTNKAS 370

Query: 1181 LVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSC 1360
            LVEKIA+LVE K+LEG+SDIRDESDRSGMR+VIELKRGS+P+IVLNNLYR T LQ+SFSC
Sbjct: 371  LVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTPLQSSFSC 430

Query: 1361 NMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDG 1540
            NMVGILNGQPKLMGL+ELL+AFLDFRCSVVERRA++KLSQAQ+R HIVEG+I+GLDNLD 
Sbjct: 431  NMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERNHIVEGIIIGLDNLDE 490

Query: 1541 VIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQIS 1720
            VI  ++ AS++A A A+L +E+ L++KQAEAILDISLR+LT+LERNKF++EGKSL  QIS
Sbjct: 491  VINTIRKASSHALATANLRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRTQIS 550

Query: 1721 RLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSE 1900
            +LEELLSS+KQILQ+IE+EA+E+K K+ TPR+S LED+D G LEDIDVIPNE+M+LA+SE
Sbjct: 551  KLEELLSSEKQILQLIEEEALEIKDKYFTPRRSQLEDTDSGDLEDIDVIPNEEMLLAISE 610

Query: 1901 KGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAF 2080
            KGYVKRMKPD FNLQNRGTIGKSVGKLRVND MSDF+VC AHD +LYFSDKGTVYS+ A+
Sbjct: 611  KGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAY 670

Query: 2081 KIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSS 2260
            KIPEC+RTAAGTPL+QILSLSDGERITSIIPVSDF   QYL+MLT NGYIKKV LN F+S
Sbjct: 671  KIPECSRTAAGTPLIQILSLSDGERITSIIPVSDFAGDQYLVMLTVNGYIKKVSLNYFAS 730

Query: 2261 IRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMR 2440
            IR TGIIAIQLVPGDELKWV+CC+++D VAMAS NGM +L+ C +IR+ GRNTRG VAMR
Sbjct: 731  IRSTGIIAIQLVPGDELKWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMR 790

Query: 2441 LKEGDNMASIDVIPAAMRKNLELGSEAHSSR---LSGPWLLFVSESGYGKRVPLSRFRIS 2611
            LK+GD +AS+D+IP A++K L++    H      ++GPWLLFVSESGYGKRVP+SRFR S
Sbjct: 791  LKDGDKVASMDIIPDALQKELDVTLAVHQRNKRSMNGPWLLFVSESGYGKRVPVSRFRTS 850

Query: 2612 TRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSR 2791
              NRVGLIGYKF++ED+L AVFVVG+S  +DGESDEQ+VLVSQSGTVNRIKVRDISIQSR
Sbjct: 851  PLNRVGLIGYKFSSEDRLAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVRDISIQSR 910

Query: 2792 YARGVILMRLDHAGKIQSASLMSA----SEPDTELMEGANMD 2905
            YARGVILMRL+HAGKIQSASL+SA    S+ D E+ +GA ++
Sbjct: 911  YARGVILMRLEHAGKIQSASLISAADADSDSDPEVEDGAAVE 952


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 691/928 (74%), Positives = 782/928 (84%), Gaps = 6/928 (0%)
 Frame = +2

Query: 116  THPKSMAFSTGFRLCRSYYSRISYPVLRPDIRFSDIRFLSXXXXXXXXXXXXXXXXKAGG 295
            T  K MAFSTG    R       +  LR     S++RFLS                +   
Sbjct: 13   TQSKPMAFSTGITPSR-------FSGLRKTS--SELRFLSSVTPPPRKQLRPVSARR--- 60

Query: 296  NIEAEPQDGDGNGSVTIKDKASGND---GERIVPTELHKEATEAYMAYAMSVLLGRALPD 466
              + E    +GNGSV ++D+    D   GER+V TELHKEATEAYM+YAMSVLLGRALPD
Sbjct: 61   --KEEEVGDEGNGSVILRDRGENEDRNGGERVVLTELHKEATEAYMSYAMSVLLGRALPD 118

Query: 467  VRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF 646
            VRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF
Sbjct: 119  VRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF 178

Query: 647  SLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKE 826
            SLR PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFDNSQKE
Sbjct: 179  SLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKE 238

Query: 827  PSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGP 1006
            PS            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGP
Sbjct: 239  PSLLPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGP 298

Query: 1007 DFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLV 1186
            DFPTGG+IMGN+GIL+A+R+GRGR+V+RGKTDIE++DS+TKRAAIII+EIPYQTNKASLV
Sbjct: 299  DFPTGGIIMGNIGILEAFRTGRGRVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKASLV 358

Query: 1187 EKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNM 1366
            EKIA+LVE K LEG+SDIRDESDRSGMRIVIELKRGS+P+IVLNNLYR TALQ+SFSCNM
Sbjct: 359  EKIADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFSCNM 418

Query: 1367 VGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVI 1546
            VGILNGQPKLMGL+ELL+AFLDFRCSVVERRA+FKLSQAQ+R HIVEG+IVGLDNLD VI
Sbjct: 419  VGILNGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERNHIVEGIIVGLDNLDEVI 478

Query: 1547 QVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRL 1726
              ++ AS+NA AAA L +E+ LS+KQAEAILDISLR+LT+LERNKF+EEGKSL  QIS+L
Sbjct: 479  NTIRKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLRTQISKL 538

Query: 1727 EELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKG 1906
            EELLSSKKQILQ+IE+EA+E+K+KF  PR+SMLED+D G LEDIDVIPNE+M+LA+SEKG
Sbjct: 539  EELLSSKKQILQLIEEEAIEIKNKFFNPRRSMLEDTDSGDLEDIDVIPNEEMLLAISEKG 598

Query: 1907 YVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKI 2086
            YVKRMKPD FNLQNRGTIGKSVGKLRVND MSDF+VC AHD +LYFSDKGTVYS+ A+KI
Sbjct: 599  YVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYKI 658

Query: 2087 PECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIR 2266
            PEC+RTAAGTPLVQILSLSDGERITSIIPVS+F   QYL+MLT NGYIKKV LN F+SIR
Sbjct: 659  PECSRTAAGTPLVQILSLSDGERITSIIPVSEFAADQYLVMLTVNGYIKKVSLNYFASIR 718

Query: 2267 ITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLK 2446
             TGIIAIQLVP DELKWV+CC+++D VAMASQNGM +L+ C +IR+ GRNTRG VAMRLK
Sbjct: 719  CTGIIAIQLVPDDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGSVAMRLK 778

Query: 2447 EGDNMASIDVIPAAMRKNLELGSEAHSSR---LSGPWLLFVSESGYGKRVPLSRFRISTR 2617
            EGD +AS+D+IP A++K L+   E    +   + GPWLLFVSESGYGKRVP+SRFR S  
Sbjct: 779  EGDKVASMDIIPDALQKELDKTLEVQQRQYRSMKGPWLLFVSESGYGKRVPVSRFRTSPL 838

Query: 2618 NRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYA 2797
            NRVGL GYKF++ED L AVFVVG+S+ +DGESDEQ+VLVSQSGTVNRIKVRDISIQSRYA
Sbjct: 839  NRVGLFGYKFSSEDCLAAVFVVGFSLGEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYA 898

Query: 2798 RGVILMRLDHAGKIQSASLMSASEPDTE 2881
            RGVILMRL+HAGKIQSASL+SA++ D E
Sbjct: 899  RGVILMRLEHAGKIQSASLISAADADPE 926


>ref|XP_006347707.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Solanum tuberosum]
          Length = 996

 Score = 1320 bits (3416), Expect = 0.0
 Identities = 682/972 (70%), Positives = 789/972 (81%), Gaps = 55/972 (5%)
 Frame = +2

Query: 131  MAFSTGFRLCRSYYSRISYPVLRPDIRFS-------DIRFLSXXXXXXXXXXXXXXXXKA 289
            MAFSTG RL R Y+   ++  +    RFS       ++RFLS                K 
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAIPS--RFSGLRRASSELRFLSSVTPPRKQVRPVSARRK- 74

Query: 290  GGNIEAEPQDGDGNGSVTIKDK------ASGNDGERIVPTELHKEATEAYMAYAMSVLLG 451
               +  E    +GNGSV ++D+        G  GERIV TELHKEATEAYM+YAMSVLLG
Sbjct: 75   ---VTEEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLG 131

Query: 452  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 631
            RALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYDSLVR
Sbjct: 132  RALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVR 191

Query: 632  MAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFD 811
            MAQDFSLR PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFD
Sbjct: 192  MAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFD 251

Query: 812  NSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 991
            NSQKEPS            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE
Sbjct: 252  NSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLE 311

Query: 992  YMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTN 1171
            YMPGPDFPTGG+IMGN+GIL+AYR+GRGR+V+RGKTDIE++D++TKRAAIII+EIPYQTN
Sbjct: 312  YMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTN 371

Query: 1172 KASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTS 1351
            KASLVEKIA+LVE K+LEG+SDIRDESDRSGMR+VIELKRGS+P+IVLNNLYR TALQ+S
Sbjct: 372  KASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSS 431

Query: 1352 FSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVE-------- 1507
            FSCNMVGILNGQPKLMGL+ELL+AFLDFRCSVVERRA++KLSQAQ+R HIVE        
Sbjct: 432  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPT 491

Query: 1508 --------------------------------GVIVGLDNLDGVIQVVKSASNNATAAAD 1591
                                            G+I+GLDNLD VI+ ++ AS++A A A+
Sbjct: 492  RRQAYASYQEKSSFPFCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATAN 551

Query: 1592 LMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQILQVIE 1771
            L +E+ L++KQAEAILDISLR+LT+LERNKF++EGKSL  QIS+LEELLSSKKQILQ+IE
Sbjct: 552  LRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIE 611

Query: 1772 QEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDVFNLQNR 1951
            +EA+E+K K+ TPR+S LED+D G LEDIDVIPNE+M+LA+SEKGYVKRMKPD FNLQNR
Sbjct: 612  EEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNR 671

Query: 1952 GTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAAGTPLVQI 2131
            GTIGKSVGKLRVND MSDF+VC AHD +LYFSDKGTVYS  A+KIPEC+RTAAGTPL+QI
Sbjct: 672  GTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSYPAYKIPECSRTAAGTPLIQI 731

Query: 2132 LSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQLVPGDEL 2311
            LSLSDGERITSIIPVS+F   QYL+MLT NGYIKKV LN F+SIR TGIIAIQLVPGDEL
Sbjct: 732  LSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLVPGDEL 791

Query: 2312 KWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASIDVIPAAM 2491
            KWV+CC+++D VAMAS NGM +L+ C +IR+ GRNTRG VAMRLK+GD +AS+D+IP A+
Sbjct: 792  KWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDIIPDAL 851

Query: 2492 RKNLELGSEAHSSR--LSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGYKFAAEDQL 2665
            +K L++    H  +  ++GPWLLFVSESGYGKRVP+SRFR S  NRVGLIGYKF++ED+L
Sbjct: 852  QKELDMTLAVHQRKRSMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYKFSSEDRL 911

Query: 2666 VAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDHAGKIQS 2845
             AVFVVG+S  +DGESDEQ+VLVSQSGTVNRIKV+DISIQSRYARGVILMRL+HAGKIQS
Sbjct: 912  AAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVQDISIQSRYARGVILMRLEHAGKIQS 971

Query: 2846 ASLMSASEPDTE 2881
            ASL+SA++ D++
Sbjct: 972  ASLISAADADSD 983


>ref|XP_006347706.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Solanum tuberosum]
          Length = 997

 Score = 1319 bits (3413), Expect = 0.0
 Identities = 682/973 (70%), Positives = 788/973 (80%), Gaps = 56/973 (5%)
 Frame = +2

Query: 131  MAFSTGFRLCRSYYSRISYPVLRPDIRFS-------DIRFLSXXXXXXXXXXXXXXXXKA 289
            MAFSTG RL R Y+   ++  +    RFS       ++RFLS                K 
Sbjct: 18   MAFSTGIRLLRCYHHHFTFTAIPS--RFSGLRRASSELRFLSSVTPPRKQVRPVSARRK- 74

Query: 290  GGNIEAEPQDGDGNGSVTIKDK------ASGNDGERIVPTELHKEATEAYMAYAMSVLLG 451
               +  E    +GNGSV ++D+        G  GERIV TELHKEATEAYM+YAMSVLLG
Sbjct: 75   ---VTEEEVGDEGNGSVILRDRDGNEGGGGGGGGERIVLTELHKEATEAYMSYAMSVLLG 131

Query: 452  RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 631
            RALPDVRDGLKPVHRRIL+AMHELGLSS+KP+KKCARVVGEVLGKFHPHGD AVYDSLVR
Sbjct: 132  RALPDVRDGLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDNAVYDSLVR 191

Query: 632  MAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFD 811
            MAQDFSLR PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFD
Sbjct: 192  MAQDFSLRSPLIRGHGNFGSIDADPPAAMRYTECRLEALTEAMLLADLEQNTVDFVPNFD 251

Query: 812  NSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLE 991
            NSQKEPS            G+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLE
Sbjct: 252  NSQKEPSLLPARIPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLE 311

Query: 992  YMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTN 1171
            YMPGPDFPTGG+IMGN+GIL+AYR+GRGR+V+RGKTDIE++D++TKRAAIII+EIPYQTN
Sbjct: 312  YMPGPDFPTGGIIMGNIGILEAYRTGRGRVVIRGKTDIELLDAKTKRAAIIIQEIPYQTN 371

Query: 1172 KASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTS 1351
            KASLVEKIA+LVE K+LEG+SDIRDESDRSGMR+VIELKRGS+P+IVLNNLYR TALQ+S
Sbjct: 372  KASLVEKIADLVENKTLEGVSDIRDESDRSGMRVVIELKRGSDPAIVLNNLYRLTALQSS 431

Query: 1352 FSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVE-------- 1507
            FSCNMVGILNGQPKLMGL+ELL+AFLDFRCSVVERRA++KLSQAQ+R HIVE        
Sbjct: 432  FSCNMVGILNGQPKLMGLKELLQAFLDFRCSVVERRAKYKLSQAQERSHIVERPKQVLPT 491

Query: 1508 --------------------------------GVIVGLDNLDGVIQVVKSASNNATAAAD 1591
                                            G+I+GLDNLD VI+ ++ AS++A A A+
Sbjct: 492  RRQAYASYQEKSSFPFCNFLLGIIPSSSNHLMGIIIGLDNLDEVIKTIRKASSHALATAN 551

Query: 1592 LMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQILQVIE 1771
            L +E+ L++KQAEAILDISLR+LT+LERNKF++EGKSL  QIS+LEELLSSKKQILQ+IE
Sbjct: 552  LRKEFELTEKQAEAILDISLRRLTALERNKFVDEGKSLRAQISKLEELLSSKKQILQLIE 611

Query: 1772 QEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDVFNLQNR 1951
            +EA+E+K K+ TPR+S LED+D G LEDIDVIPNE+M+LA+SEKGYVKRMKPD FNLQNR
Sbjct: 612  EEALEIKDKYFTPRRSQLEDTDSGNLEDIDVIPNEEMLLAISEKGYVKRMKPDTFNLQNR 671

Query: 1952 GTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAAGTPLVQI 2131
            GTIGKSVGKLRVND MSDF+VC AHD +LYFSDKGTVYS  A+KIPEC+RTAAGTPL+QI
Sbjct: 672  GTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSYPAYKIPECSRTAAGTPLIQI 731

Query: 2132 LSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQLVPGDEL 2311
            LSLSDGERITSIIPVS+F   QYL+MLT NGYIKKV LN F+SIR TGIIAIQLVPGDEL
Sbjct: 732  LSLSDGERITSIIPVSEFVGDQYLVMLTVNGYIKKVSLNYFASIRSTGIIAIQLVPGDEL 791

Query: 2312 KWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASIDVIPAAM 2491
            KWV+CC+++D VAMAS NGM +L+ C +IR+ GRNTRG VAMRLK+GD +AS+D+IP A+
Sbjct: 792  KWVKCCSNNDFVAMASLNGMVILTPCANIRALGRNTRGSVAMRLKDGDKVASMDIIPDAL 851

Query: 2492 RKNLELGSEAHSSR---LSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGYKFAAEDQ 2662
            +K L++    H      ++GPWLLFVSESGYGKRVP+SRFR S  NRVGLIGYKF++ED+
Sbjct: 852  QKELDMTLAVHQRNRRSMNGPWLLFVSESGYGKRVPVSRFRTSPLNRVGLIGYKFSSEDR 911

Query: 2663 LVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDHAGKIQ 2842
            L AVFVVG+S  +DGESDEQ+VLVSQSGTVNRIKV+DISIQSRYARGVILMRL+HAGKIQ
Sbjct: 912  LAAVFVVGFSFGEDGESDEQVVLVSQSGTVNRIKVQDISIQSRYARGVILMRLEHAGKIQ 971

Query: 2843 SASLMSASEPDTE 2881
            SASL+SA++ D++
Sbjct: 972  SASLISAADADSD 984


>ref|XP_006587249.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 935

 Score = 1316 bits (3407), Expect = 0.0
 Identities = 667/860 (77%), Positives = 756/860 (87%), Gaps = 7/860 (0%)
 Frame = +2

Query: 323  DGNGSVTIKDKASGNDGE----RIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPV 490
            D NGSVT    A+ ++G     R+VPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPV
Sbjct: 68   DENGSVTTAASATTDNGYVSEGRVVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPV 127

Query: 491  HRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIN 670
            HRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR PLI 
Sbjct: 128  HRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIQ 187

Query: 671  GHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSXXXXXX 850
            GHGNFGSIDADPPAAMRYTECR               +TVDFVPNFDNSQKEPS      
Sbjct: 188  GHGNFGSIDADPPAAMRYTECRLDDLTEAMLLTDLEQDTVDFVPNFDNSQKEPSLLPARL 247

Query: 851  XXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGVI 1030
                  GSSGIAVGMATNIPPHNLGE+VD L VLIHNPEATLQELLEYMPGPDFPTGG+I
Sbjct: 248  PTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATLQELLEYMPGPDFPTGGLI 307

Query: 1031 MGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKIAELVE 1210
            MGN+GIL+AYR+GRGR+++RGKTDIE++DS+TKR AIIIKEIPYQTNKA+LVEKIAELVE
Sbjct: 308  MGNLGILEAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEIPYQTNKATLVEKIAELVE 367

Query: 1211 AKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGILNGQP 1390
             KSL+GISDIRDESDRSGMRIVIELKRGS+P IVLNNLYR T+LQ++FSCNMVGILNGQP
Sbjct: 368  NKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTSLQSTFSCNMVGILNGQP 427

Query: 1391 KLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVVKSASN 1570
            K MGL+ELL+AFLDFRCSVVERRA+FKLSQAQ+RRHIVEG+++G DNLDGVI++++ AS+
Sbjct: 428  KQMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGILIGFDNLDGVIRIIREASS 487

Query: 1571 NATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKK 1750
            N+ AAA L   ++LS+KQAEA+LDISLR+L+  E   F+ E KSL EQIS+LEELLSS+K
Sbjct: 488  NSAAAAGLRNAFSLSEKQAEALLDISLRRLSLRESGNFVAESKSLMEQISKLEELLSSRK 547

Query: 1751 QILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPD 1930
             IL++IEQEA+ELKSKFS PR+SMLED+D G LEDIDVIPNE+MILA+SEKGY+KRMKP 
Sbjct: 548  NILELIEQEAIELKSKFSNPRRSMLEDTDNGQLEDIDVIPNEEMILALSEKGYMKRMKPS 607

Query: 1931 VFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAA 2110
             FNLQNRGTIGKSVGKL+VND+MSDF+VCHAHDH+LYFSDKGTVYSARA+KIPEC+RTAA
Sbjct: 608  TFNLQNRGTIGKSVGKLKVNDSMSDFLVCHAHDHVLYFSDKGTVYSARAYKIPECSRTAA 667

Query: 2111 GTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQ 2290
            GTPLVQILSLSDGERITSIIPVS+F + Q+L+MLT  GYIK+V LNLFSSIR  GIIAIQ
Sbjct: 668  GTPLVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQGYIKRVSLNLFSSIRSIGIIAIQ 727

Query: 2291 LVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASI 2470
            LVPGDELKWVR C++DD VAMAS NGM +LS C  IR+  RNTRG  AMRLK+GD MAS+
Sbjct: 728  LVPGDELKWVRLCSNDDFVAMASHNGMVMLSQCSKIRTLSRNTRGAPAMRLKKGDKMASV 787

Query: 2471 DVIPAAMRKNLELGSE---AHSSRLSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGY 2641
            D+IPAAM  NLE  S+    ++   +GPWLLFVSE+GYGKRVPLS FRIS+ NRVGLIGY
Sbjct: 788  DIIPAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGYGKRVPLSSFRISSLNRVGLIGY 847

Query: 2642 KFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRL 2821
            KF+AED+L AVFVVG+S ++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR+ARGVILMRL
Sbjct: 848  KFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVILMRL 907

Query: 2822 DHAGKIQSASLMSASEPDTE 2881
            DH+GKIQSASL+SA++ + E
Sbjct: 908  DHSGKIQSASLISATDCEPE 927


>ref|XP_004499748.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X1 [Cicer arietinum]
          Length = 942

 Score = 1316 bits (3407), Expect = 0.0
 Identities = 678/941 (72%), Positives = 790/941 (83%), Gaps = 20/941 (2%)
 Frame = +2

Query: 119  HPKSMAFSTGFRLCR-----------SYYSRISYPVLRPDIRFSDIRFLSXXXXXXXXXX 265
            H  +M+FS+ FRL             S++ R S          S++RFLS          
Sbjct: 10   HNSTMSFSSAFRLLTLSPFTPTITRFSFFRRTS----------SELRFLSASTRRRPSIS 59

Query: 266  XXXXXXKAGGNIEAEP-QDGDGNGSVTIKDKASG-----NDGERIVPTELHKEATEAYMA 427
                  KA      EP QDG+GNGS+ + D   G     N+G RIV TELHKEATEAYM+
Sbjct: 60   V-----KASSGRRDEPEQDGNGNGSLAVIDGNGGGGDKRNEG-RIVLTELHKEATEAYMS 113

Query: 428  YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDT 607
            YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+
Sbjct: 114  YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDS 173

Query: 608  AVYDSLVRMAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNT 787
            AVYDS+VRMAQDFSLR PL+NGHGNFGSIDADPPAAMRYTECR               +T
Sbjct: 174  AVYDSMVRMAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDT 233

Query: 788  VDFVPNFDNSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPE 967
            VDF PNFDNSQKEPS            GSSGIAVGMATNIPPHNLGE+VD L V+IHNPE
Sbjct: 234  VDFAPNFDNSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPE 293

Query: 968  ATLQELLEYMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIII 1147
            ATLQELLEYMPGPDFPTGG+IMGN+GIL+AYR+GRGR+++RGKTDIE++DS+TKR AIII
Sbjct: 294  ATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAIII 353

Query: 1148 KEIPYQTNKASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLY 1327
            KEIPYQTNKA+LVEKIAELVE KSLEGISDIRDESDRSGMRIVIELKRGS+P IVLNNLY
Sbjct: 354  KEIPYQTNKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLY 413

Query: 1328 RHTALQTSFSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVE 1507
            R T+LQ++FSCNMVGILNGQPK MGL+ELL+AFLDFRCSVVERRA+F+LS+AQ RRH+VE
Sbjct: 414  RLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHVVE 473

Query: 1508 GVIVGLDNLDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFI 1687
            G++VG +NLD VI++++ AS+N  AAA L  E+NLS+KQAEA+LD+SLR+LT  E + F+
Sbjct: 474  GILVGFNNLDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDNFV 533

Query: 1688 EEGKSLTEQISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVI 1867
             E KSL EQIS+LEELLSS+K IL++IEQEA++LK+KF++PR+S+LED+D G L+DIDVI
Sbjct: 534  AENKSLVEQISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDIDVI 593

Query: 1868 PNEDMILAVSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFS 2047
            PNE+M+LA+SEKGY+KRMKP  FNLQNRGTIGKSVGKL++ND+MSDFIVC AHD++LYFS
Sbjct: 594  PNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLYFS 653

Query: 2048 DKGTVYSARAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGY 2227
            DKGTVYSARA+KIPEC+RTAAGTPLVQILSLSDGERITSIIPVS+F + Q+L+MLT  GY
Sbjct: 654  DKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFTEDQFLLMLTMQGY 713

Query: 2228 IKKVPLNLFSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQ 2407
            IK+VPLN FSSIR TGIIAIQLVPGD+LKWVRCCT+DD VAMAS NGM +LS C  IR+ 
Sbjct: 714  IKRVPLNSFSSIRSTGIIAIQLVPGDKLKWVRCCTNDDFVAMASHNGMVILSLCSKIRTL 773

Query: 2408 GRNTRGGVAMRLKEGDNMASIDVIPAAMRKNLELGSEAHSSRL---SGPWLLFVSESGYG 2578
            GRNTRGG+AMRL+EGD MAS+D+IPA+M  +LE  S+   + +   +GPWLLFVSESGYG
Sbjct: 774  GRNTRGGLAMRLREGDRMASVDIIPASMWNDLETISKLPGNNVKSHNGPWLLFVSESGYG 833

Query: 2579 KRVPLSRFRISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNR 2758
            KRVPLS FR+S+ NRVGLIGYKF+AED+L +VFVVG+S+++DGESDEQ+VLVSQSGTVNR
Sbjct: 834  KRVPLSFFRMSSLNRVGLIGYKFSAEDRLASVFVVGFSLAEDGESDEQVVLVSQSGTVNR 893

Query: 2759 IKVRDISIQSRYARGVILMRLDHAGKIQSASLMSASEPDTE 2881
            IKVRDISIQSR+ARGVILMRLDHAGKIQSASL+SA+E + E
Sbjct: 894  IKVRDISIQSRFARGVILMRLDHAGKIQSASLISATECEPE 934


>ref|XP_002315402.2| DNA gyrase subunit A family protein [Populus trichocarpa]
            gi|550330577|gb|EEF01573.2| DNA gyrase subunit A family
            protein [Populus trichocarpa]
          Length = 948

 Score = 1316 bits (3405), Expect = 0.0
 Identities = 670/876 (76%), Positives = 762/876 (86%), Gaps = 5/876 (0%)
 Frame = +2

Query: 302  EAEPQDGDGNGSVTIKDKASGNDGE---RIVPTELHKEATEAYMAYAMSVLLGRALPDVR 472
            E    D   NGS+ +KD   G+ G    R+V TELHKEATEAYMAYAMSVLLGRALPDVR
Sbjct: 70   EEPATDDSENGSLLVKDPNGGSPGGGNGRVVQTELHKEATEAYMAYAMSVLLGRALPDVR 129

Query: 473  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 652
            DGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFSL
Sbjct: 130  DGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVYDALVRMAQDFSL 189

Query: 653  RCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPS 832
            RCPLI GHGNFGS+DADPPAAMRYTECR               +TVDFVPNFDNSQKEPS
Sbjct: 190  RCPLIQGHGNFGSVDADPPAAMRYTECRLDGLTEAVFLADLEQDTVDFVPNFDNSQKEPS 249

Query: 833  XXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDF 1012
                        GSSGIAVGMAT IPPHNLGELVD L  LIHNPEATLQELLEYMPGPDF
Sbjct: 250  LFPTRLPTLLLNGSSGIAVGMATKIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDF 309

Query: 1013 PTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEK 1192
            PTGG+IMGN GILDAYRSG+GRIV+RGKTD+E++DS+TKR A+IIKEIPYQTNKASLVEK
Sbjct: 310  PTGGIIMGNQGILDAYRSGQGRIVVRGKTDVELLDSKTKRNAVIIKEIPYQTNKASLVEK 369

Query: 1193 IAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVG 1372
            IAELVE K+L+GISDIRDESDRSGMRIVIELKRG++PSIVLNNLYR T LQ+SFSCNMVG
Sbjct: 370  IAELVEDKNLDGISDIRDESDRSGMRIVIELKRGADPSIVLNNLYRLTPLQSSFSCNMVG 429

Query: 1373 ILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQV 1552
            IL+GQPK MGL+ELL+AFLDFRCSVVERRA FKLS+AQ RRHIVEGV+ GLDNLD V+ +
Sbjct: 430  ILDGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSEAQKRRHIVEGVMAGLDNLDRVVDI 489

Query: 1553 VKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEE 1732
            ++ AS+NA A+ADL  E++LS+KQAEAILDISLR+LT LE  KF+EE KSL EQI++LEE
Sbjct: 490  IRKASSNAIASADLRNEFSLSEKQAEAILDISLRRLTLLEGKKFVEESKSLMEQITKLEE 549

Query: 1733 LLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYV 1912
            LLSS+  ILQ+IEQEA+ELK+KFS PR+SMLEDSD G LEDIDVIPNE+M+LA+SEKGYV
Sbjct: 550  LLSSRGNILQLIEQEAVELKNKFSNPRRSMLEDSDSGQLEDIDVIPNEEMLLAISEKGYV 609

Query: 1913 KRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPE 2092
            KRMKP+ FNLQNRGTIGKSVGKLR +D MSDFIVCHAHD +LYFSD+G VYSA A+KIPE
Sbjct: 610  KRMKPNTFNLQNRGTIGKSVGKLRDSDAMSDFIVCHAHDRVLYFSDQGIVYSAPAYKIPE 669

Query: 2093 CTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRIT 2272
            CTR AAGTPL+Q LSLSDGERITSIIPVS+F + Q+L+MLT NGYIKKV LN FS+IR T
Sbjct: 670  CTRAAAGTPLIQFLSLSDGERITSIIPVSEFVEDQFLLMLTVNGYIKKVSLNSFSAIRST 729

Query: 2273 GIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEG 2452
            GIIAIQLVPGDELKWVRCCT+ DLVAMASQNGM +L+SC +IR+ GRNTRGGVAMRL+EG
Sbjct: 730  GIIAIQLVPGDELKWVRCCTNGDLVAMASQNGMVILTSCENIRALGRNTRGGVAMRLREG 789

Query: 2453 DNMASIDVIPAAMRKNLELGSE--AHSSRLSGPWLLFVSESGYGKRVPLSRFRISTRNRV 2626
            D +AS+D+IPA+++K+LE+ S+   ++++ +GPWLLFVSESG+GKRVPLS F+ S  NRV
Sbjct: 790  DKIASMDIIPASLQKDLEVASKDSENNNKGTGPWLLFVSESGHGKRVPLSSFKQSRLNRV 849

Query: 2627 GLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGV 2806
            GLIGYKF  ED L AVF VG+S+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR+ARGV
Sbjct: 850  GLIGYKFFEEDHLAAVFAVGFSLTEDGESDEQVVLVSQSGTVNRIKVRDISIQSRFARGV 909

Query: 2807 ILMRLDHAGKIQSASLMSASEPDTELMEGANMDELV 2914
            ILMRL+HAGKIQS SL+SA++P  EL E A + EL+
Sbjct: 910  ILMRLEHAGKIQSTSLISAADP--ELEELAPVPELL 943


>gb|EOY19461.1| DNA gyrase subunit A [Theobroma cacao]
          Length = 1368

 Score = 1316 bits (3405), Expect = 0.0
 Identities = 682/925 (73%), Positives = 777/925 (84%), Gaps = 7/925 (0%)
 Frame = +2

Query: 128  SMAFSTGFRLCRS--YYSRISYPVLRPDIRFSDIRFLSXXXXXXXXXXXXXXXXKAGGNI 301
            S++++  F   R   Y +      LRP++  S +RFLS                +AGG  
Sbjct: 2    SLSYTLRFSFLRHNLYLAPSGVSALRPNL--SHLRFLSVTPTRPLLSPVKAR--RAGGQ- 56

Query: 302  EAEPQDGDGNGSVT--IKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVRD 475
              E +DG GNGS+T  + D + G    R+VPTELHKEATE+YMAYA+SVLLGRALPDVRD
Sbjct: 57   --EDEDGAGNGSLTAIVNDGSGGGGDGRVVPTELHKEATESYMAYALSVLLGRALPDVRD 114

Query: 476  GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 655
            GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR
Sbjct: 115  GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 174

Query: 656  CPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSX 835
             PLI GHGNFGSIDADPPAAMRYTECR               +TVDFVPNFDNS KEPS 
Sbjct: 175  FPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAILLADLEQDTVDFVPNFDNSHKEPSL 234

Query: 836  XXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1015
                       G+SGIAVGMATNIPPHNLGELVD L  LI NPEA+LQELLEYMPGPDFP
Sbjct: 235  LPARLPTLLLNGTSGIAVGMATNIPPHNLGELVDVLCALIQNPEASLQELLEYMPGPDFP 294

Query: 1016 TGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKI 1195
            TGG+IMGN+GIL+AYR+GRGRIV+RGK DIE++DS+TKR+A+IIKEIPYQTNK+SLVEKI
Sbjct: 295  TGGLIMGNLGILEAYRTGRGRIVVRGKADIELLDSKTKRSAVIIKEIPYQTNKSSLVEKI 354

Query: 1196 AELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGI 1375
            AELVE KSLEGISDIRDESDRSGMR+VIELKRGS+PSIVLNNLYR TALQ+SFSCNMVGI
Sbjct: 355  AELVENKSLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTALQSSFSCNMVGI 414

Query: 1376 LNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVV 1555
            L+GQPK MGL+ELL++FLDFRCSVVERRA++KLSQAQDRRHIVEG++VGLDNLD VI ++
Sbjct: 415  LDGQPKQMGLKELLQSFLDFRCSVVERRARYKLSQAQDRRHIVEGIVVGLDNLDSVIDII 474

Query: 1556 KSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEEL 1735
            + AS+NA A+A L  E+NLS KQAEAILDI+LR+L  LER KF+ E +SL EQIS+L EL
Sbjct: 475  REASSNAAASAGLRNEFNLSDKQAEAILDINLRRLNLLERKKFVGESRSLMEQISKLTEL 534

Query: 1736 LSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVK 1915
            LSS+K ILQ+IEQEA+ELKSKFS+PR+S+LEDSD G LEDIDVIPNE+M+LA SEKGYVK
Sbjct: 535  LSSRKNILQLIEQEAIELKSKFSSPRRSILEDSDGGQLEDIDVIPNEEMLLAFSEKGYVK 594

Query: 1916 RMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPEC 2095
            RMKP+ FNLQNRGTIGKSVGKLR ND MSDFIVC AHDH+LYFSDKG VY+ARA+KIPE 
Sbjct: 595  RMKPNTFNLQNRGTIGKSVGKLRFNDAMSDFIVCRAHDHVLYFSDKGIVYTARAYKIPES 654

Query: 2096 TRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITG 2275
            +RTAAGTPLVQI+SLS+GERITSII VS+F + Q+L MLT NGYIKKV LN FS+IR TG
Sbjct: 655  SRTAAGTPLVQIISLSEGERITSIISVSEFAEDQFLAMLTVNGYIKKVSLNYFSAIRSTG 714

Query: 2276 IIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGD 2455
            IIAIQLVPGDELKWVRCC +DDLVAMASQNGM +LSSCG IR+  RNTRG +AMRLKEGD
Sbjct: 715  IIAIQLVPGDELKWVRCCINDDLVAMASQNGMVILSSCGIIRALSRNTRGAIAMRLKEGD 774

Query: 2456 NMASIDVIPAAMRKNLELGSE---AHSSRLSGPWLLFVSESGYGKRVPLSRFRISTRNRV 2626
             MAS+D+IPA   K+L+   E    ++   SGPWLLFVSE+GYGKRVPLS F+ S  NRV
Sbjct: 775  KMASMDIIPAPRHKDLDKAEEDSMNNNKGGSGPWLLFVSENGYGKRVPLSSFKRSPLNRV 834

Query: 2627 GLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGV 2806
            GLIGYKF++ED+L AVFVVG+S+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSRYARGV
Sbjct: 835  GLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGV 894

Query: 2807 ILMRLDHAGKIQSASLMSASEPDTE 2881
            ILMRL++AGKIQSASL+SAS  + E
Sbjct: 895  ILMRLEYAGKIQSASLISASAHEAE 919


>ref|XP_004308178.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 939

 Score = 1315 bits (3402), Expect = 0.0
 Identities = 690/934 (73%), Positives = 775/934 (82%), Gaps = 17/934 (1%)
 Frame = +2

Query: 131  MAFSTGFRLCRSYYSRISYPVLRPDIRFS-------DIRFLSXXXXXXXXXXXXXXXX-- 283
            MA ++G RL  S + R   P      RFS       D+RFLS                  
Sbjct: 1    MALASGLRLS-STFLRCRLPAPLNPTRFSALRHSLFDLRFLSASSSSRTRTRTRLRPRPI 59

Query: 284  -----KAGGNIEAEPQDGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLL 448
                 + GG +E   +  +GNGSV +KD       ERIV  ELHKEAT+AYMAYAMSVLL
Sbjct: 60   KATPSEDGGLLEGAGEGQNGNGSVLVKDS-----DERIVRVELHKEATDAYMAYAMSVLL 114

Query: 449  GRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLV 628
            GRALPD+RDGLKPVHRRIL+AMHEL LSSRKPF KCARVVGEVLGKFHPHGDTAVYDSLV
Sbjct: 115  GRALPDIRDGLKPVHRRILYAMHELRLSSRKPFVKCARVVGEVLGKFHPHGDTAVYDSLV 174

Query: 629  RMAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNF 808
            RMAQDFSLR PLINGHGNFGSIDADP AAMRYTECR               +TVDFVPNF
Sbjct: 175  RMAQDFSLRSPLINGHGNFGSIDADPAAAMRYTECRLEALTEAMLLSDLEQDTVDFVPNF 234

Query: 809  DNSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELL 988
            DNSQKEPS            GSSGIAVGMATNIPPHNLGELVD LSVLIHNPEATLQELL
Sbjct: 235  DNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDVLSVLIHNPEATLQELL 294

Query: 989  EYMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQT 1168
            EYMPGPDFPTGG+IMGN+GIL+AYR+GRGRIV+RGKTDIE +DS+ KR+AIIIKEIPYQT
Sbjct: 295  EYMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGKTDIESLDSKGKRSAIIIKEIPYQT 354

Query: 1169 NKASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQT 1348
            NKA+LVEKIA+LVE K L+GISDIRDESDR+GMR+VIELKRGS+PSIVLNNLYR T+LQ+
Sbjct: 355  NKAALVEKIAQLVENKILDGISDIRDESDRTGMRVVIELKRGSDPSIVLNNLYRLTSLQS 414

Query: 1349 SFSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLD 1528
            SFSCNMVGILNGQPKLMGL+ELL+AFLDFRCSV+ERRA+FKLSQAQDRRHIVEG+ VGLD
Sbjct: 415  SFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRRHIVEGIAVGLD 474

Query: 1529 NLDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLT 1708
            NL  V+++   ASNN  A++ L  E+NLS+KQAEAILD + R+L  LER KF  E +SL 
Sbjct: 475  NLQRVMRISLEASNNTIASSLLRNEFNLSEKQAEAILDFNFRRLNVLERKKFDNESESLK 534

Query: 1709 EQISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMIL 1888
            EQIS+LEELLSSKK+ILQV+EQEA+++K+KF+ PR+SMLEDSD G L+DIDVIPN++M+L
Sbjct: 535  EQISKLEELLSSKKRILQVVEQEAIDIKNKFANPRRSMLEDSDGGQLDDIDVIPNDEMLL 594

Query: 1889 AVSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYS 2068
            A SEKGYVKRMKP+ FNLQNRGTIGKSVGKLRVND MSDFIVCHAHDH+L+FSDKGTVYS
Sbjct: 595  AFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDHVLFFSDKGTVYS 654

Query: 2069 ARAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLN 2248
            ARA+KIPEC+RTAAGTPLVQILSLSDGERITS+IPVS+F   Q+L+MLT NGYIKKV L+
Sbjct: 655  ARAYKIPECSRTAAGTPLVQILSLSDGERITSVIPVSEFAGDQFLLMLTVNGYIKKVSLS 714

Query: 2249 LFSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGG 2428
             FSSIR TGIIAIQLVPGDELKWVRCCT+DDLVAMAS NGM +L S   IR+ GRNTRG 
Sbjct: 715  SFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASLNGMVILCSSDIIRALGRNTRGS 774

Query: 2429 VAMRLKEGDNMASIDVIPAAMRKNLELGSEAHSS---RLSGPWLLFVSESGYGKRVPLSR 2599
            VAMRLKEGD MAS+D+IPAAM K+L+  SEA  S    L GPWLLFVSESGYGKRVPLSR
Sbjct: 775  VAMRLKEGDKMASVDIIPAAMWKDLKRVSEAPESTARSLDGPWLLFVSESGYGKRVPLSR 834

Query: 2600 FRISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDIS 2779
            F  S  NRVGLIGYKF++ED+L AVFVVG+S+++DGESDEQ+VLVSQSGTVNRIKVRDIS
Sbjct: 835  FHSSRLNRVGLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDIS 894

Query: 2780 IQSRYARGVILMRLDHAGKIQSASLMSASEPDTE 2881
            IQSRYARGVILMRLD AGKIQSASLMSA++ + E
Sbjct: 895  IQSRYARGVILMRLDLAGKIQSASLMSATDEEPE 928


>ref|XP_004499749.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            isoform X2 [Cicer arietinum]
          Length = 944

 Score = 1311 bits (3394), Expect = 0.0
 Identities = 678/943 (71%), Positives = 790/943 (83%), Gaps = 22/943 (2%)
 Frame = +2

Query: 119  HPKSMAFSTGFRLCR-----------SYYSRISYPVLRPDIRFSDIRFLSXXXXXXXXXX 265
            H  +M+FS+ FRL             S++ R S          S++RFLS          
Sbjct: 10   HNSTMSFSSAFRLLTLSPFTPTITRFSFFRRTS----------SELRFLSASTRRRPSIS 59

Query: 266  XXXXXXKAGGNIEAEP-QDGDGNGSVTIKDKASG-----NDGERIVPTELHKEATEAYMA 427
                  KA      EP QDG+GNGS+ + D   G     N+G RIV TELHKEATEAYM+
Sbjct: 60   V-----KASSGRRDEPEQDGNGNGSLAVIDGNGGGGDKRNEG-RIVLTELHKEATEAYMS 113

Query: 428  YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDT 607
            YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGD+
Sbjct: 114  YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDS 173

Query: 608  AVYDSLVRMAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNT 787
            AVYDS+VRMAQDFSLR PL+NGHGNFGSIDADPPAAMRYTECR               +T
Sbjct: 174  AVYDSMVRMAQDFSLRSPLVNGHGNFGSIDADPPAAMRYTECRLEELAEAMLLADLDQDT 233

Query: 788  VDFVPNFDNSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPE 967
            VDF PNFDNSQKEPS            GSSGIAVGMATNIPPHNLGE+VD L V+IHNPE
Sbjct: 234  VDFAPNFDNSQKEPSVLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVMIHNPE 293

Query: 968  AT--LQELLEYMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAI 1141
            AT  LQELLEYMPGPDFPTGG+IMGN+GIL+AYR+GRGR+++RGKTDIE++DS+TKR AI
Sbjct: 294  ATVSLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIVRGKTDIELLDSKTKRTAI 353

Query: 1142 IIKEIPYQTNKASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNN 1321
            IIKEIPYQTNKA+LVEKIAELVE KSLEGISDIRDESDRSGMRIVIELKRGS+P IVLNN
Sbjct: 354  IIKEIPYQTNKAALVEKIAELVENKSLEGISDIRDESDRSGMRIVIELKRGSDPLIVLNN 413

Query: 1322 LYRHTALQTSFSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHI 1501
            LYR T+LQ++FSCNMVGILNGQPK MGL+ELL+AFLDFRCSVVERRA+F+LS+AQ RRH+
Sbjct: 414  LYRLTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFQLSKAQQRRHV 473

Query: 1502 VEGVIVGLDNLDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNK 1681
            VEG++VG +NLD VI++++ AS+N  AAA L  E+NLS+KQAEA+LD+SLR+LT  E + 
Sbjct: 474  VEGILVGFNNLDRVIRIIREASSNTIAAAGLRNEFNLSEKQAEALLDMSLRRLTLRESDN 533

Query: 1682 FIEEGKSLTEQISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDID 1861
            F+ E KSL EQIS+LEELLSS+K IL++IEQEA++LK+KF++PR+S+LED+D G L+DID
Sbjct: 534  FVAENKSLVEQISKLEELLSSRKNILELIEQEAIDLKNKFASPRRSILEDTDNGQLDDID 593

Query: 1862 VIPNEDMILAVSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILY 2041
            VIPNE+M+LA+SEKGY+KRMKP  FNLQNRGTIGKSVGKL++ND+MSDFIVC AHD++LY
Sbjct: 594  VIPNEEMLLALSEKGYLKRMKPSTFNLQNRGTIGKSVGKLKMNDSMSDFIVCRAHDYVLY 653

Query: 2042 FSDKGTVYSARAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTAN 2221
            FSDKGTVYSARA+KIPEC+RTAAGTPLVQILSLSDGERITSIIPVS+F + Q+L+MLT  
Sbjct: 654  FSDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFTEDQFLLMLTMQ 713

Query: 2222 GYIKKVPLNLFSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIR 2401
            GYIK+VPLN FSSIR TGIIAIQLVPGD+LKWVRCCT+DD VAMAS NGM +LS C  IR
Sbjct: 714  GYIKRVPLNSFSSIRSTGIIAIQLVPGDKLKWVRCCTNDDFVAMASHNGMVILSLCSKIR 773

Query: 2402 SQGRNTRGGVAMRLKEGDNMASIDVIPAAMRKNLELGSEAHSSRL---SGPWLLFVSESG 2572
            + GRNTRGG+AMRL+EGD MAS+D+IPA+M  +LE  S+   + +   +GPWLLFVSESG
Sbjct: 774  TLGRNTRGGLAMRLREGDRMASVDIIPASMWNDLETISKLPGNNVKSHNGPWLLFVSESG 833

Query: 2573 YGKRVPLSRFRISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTV 2752
            YGKRVPLS FR+S+ NRVGLIGYKF+AED+L +VFVVG+S+++DGESDEQ+VLVSQSGTV
Sbjct: 834  YGKRVPLSFFRMSSLNRVGLIGYKFSAEDRLASVFVVGFSLAEDGESDEQVVLVSQSGTV 893

Query: 2753 NRIKVRDISIQSRYARGVILMRLDHAGKIQSASLMSASEPDTE 2881
            NRIKVRDISIQSR+ARGVILMRLDHAGKIQSASL+SA+E + E
Sbjct: 894  NRIKVRDISIQSRFARGVILMRLDHAGKIQSASLISATECEPE 936


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score = 1307 bits (3383), Expect = 0.0
 Identities = 672/923 (72%), Positives = 775/923 (83%), Gaps = 6/923 (0%)
 Frame = +2

Query: 131  MAFSTGFRLCRSYYSRISYPVL-----RPDIRFSDIRFLSXXXXXXXXXXXXXXXXKAGG 295
            MA S+G R+      +++ P++     R  +  S++RFLS                +   
Sbjct: 1    MASSSGLRISYLLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDE 60

Query: 296  NIEAEPQDG-DGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVR 472
             ++ E  DG DGNGSV +K    G+DG RIV T LHKEAT+AYMAYAMSVLLGRALPDVR
Sbjct: 61   PVKDEGDDGQDGNGSVAVKKDGGGSDG-RIVHTALHKEATDAYMAYAMSVLLGRALPDVR 119

Query: 473  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 652
            DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSL
Sbjct: 120  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSL 179

Query: 653  RCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPS 832
            R PLI GHGNFGSIDADPPAAMRYTECR               NTVDFVPNFDNSQKEPS
Sbjct: 180  RSPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPS 239

Query: 833  XXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDF 1012
                        GSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLEYMPGPDF
Sbjct: 240  LLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDF 299

Query: 1013 PTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEK 1192
            PTGG+IMGN GIL+AYR+GRGRI +RGKT++E++DS+TKR A+IIKEIPYQTNK++LVE+
Sbjct: 300  PTGGLIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVER 359

Query: 1193 IAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVG 1372
            IAELVE K+L+GISDIRDESDR+GMRIVIELKRG++PSIV NNLYR T+LQ+SFSCNMVG
Sbjct: 360  IAELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVG 419

Query: 1373 ILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQV 1552
            I+NGQPKLMGL+ELL+AFLDFRCSVVERRA+FKL  AQ+RRHIVEG+++GLDNLDGVI++
Sbjct: 420  IINGQPKLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRL 479

Query: 1553 VKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEE 1732
            ++ AS+++ A+A L  ++NLS+KQAEA+LDI+LR+LT LER KFI+E KSL E IS+LEE
Sbjct: 480  IREASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLEE 539

Query: 1733 LLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYV 1912
            LLSS+  ILQ+IEQEA ELK KF  PR+S+LED+D G +EDIDVIPNE+M+LA SEKGYV
Sbjct: 540  LLSSRNNILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEKGYV 599

Query: 1913 KRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPE 2092
            KRMKP+ FNLQ+RGTIGKSVGKLRVND MSDFIVC AHDH+LYFSDKG VYSARA+KIPE
Sbjct: 600  KRMKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYKIPE 659

Query: 2093 CTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRIT 2272
            C RTAAGTPLVQ+LSLSDGERITSIIPVS+F   Q+L+MLTA GYIKKV LN FSSIR T
Sbjct: 660  CGRTAAGTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYGYIKKVSLNFFSSIRST 719

Query: 2273 GIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEG 2452
            GIIAIQLV GDELKWVR CT+D+LVAMASQNGM +LSSC +IR+ GRNTRG VAM+LK G
Sbjct: 720  GIIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTG 779

Query: 2453 DNMASIDVIPAAMRKNLELGSEAHSSRLSGPWLLFVSESGYGKRVPLSRFRISTRNRVGL 2632
            D MAS+D+IPAA+  +LE  S   S   +GPWLLFVSESG GKRVPL  FR+S   RVGL
Sbjct: 780  DKMASMDIIPAAVWNDLERNSSKSS---NGPWLLFVSESGVGKRVPLKSFRLSPLRRVGL 836

Query: 2633 IGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVIL 2812
            IG KF+++D+L AVFVVG+S+++DGESDEQ+VLVSQSGTVNRIKVRD+SIQSR+ARGVIL
Sbjct: 837  IGCKFSSQDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDVSIQSRFARGVIL 896

Query: 2813 MRLDHAGKIQSASLMSASEPDTE 2881
            MRLDHAGKIQSASL+SA+E + E
Sbjct: 897  MRLDHAGKIQSASLISAAETEPE 919


>gb|ESW25277.1| hypothetical protein PHAVU_003G022300g [Phaseolus vulgaris]
          Length = 942

 Score = 1301 bits (3368), Expect = 0.0
 Identities = 674/940 (71%), Positives = 775/940 (82%), Gaps = 7/940 (0%)
 Frame = +2

Query: 83   LPWSDPILQASTHPKSMAFSTGFRLCRSYYSRISYPVLRPDIRFSDIRFLSXXXXXXXXX 262
            L + +P L  +    SMAFS+  R+ R          L P ++ S +R            
Sbjct: 6    LHFQNPNLLCTNPSPSMAFSSALRVLR----------LSPFLQPSRLRLSPSHPRLLSPF 55

Query: 263  XXXXXXXKAGGNIEAEPQD---GDGNGSVTIK-DKASGNDGERIVPTELHKEATEAYMAY 430
                   +A     A  +     D NGSVT   D  +G++G R+VPTELHKEATEAYMAY
Sbjct: 56   QPRLISARASRRPAAAVKAVRRSDENGSVTATADSGNGSEG-RVVPTELHKEATEAYMAY 114

Query: 431  AMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTA 610
            AMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KPFKKCARVVGEVLGKFHPHGDTA
Sbjct: 115  AMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTA 174

Query: 611  VYDSLVRMAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTV 790
            VYDSLVRMAQDFSLR PLI GHGNFGSIDADPPAAMRYTECR               +TV
Sbjct: 175  VYDSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLADLEQDTV 234

Query: 791  DFVPNFDNSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEA 970
            DFVPNFDNSQKEPS            GSSGIAVGMATNIPPHNLGE+VD L VLIHNPEA
Sbjct: 235  DFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEA 294

Query: 971  TLQELLEYMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIK 1150
            TLQELLEYMPGPDFPTGG+IMGN+GILDAYR+GRGR+++RGKTDIE++DS+TKR AIIIK
Sbjct: 295  TLQELLEYMPGPDFPTGGLIMGNLGILDAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIK 354

Query: 1151 EIPYQTNKASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYR 1330
            EIPYQTNKASLVEKIAE+VE KSL+GISDIRDESDRSGMRIVIELKRGS+P IVLNNLYR
Sbjct: 355  EIPYQTNKASLVEKIAEVVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYR 414

Query: 1331 HTALQTSFSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEG 1510
             T+LQ++FSCNMVGILNGQPK MGL+ELL+AFLDFRCSVVERRA FKLSQA+ R+HIVEG
Sbjct: 415  LTSLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSQARGRKHIVEG 474

Query: 1511 VIVGLDNLDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIE 1690
            +++G DNLD VI++++ AS+N+ AA  L   ++LS+KQAEA+LD+SLR+LT  E   F+ 
Sbjct: 475  ILIGFDNLDEVIRIIREASSNSAAAVGLRNAFSLSEKQAEALLDMSLRRLTLRESGNFVA 534

Query: 1691 EGKSLTEQISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIP 1870
            E KSL EQIS+LEELLSS+K IL++IEQEA+ELK+KF+ PR+SMLED+D G LEDIDVIP
Sbjct: 535  ESKSLMEQISKLEELLSSRKNILELIEQEAIELKNKFANPRRSMLEDTDNGQLEDIDVIP 594

Query: 1871 NEDMILAVSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSD 2050
            NEDM+LAVSEKGY+KRMKP  FNLQNRGTIGKSVGKLRVND+MSDF+VC AHDH+LYFSD
Sbjct: 595  NEDMLLAVSEKGYLKRMKPSTFNLQNRGTIGKSVGKLRVNDSMSDFLVCRAHDHVLYFSD 654

Query: 2051 KGTVYSARAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYI 2230
            KGTVYSARA+K+PEC+RTAAGTPLV ILSLSDGERITSIIPVS+F + Q+L+MLT  GYI
Sbjct: 655  KGTVYSARAYKVPECSRTAAGTPLVHILSLSDGERITSIIPVSEFVEDQFLLMLTMQGYI 714

Query: 2231 KKVPLNLFSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQG 2410
            K+V LNLFSSIR TGIIAIQLVPGDELKWVR C++DD VAMAS NGM +L  C  IR+  
Sbjct: 715  KRVSLNLFSSIRSTGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLCQCSKIRTLS 774

Query: 2411 RNTRGGVAMRLKEGDNMASIDVIPAAMRKNLELGS---EAHSSRLSGPWLLFVSESGYGK 2581
            RNTRG +AMRLK GD+MAS+D+IPAAM  NLE  S   +       GPWLLFVSE+G+GK
Sbjct: 775  RNTRGSLAMRLKNGDSMASVDIIPAAMWNNLETLSKYPDNSGKGQKGPWLLFVSENGHGK 834

Query: 2582 RVPLSRFRISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRI 2761
            RVPLS FR+S+ NRVGL+GYKF+AED+L AVFVVG+S ++DGESDEQ+VLVSQ+GTVNRI
Sbjct: 835  RVPLSSFRVSSLNRVGLVGYKFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQTGTVNRI 894

Query: 2762 KVRDISIQSRYARGVILMRLDHAGKIQSASLMSASEPDTE 2881
            KVRDISIQSR+ARGVILMRLD+AGKIQSASL+SA++ + E
Sbjct: 895  KVRDISIQSRFARGVILMRLDYAGKIQSASLISATDCEPE 934


>ref|XP_006485535.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Citrus sinensis]
          Length = 942

 Score = 1288 bits (3334), Expect = 0.0
 Identities = 652/865 (75%), Positives = 751/865 (86%), Gaps = 3/865 (0%)
 Frame = +2

Query: 299  IEAEPQDGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVRDG 478
            + ++ ++ +GNGSV        N   RIVP ELH+E T +Y+ Y+MSVLLGRALPDVRDG
Sbjct: 60   LASKDEERNGNGSVAT---VGPNVSPRIVPVELHEEMTGSYITYSMSVLLGRALPDVRDG 116

Query: 479  LKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRC 658
            LKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLR 
Sbjct: 117  LKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRY 176

Query: 659  PLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSXX 838
            PLI GHGNFGSIDADP AAMRYTECR               +TV+FVPNFD SQKEPS  
Sbjct: 177  PLIRGHGNFGSIDADPAAAMRYTECRLEALSEAMLLADIDQDTVNFVPNFDESQKEPSLL 236

Query: 839  XXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPT 1018
                      G+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMPGPDFPT
Sbjct: 237  PARLPTLLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPGPDFPT 296

Query: 1019 GGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKIA 1198
            GG+IMGN+GILDAYR+GRGRI +RGKT++E++DS++KR  +IIKEIPYQTNK+ LVEKIA
Sbjct: 297  GGLIMGNLGILDAYRTGRGRITVRGKTEVELLDSKSKRMGVIIKEIPYQTNKSMLVEKIA 356

Query: 1199 ELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGIL 1378
            ELVE K+L+GISDIRDESDRSGMRIVIELKRG++PSIV+N+LYR TALQ+SFSCNMVGIL
Sbjct: 357  ELVENKTLDGISDIRDESDRSGMRIVIELKRGADPSIVVNSLYRLTALQSSFSCNMVGIL 416

Query: 1379 NGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVVK 1558
            +GQPK MGL+E+L+AFLDFRCSVVERRA+FKLSQ ++RRHIVEG++VGLDNLD VI++V+
Sbjct: 417  DGQPKQMGLKEVLQAFLDFRCSVVERRARFKLSQVKERRHIVEGIMVGLDNLDRVIRIVR 476

Query: 1559 SASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELL 1738
             A +N+TA+A L  E+ LS+KQA+AILD++LR+LT LER KF++E K+L EQI +LEELL
Sbjct: 477  EAPSNSTASAALKDEFKLSEKQADAILDMNLRRLTMLERKKFVDESKTLMEQILKLEELL 536

Query: 1739 SSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKR 1918
            SS+K ILQ+IEQEA+ELK++FSTPR SMLED+D G L+DID+IPN++M+LA+SEKGYVKR
Sbjct: 537  SSRKNILQLIEQEAIELKNRFSTPRLSMLEDADSGQLDDIDIIPNDEMLLAISEKGYVKR 596

Query: 1919 MKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECT 2098
            MKP+ FNLQNRGTIGKSVGKLRVND MSDFIVC AHDH+LYFSD+G VYSARA+KIPECT
Sbjct: 597  MKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDRGIVYSARAYKIPECT 656

Query: 2099 RTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGI 2278
            R AAGTPLVQILSLSDGERITSIIPVS+F   Q+L+MLT NGYIKKV LNLFSSIR TGI
Sbjct: 657  RNAAGTPLVQILSLSDGERITSIIPVSEFAGDQFLVMLTMNGYIKKVSLNLFSSIRTTGI 716

Query: 2279 IAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDN 2458
            IAIQLVPGDELKWVRCCT+DDLVAMASQNGM +LSSC  IRS  RNTRG VAMRLK+GD 
Sbjct: 717  IAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCDIIRSLSRNTRGSVAMRLKDGDK 776

Query: 2459 MASIDVIPAAMRKNLELGSEAHSSRL---SGPWLLFVSESGYGKRVPLSRFRISTRNRVG 2629
            MAS+D+IPAA+ K+LE   E   S +   SGPWLLFVSESG+GKRVPLS FR    NRVG
Sbjct: 777  MASMDIIPAALHKDLERTPEDSHSNVKGSSGPWLLFVSESGHGKRVPLSSFRKLPLNRVG 836

Query: 2630 LIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVI 2809
            LIGYKF+AED+L AVFVVG+S+++DGESDEQ+VLVSQSGTVNRIKVRDISIQ+RYARGVI
Sbjct: 837  LIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQARYARGVI 896

Query: 2810 LMRLDHAGKIQSASLMSASEPDTEL 2884
            LMRL+ +GKIQSASL+S +EP+T+L
Sbjct: 897  LMRLELSGKIQSASLISVTEPETDL 921


>ref|XP_006829870.1| hypothetical protein AMTR_s00119p00135690 [Amborella trichopoda]
            gi|548835451|gb|ERM97286.1| hypothetical protein
            AMTR_s00119p00135690 [Amborella trichopoda]
          Length = 963

 Score = 1269 bits (3285), Expect = 0.0
 Identities = 653/948 (68%), Positives = 762/948 (80%), Gaps = 25/948 (2%)
 Frame = +2

Query: 107  QASTHPKSMAFSTGFRLCRSYYSRISYPVLR--------PDIRFSDIRFLSXXXXXXXXX 262
            + ++ P  MAFS+  RL      R  +  L+        P ++  + RF S         
Sbjct: 12   KTTSFPSLMAFSSSLRLATKTLVRFHHSSLQLHGSFTCFPHLQTPNYRFFSVKKEVRLLS 71

Query: 263  XXXXXXXKAGGNIEAEPQDGD-----------------GNGSVTIKDKASGNDGERIVPT 391
                   K  G + A+ +DG                  GNG V +K+KA      R+V  
Sbjct: 72   GVSRGPGKGSGVVRAKRRDGGDEGKGEKKALENDDAEGGNGGVMVKEKAFE---ARVVMA 128

Query: 392  ELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVG 571
            ELHKEATE+Y+AYA+SVL+GRALPDVRDGLKPVHRRI+FAMHELG SSRKPFKKCARVVG
Sbjct: 129  ELHKEATESYLAYALSVLVGRALPDVRDGLKPVHRRIIFAMHELGFSSRKPFKKCARVVG 188

Query: 572  EVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLINGHGNFGSIDADPPAAMRYTECRXXXXX 751
            EVLGKFHPHGDTAVYDSLVRMAQDFS+RCPLI GHGNFGSIDADPPAAMRYTECR     
Sbjct: 189  EVLGKFHPHGDTAVYDSLVRMAQDFSMRCPLIQGHGNFGSIDADPPAAMRYTECRLEALT 248

Query: 752  XXXXXXXXXXNTVDFVPNFDNSQKEPSXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGEL 931
                      NTV+FVPNFD SQKEPS            GSSGIAVGMATNIPPHNLGEL
Sbjct: 249  EAMFLSDLEQNTVNFVPNFDGSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGEL 308

Query: 932  VDALSVLIHNPEATLQELLEYMPGPDFPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEI 1111
            VDALSVL+HNP+ATLQELLEYMPGPDFPTGG IMGN+GILDAYR+GRGRIV+RGKTD+E+
Sbjct: 309  VDALSVLLHNPDATLQELLEYMPGPDFPTGGEIMGNIGILDAYRTGRGRIVVRGKTDVEV 368

Query: 1112 IDSRTKRAAIIIKEIPYQTNKASLVEKIAELVEAKSLEGISDIRDESDRSGMRIVIELKR 1291
            +D++ K +A++I+EIPYQTNKASLVEKIAELVE KS+EG+SDIRDESDRSGMRIVIELK+
Sbjct: 369  LDAKGKLSALVIREIPYQTNKASLVEKIAELVEDKSIEGVSDIRDESDRSGMRIVIELKK 428

Query: 1292 GSEPSIVLNNLYRHTALQTSFSCNMVGILNGQPKLMGLRELLKAFLDFRCSVVERRAQFK 1471
            GS+PSIVLN LY+ T LQ+SFSCNMVGIL+GQPKLMGL+E+L+AFLDFRCSV+ERRA+FK
Sbjct: 429  GSDPSIVLNKLYKLTVLQSSFSCNMVGILDGQPKLMGLKEMLQAFLDFRCSVIERRARFK 488

Query: 1472 LSQAQDRRHIVEGVIVGLDNLDGVIQVVKSASNNATAAADLMREYNLSQKQAEAILDISL 1651
            L QAQ+R HI+EG++VGLDNLD VI +++  S+ + A+A L + YNLS KQAEA+LDI+L
Sbjct: 489  LKQAQEREHIIEGILVGLDNLDDVIHLIRENSSLSMASAALKKAYNLSDKQAEALLDITL 548

Query: 1652 RKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQILQVIEQEAMELKSKFSTPRQSMLED 1831
            RKLTSLER KF+EEG+SL EQIS+L ELLSSKK + Q+IEQEA+E+K+KF TPR+S LE+
Sbjct: 549  RKLTSLERKKFVEEGESLKEQISKLNELLSSKKLVYQMIEQEAIEVKNKFRTPRRSSLEE 608

Query: 1832 SDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFI 2011
             D   LE+IDVIPNE+M+L  SEKGYVKRM+P+ F+LQNRGTIGKSVGK+RVND +SDFI
Sbjct: 609  GDGSQLEEIDVIPNEEMLLVFSEKGYVKRMRPNTFSLQNRGTIGKSVGKMRVNDALSDFI 668

Query: 2012 VCHAHDHILYFSDKGTVYSARAFKIPECTRTAAGTPLVQILSLSDGERITSIIPVSDFND 2191
            VCHAHDH+LYFSDKG VYSARAF+IPECTRTAAGTPLVQILSLSDGERITS+IPVS+F  
Sbjct: 669  VCHAHDHVLYFSDKGIVYSARAFRIPECTRTAAGTPLVQILSLSDGERITSVIPVSEFVK 728

Query: 2192 QQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGM 2371
             QYLIMLTA G+IKK+ L  FS+IRITGIIAIQLVPGDELKWVR C++DDL+AMASQ+GM
Sbjct: 729  DQYLIMLTAKGFIKKISLEFFSAIRITGIIAIQLVPGDELKWVRLCSNDDLIAMASQSGM 788

Query: 2372 ALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASIDVIPAAMRKNLELGSEAHSSRLSGPWL 2551
             LLSSC ++R+ GR  RG V+MRLK+GD MAS+D+IPAAM+KNL    +     LS PWL
Sbjct: 789  VLLSSCETLRAIGRTARGVVSMRLKDGDRMASMDIIPAAMQKNL----QKEGKDLSAPWL 844

Query: 2552 LFVSESGYGKRVPLSRFRISTRNRVGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVL 2731
            LFV+ESGYGKRVP+S FR++   R G+IGYK    D L AVF VG+S+S DGESDEQ+VL
Sbjct: 845  LFVTESGYGKRVPVSSFRMTRFRRKGVIGYKLPPNDGLAAVFAVGFSLSADGESDEQVVL 904

Query: 2732 VSQSGTVNRIKVRDISIQSRYARGVILMRLDHAGKIQSASLMSASEPD 2875
            VSQSGTVNRIKVRDISIQSR A GVILMRL+ AGKI SASLMSA+E D
Sbjct: 905  VSQSGTVNRIKVRDISIQSRSAMGVILMRLEFAGKIMSASLMSATEAD 952


>ref|XP_006296680.1| hypothetical protein CARUB_v10012909mg [Capsella rubella]
            gi|482565389|gb|EOA29578.1| hypothetical protein
            CARUB_v10012909mg [Capsella rubella]
          Length = 950

 Score = 1267 bits (3279), Expect = 0.0
 Identities = 634/880 (72%), Positives = 754/880 (85%), Gaps = 9/880 (1%)
 Frame = +2

Query: 290  GGNIEAEPQDGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDV 469
            G    A+ Q  DG+GS       SG+D  RIVP ELHKEATE+YM+YA+SVLLGRALPDV
Sbjct: 72   GAAKRADEQFKDGSGSNNGGLVVSGDDS-RIVPFELHKEATESYMSYALSVLLGRALPDV 130

Query: 470  RDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFS 649
            RDGLKPVHRRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ FS
Sbjct: 131  RDGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFS 190

Query: 650  LRCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEP 829
            LRCPLI GHGNFGSIDADPPAAMRYTECR               +TVDFV NFDNSQKEP
Sbjct: 191  LRCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEP 250

Query: 830  SXXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPD 1009
            +            G+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PD
Sbjct: 251  AVLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPD 310

Query: 1010 FPTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVE 1189
            FPTGG+IMGN+G+LDAYR+GRGR+V+RGK ++E++D +TKR A+II EIPYQTNKA+LV+
Sbjct: 311  FPTGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQ 370

Query: 1190 KIAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMV 1369
            KIAELVE K+LEGISDIRDESDR+GMR+VIELKRG +P++VLNNLYRHTALQ+SFSCNMV
Sbjct: 371  KIAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMV 430

Query: 1370 GILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQ 1549
            GI +G+PKLMGL+ELL+AF+DFRCSVVERRA+FKLS AQ R+HI+EG++VGLDN+D VIQ
Sbjct: 431  GICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNMDKVIQ 490

Query: 1550 VVKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLE 1729
            ++K+A+++++AA  L  EY LS+KQA+AIL+ISLR+LT+LER KF +E  SLTEQI++LE
Sbjct: 491  LIKNATSHSSAATALQSEYGLSEKQADAILEISLRRLTALERKKFTDESSSLTEQITKLE 550

Query: 1730 ELLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGY 1909
            +LLS++  IL++IEQEA+ELK +FS+PR+SMLEDSD G LEDIDVIPNE+M++A+SEKGY
Sbjct: 551  QLLSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGY 610

Query: 1910 VKRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIP 2089
            VKRMKPD FNLQ+RGTIGKSVGKLRV+D MSDF+VCHAHDH+L+FSD+G VYS RA+KIP
Sbjct: 611  VKRMKPDTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIP 670

Query: 2090 ECTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRI 2269
            EC+R AAGTPLVQILS+S+GER+TSI+PVS+F + +YL+MLT NG IKKV L LFS IR 
Sbjct: 671  ECSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRS 730

Query: 2270 TGIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKE 2449
            TGIIAIQL  GDELKWVRCC+ DDLVAMASQNGM +LS+C  +R+  RNT+G  AMRLK+
Sbjct: 731  TGIIAIQLNSGDELKWVRCCSSDDLVAMASQNGMVVLSTCDGVRTLSRNTKGVTAMRLKK 790

Query: 2450 GDNMASIDVIPAAMRKNLELGSEAHSS--RLSGPWLLFVSESGYGKRVPLSRFRISTRNR 2623
             D MAS+D+IP+++RK++E  SE  S+  + +GPWLLFV E+GYGKRVPLS FR S  NR
Sbjct: 791  EDKMASMDIIPSSLRKDMEEKSEDISTVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNR 850

Query: 2624 VGLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARG 2803
            VGL+GYKFA +D+L AVFVVGYS+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR ARG
Sbjct: 851  VGLLGYKFAEDDRLAAVFVVGYSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARG 910

Query: 2804 VILMRLDHAGKIQSASLMSASE-------PDTELMEGANM 2902
            VILMRLDHAGKIQSASL+SA++       P TE +E  ++
Sbjct: 911  VILMRLDHAGKIQSASLISAADEEETEEIPSTETIEAVSL 950


>ref|NP_187680.2| DNA gyrase subunit A [Arabidopsis thaliana]
            gi|110808536|sp|Q9CAF6.2|GYRA_ARATH RecName:
            Full=Probable DNA gyrase subunit A,
            chloroplastic/mitochondrial; Flags: Precursor
            gi|332641422|gb|AEE74943.1| DNA gyrase subunit A
            [Arabidopsis thaliana]
          Length = 950

 Score = 1258 bits (3256), Expect = 0.0
 Identities = 630/878 (71%), Positives = 746/878 (84%), Gaps = 2/878 (0%)
 Frame = +2

Query: 293  GNIEAEPQDGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVR 472
            G+ + + + G  NG + +       D  RIVP ELHKEATE+YM+YA+SVLLGRALPDVR
Sbjct: 77   GDEQVKEESGANNGGLVVS-----GDESRIVPFELHKEATESYMSYALSVLLGRALPDVR 131

Query: 473  DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 652
            DGLKPVHRRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ FSL
Sbjct: 132  DGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSL 191

Query: 653  RCPLINGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPS 832
            RCPLI GHGNFGSIDADPPAAMRYTECR               +TVDFV NFDNSQKEP+
Sbjct: 192  RCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPA 251

Query: 833  XXXXXXXXXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDF 1012
                        G+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDF
Sbjct: 252  VLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDF 311

Query: 1013 PTGGVIMGNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEK 1192
            PTGG+IMGN+G+LDAYR+GRGR+V+RGK ++E++D +TKR A+II EIPYQTNKA+LV+K
Sbjct: 312  PTGGIIMGNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQK 371

Query: 1193 IAELVEAKSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVG 1372
            IAELVE K+LEGISDIRDESDR+GMR+VIELKRG +P++VLNNLYRHTALQ+SFSCNMVG
Sbjct: 372  IAELVENKTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVG 431

Query: 1373 ILNGQPKLMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQV 1552
            I +G+PKLMGL+ELL+AF+DFRCSVVERRA+FKLS AQ R+HI+EG++VGLDN+D VI++
Sbjct: 432  ICDGEPKLMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNVDEVIEL 491

Query: 1553 VKSASNNATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEE 1732
            +  AS++++A A L  EY LS+KQAEAIL+I+LR+LT+LER KF +E  SLTEQI++LE+
Sbjct: 492  ITKASSHSSATAALQSEYGLSEKQAEAILEITLRRLTALERKKFTDESSSLTEQITKLEQ 551

Query: 1733 LLSSKKQILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYV 1912
            LLS++  IL++IEQEA+ELK +FS+PR+SMLEDSD G LEDIDVIPNE+M++AVSEKGYV
Sbjct: 552  LLSTRTNILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAVSEKGYV 611

Query: 1913 KRMKPDVFNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPE 2092
            KRMK D FNLQ+RGTIGKSVGKLRV+D MSDF+VCHAHDH+L+FSD+G VYS RA+KIPE
Sbjct: 612  KRMKADTFNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPE 671

Query: 2093 CTRTAAGTPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRIT 2272
            C+R AAGTPLVQILS+S+GER+TSI+PVS+F + +YL+MLT NG IKKV L LFS IR T
Sbjct: 672  CSRNAAGTPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRST 731

Query: 2273 GIIAIQLVPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEG 2452
            GIIAIQL  GDELKWVRCC+ DDLVAMASQNGM  LS+C  +R+  RNT+G  AMRLK  
Sbjct: 732  GIIAIQLNSGDELKWVRCCSSDDLVAMASQNGMVALSTCDGVRTLSRNTKGVTAMRLKNE 791

Query: 2453 DNMASIDVIPAAMRKNLELGSEAHS--SRLSGPWLLFVSESGYGKRVPLSRFRISTRNRV 2626
            D +AS+D+IPA++RK++E  SE  S   + +GPWLLFV E+GYGKRVPLS FR S  NRV
Sbjct: 792  DKIASMDIIPASLRKDMEEKSEDASLVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNRV 851

Query: 2627 GLIGYKFAAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGV 2806
            GL GYKFA +D+L AVFVVGYS+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR ARGV
Sbjct: 852  GLSGYKFAEDDRLAAVFVVGYSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGV 911

Query: 2807 ILMRLDHAGKIQSASLMSASEPDTELMEGANMDELVQS 2920
            ILMRLDHAGKIQSASL+SA+  D E  EG   +E V++
Sbjct: 912  ILMRLDHAGKIQSASLISAA--DEEETEGTLSNEAVEA 947


>ref|XP_002884807.1| DNA gyrase subunit A family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297330647|gb|EFH61066.1| DNA gyrase subunit A
            family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 950

 Score = 1252 bits (3239), Expect = 0.0
 Identities = 625/871 (71%), Positives = 744/871 (85%), Gaps = 2/871 (0%)
 Frame = +2

Query: 314  QDGDGNGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVH 493
            + G  NG + +       D  RIVP ELHKEATE+YMAYA+SVLLGRALPDVRDGLKPVH
Sbjct: 84   ESGANNGGLVVS-----GDESRIVPFELHKEATESYMAYALSVLLGRALPDVRDGLKPVH 138

Query: 494  RRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLING 673
            RRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ FSLRCPLI G
Sbjct: 139  RRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRCPLIQG 198

Query: 674  HGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSXXXXXXX 853
            HGNFGSIDADPPAAMRYTECR               +TVDFV NFDNSQKEP+       
Sbjct: 199  HGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPAVLPARLP 258

Query: 854  XXXXXGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGVIM 1033
                 G+SGIAVGMATNIPPHNLGELVD L  LIHNPEATLQELLEYMP PDFPTGG+IM
Sbjct: 259  ALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIM 318

Query: 1034 GNMGILDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKIAELVEA 1213
            GN+G+LDAYR+GRGR+V+RGK ++E++D +TKR A+II EIPYQTNKA+LV+KIAELVE 
Sbjct: 319  GNLGVLDAYRTGRGRVVVRGKAEVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVEN 378

Query: 1214 KSLEGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGILNGQPK 1393
            K+LEGISDIRDESDR+GMR+VIELKRG +P++VLNNLYRHTALQ+SFSCNMVGI +G+PK
Sbjct: 379  KTLEGISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVGICDGEPK 438

Query: 1394 LMGLRELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVVKSASNN 1573
            LMGL+ELL+AF+DFRCSVVERRA+FKLS AQ R+H +EG++VGLDN+D VI+++K+AS++
Sbjct: 439  LMGLKELLQAFIDFRCSVVERRARFKLSHAQQRKHNIEGIVVGLDNVDEVIKLIKNASSH 498

Query: 1574 ATAAADLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQ 1753
            ++A+A L  EY LS+KQAEAIL+I+LR+LT+LER K  +E  SLTEQI++LE+LLS++  
Sbjct: 499  SSASAALQSEYGLSEKQAEAILEITLRRLTTLERKKVTDESSSLTEQITKLEQLLSTRAN 558

Query: 1754 ILQVIEQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDV 1933
            IL++IEQEA+ELK +FS+PR+SMLEDSD G LEDIDVIPNE+M++A+SEKGYVK+MK D 
Sbjct: 559  ILKLIEQEAIELKDRFSSPRRSMLEDSDSGDLEDIDVIPNEEMLMAISEKGYVKKMKADT 618

Query: 1934 FNLQNRGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAAG 2113
            FNLQ+RGTIGKSVGKLRV+D MSDF+VCHAHDH+L+FSD+G VYS RA+KIPEC+R AAG
Sbjct: 619  FNLQHRGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPECSRNAAG 678

Query: 2114 TPLVQILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQL 2293
            TPLVQILS+S+GER+TSI+PVS+F + +YL+MLT NG IKKV L LFS IR TGIIAIQL
Sbjct: 679  TPLVQILSMSEGERVTSIVPVSEFAEDRYLLMLTVNGCIKKVSLKLFSGIRSTGIIAIQL 738

Query: 2294 VPGDELKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASID 2473
              GDELKWVRCC+ DDLVAMASQNG+ +LS+C  +R+  RNT+G  AMRLK  D +AS+D
Sbjct: 739  NSGDELKWVRCCSSDDLVAMASQNGLVVLSTCDGVRTLSRNTKGVTAMRLKNEDKIASMD 798

Query: 2474 VIPAAMRKNLELGSEAHS--SRLSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGYKF 2647
            +IPA++RK++E  SE  S   + +GPWLLFV E+GYGKRVPLS FR S  NRVGL GYKF
Sbjct: 799  IIPASLRKDMEEKSEDASIVKQSTGPWLLFVCENGYGKRVPLSSFRRSRLNRVGLSGYKF 858

Query: 2648 AAEDQLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDH 2827
            A +D+L AVFVVGYS+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR ARGVILMRLDH
Sbjct: 859  AEDDRLAAVFVVGYSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGVILMRLDH 918

Query: 2828 AGKIQSASLMSASEPDTELMEGANMDELVQS 2920
            AGKIQSASL+SA+  D E  EG   +E +++
Sbjct: 919  AGKIQSASLISAA--DEEETEGTPTNETLEA 947


>ref|XP_006407519.1| hypothetical protein EUTSA_v10020005mg [Eutrema salsugineum]
            gi|557108665|gb|ESQ48972.1| hypothetical protein
            EUTSA_v10020005mg [Eutrema salsugineum]
          Length = 937

 Score = 1242 bits (3214), Expect = 0.0
 Identities = 617/850 (72%), Positives = 734/850 (86%), Gaps = 3/850 (0%)
 Frame = +2

Query: 329  NGSVTIKDKASGNDGERIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILF 508
            NG   + + A+  D  RIVP ELHKEATE+YM+YA+SVLLGRALPDVRDGLKPVHRRILF
Sbjct: 73   NGDSVVSEDANNGDS-RIVPFELHKEATESYMSYALSVLLGRALPDVRDGLKPVHRRILF 131

Query: 509  AMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLINGHGNFG 688
            AMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ FSLR PLI GHGNFG
Sbjct: 132  AMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSLRSPLIQGHGNFG 191

Query: 689  SIDADPPAAMRYTECRXXXXXXXXXXXXXXXNTVDFVPNFDNSQKEPSXXXXXXXXXXXX 868
            SIDADP AAMRYTECR               +TVDFV NFDNSQKEP+            
Sbjct: 192  SIDADPAAAMRYTECRLDPLAEAILLADLDQDTVDFVANFDNSQKEPAVLPARLPALLLN 251

Query: 869  GSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGVIMGNMGI 1048
            G+ GIAVGMAT IPPHNLGE+VD L  LIHNPEATLQELLEYMP PDFPTGG+IMGN+G+
Sbjct: 252  GAHGIAVGMATAIPPHNLGEVVDVLCALIHNPEATLQELLEYMPAPDFPTGGIIMGNLGV 311

Query: 1049 LDAYRSGRGRIVLRGKTDIEIIDSRTKRAAIIIKEIPYQTNKASLVEKIAELVEAKSLEG 1228
            LDAYR+G+GR+V+RGKT +E++D +TKR A+II EIPYQTNKA+LV+KIAELVE K+LEG
Sbjct: 312  LDAYRTGKGRVVVRGKTHVELLDPKTKRNAVIITEIPYQTNKATLVQKIAELVENKTLEG 371

Query: 1229 ISDIRDESDRSGMRIVIELKRGSEPSIVLNNLYRHTALQTSFSCNMVGILNGQPKLMGLR 1408
            ISDIRDESDR+GMR+VIELKRG +P++VLNNLYRHTALQ+SFSCNMV I NG+PK MGL+
Sbjct: 372  ISDIRDESDRNGMRVVIELKRGGDPALVLNNLYRHTALQSSFSCNMVSICNGEPKQMGLK 431

Query: 1409 ELLKAFLDFRCSVVERRAQFKLSQAQDRRHIVEGVIVGLDNLDGVIQVVKSASNNATAAA 1588
            ELL+AF+DFRCSVVERRA+FKLS AQ R+HI+EG++VGLDN+D VIQ++K AS++++AAA
Sbjct: 432  ELLQAFIDFRCSVVERRARFKLSHAQQRKHIIEGIVVGLDNMDEVIQLIKKASSHSSAAA 491

Query: 1589 DLMREYNLSQKQAEAILDISLRKLTSLERNKFIEEGKSLTEQISRLEELLSSKKQILQVI 1768
             L  EY LS+KQAEAIL+ISLR+LT+LER KF +E  SLTEQI++L++LLSS+  IL++I
Sbjct: 492  ALQSEYGLSEKQAEAILEISLRRLTALERKKFTDESSSLTEQITKLDQLLSSRTNILKLI 551

Query: 1769 EQEAMELKSKFSTPRQSMLEDSDCGLLEDIDVIPNEDMILAVSEKGYVKRMKPDVFNLQN 1948
            EQEA+ELK +FS+PR+SMLEDSD G L+DIDVIPN++M++AVSEKGYVKRMKPD FNLQ+
Sbjct: 552  EQEAIELKDRFSSPRRSMLEDSDSGDLDDIDVIPNDEMLMAVSEKGYVKRMKPDTFNLQH 611

Query: 1949 RGTIGKSVGKLRVNDTMSDFIVCHAHDHILYFSDKGTVYSARAFKIPECTRTAAGTPLVQ 2128
            RGTIGKSVGKLRV+D MSDF+VCHAHDH+L+FSD+G VYS RA+KIPEC+R AAGTPLVQ
Sbjct: 612  RGTIGKSVGKLRVDDAMSDFLVCHAHDHVLFFSDRGIVYSTRAYKIPECSRNAAGTPLVQ 671

Query: 2129 ILSLSDGERITSIIPVSDFNDQQYLIMLTANGYIKKVPLNLFSSIRITGIIAIQLVPGDE 2308
            ILS+S+GER+TSI+P+S+F + QYL+MLT NG IKKVPL LFS IR TGIIAIQL  GDE
Sbjct: 672  ILSMSEGERVTSIVPISEFAEDQYLLMLTVNGCIKKVPLKLFSGIRSTGIIAIQLNSGDE 731

Query: 2309 LKWVRCCTDDDLVAMASQNGMALLSSCGSIRSQGRNTRGGVAMRLKEGDNMASIDVIPAA 2488
            LKWVRCC+ +DLVAMASQNGM +LS+C  +R+  RNT+G  AMRL++ D MAS+D+IPA+
Sbjct: 732  LKWVRCCSSNDLVAMASQNGMVVLSTCDGVRTLSRNTKGVTAMRLRKEDKMASMDIIPAS 791

Query: 2489 MRKNLELGSEAHSS---RLSGPWLLFVSESGYGKRVPLSRFRISTRNRVGLIGYKFAAED 2659
            +RK++E   E  S+   + +GPWLLFV E+G+GKRVPLS F+ S  NRVGLIG KFA +D
Sbjct: 792  LRKDIEEKPEDASTVGKQSTGPWLLFVCENGHGKRVPLSSFKPSRLNRVGLIGSKFAEDD 851

Query: 2660 QLVAVFVVGYSVSDDGESDEQIVLVSQSGTVNRIKVRDISIQSRYARGVILMRLDHAGKI 2839
            +L AVFVVGYS+++DGESDEQ+VLVSQSGTVNRIKVRDISIQSR ARGVILMRLDHAGKI
Sbjct: 852  RLAAVFVVGYSLAEDGESDEQVVLVSQSGTVNRIKVRDISIQSRRARGVILMRLDHAGKI 911

Query: 2840 QSASLMSASE 2869
            QSASL+SA++
Sbjct: 912  QSASLISAAD 921