BLASTX nr result
ID: Rheum21_contig00003285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00003285
(730 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ10833.1| hypothetical protein PRUPE_ppa011860mg [Prunus pe... 229 7e-58
ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici... 224 2e-56
gb|EOY20734.1| Ribosomal protein L12/ ATP-dependent Clp protease... 222 9e-56
gb|AFK35058.1| unknown [Medicago truncatula] 220 4e-55
ref|XP_002321601.1| ribosomal protein L12 [Populus trichocarpa] ... 219 6e-55
gb|EXB87892.1| 50S ribosomal protein [Morus notabilis] 218 2e-54
ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloro... 217 4e-54
ref|XP_006596956.1| PREDICTED: uncharacterized protein LOC100306... 214 3e-53
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro... 213 4e-53
ref|XP_004246494.1| PREDICTED: 50S ribosomal protein L12-2, chlo... 213 7e-53
ref|XP_006341095.1| PREDICTED: 54S ribosomal protein L12, mitoch... 212 9e-53
ref|XP_006407989.1| hypothetical protein EUTSA_v10021590mg [Eutr... 211 2e-52
ref|XP_002884554.1| ribosomal protein L12 family protein [Arabid... 211 2e-52
gb|ABA40429.1| unknown [Solanum tuberosum] 211 2e-52
ref|NP_187255.1| ribosomal protein L12/ ATP-dependent Clp protea... 210 3e-52
ref|XP_003535140.1| PREDICTED: 54S ribosomal protein L12, mitoch... 210 3e-52
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 209 1e-51
ref|XP_006298636.1| hypothetical protein CARUB_v10014726mg [Caps... 208 1e-51
gb|ESW19427.1| hypothetical protein PHAVU_006G124100g [Phaseolus... 207 2e-51
ref|XP_004298948.1| PREDICTED: 50S ribosomal protein L7/L12-like... 207 3e-51
>gb|EMJ10833.1| hypothetical protein PRUPE_ppa011860mg [Prunus persica]
gi|462405370|gb|EMJ10834.1| hypothetical protein
PRUPE_ppa011860mg [Prunus persica]
Length = 193
Score = 229 bits (584), Expect = 7e-58
Identities = 123/193 (63%), Positives = 146/193 (75%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
MR L R+ R R T + PL RC Q D A ++K +KYKYP+ YDPYGP+P PS
Sbjct: 1 MRLVALARSFRARPTLPETTGPLQFRCFQPDFAPRDPDAKPKKYKYPAFYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEK- 256
+K+ +LA+ IAAL+P+ER Q+GP LGE+L+ PKL+PISTEGLDL AEEK
Sbjct: 61 DKIIQLAERIAALAPEERCQLGPTLGERLRLPKLQPISTEGLDLGSQGGPAGASKAEEKK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
VEKTAFDVKLEKF+ A+KIKVIKEVR FT+LGLKEAKDLVEK P +LKQGVTK+EA +II
Sbjct: 121 VEKTAFDVKLEKFDTAAKIKVIKEVRTFTSLGLKEAKDLVEKVPCVLKQGVTKEEANDII 180
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVAVME
Sbjct: 181 EKIKAAGGVAVME 193
>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
gi|223550509|gb|EEF51996.1| 50S ribosomal protein
L7/L12, putative [Ricinus communis]
Length = 193
Score = 224 bits (571), Expect = 2e-56
Identities = 123/193 (63%), Positives = 145/193 (75%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQAD-AAQNSKL--QKYKYPSVYDPYGPKPAPS 433
M+F LLR+V R T + PL VR Q D ++ K+ +KYKYP+ YDPYGP+P PS
Sbjct: 1 MKFVPLLRSVSTRYTLREITGPLQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA-EEK 256
+K+ +LA+ IAAL P+ER QIGP L KL HPKL+ ISTEG+DL EEK
Sbjct: 61 DKIVQLAERIAALPPEERRQIGPTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEKAP +LKQGVTK+EA +II
Sbjct: 121 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDII 180
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVA+ME
Sbjct: 181 EKIKAAGGVAIME 193
>gb|EOY20734.1| Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
ClpS family protein [Theobroma cacao]
Length = 196
Score = 222 bits (566), Expect = 9e-56
Identities = 115/193 (59%), Positives = 143/193 (74%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ L++ + +R + + PL R Q D N+K +++KYP YDPYGP+P PS
Sbjct: 4 MKLFGLVKVIHVRPSVREVTGPLQSRTFQHDFVPRDPNAKPKRFKYPQFYDPYGPRPLPS 63
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA-EEK 256
+K+ +LA+ IA+L P+ER QIGP L E+L+HPKL+PI TEG+DL EEK
Sbjct: 64 DKIVQLAERIASLLPEERRQIGPTLSERLRHPKLQPIETEGMDLGSQGGGAAGATKVEEK 123
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEK PVLLKQG+TK+EA +II
Sbjct: 124 KEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVLLKQGITKEEANDII 183
Query: 75 EKIKAVGGVAVME 37
EKIK+ GGVAVME
Sbjct: 184 EKIKSAGGVAVME 196
>gb|AFK35058.1| unknown [Medicago truncatula]
Length = 190
Score = 220 bits (560), Expect = 4e-55
Identities = 122/191 (63%), Positives = 139/191 (72%), Gaps = 2/191 (1%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQ--KYKYPSVYDPYGPKPAPSE 430
MR TL R +R R PL R Q D +++SK + KYK P YDPYGP+P PS+
Sbjct: 1 MRIATLSRYIR-RLPRPGTFVPLQSRAFQTDISKDSKAKPIKYKIPQSYDPYGPRPPPSD 59
Query: 429 KVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKVE 250
K+ +LA+ IAALS +ER I PAL E+LK PKL+PISTEG+DL E+K E
Sbjct: 60 KIVQLAERIAALSEEERGHIIPALSERLKLPKLQPISTEGMDLGSDSGAAGPKVEEKKAE 119
Query: 249 KTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIEK 70
KTAFDVKLEKF+ ASKIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTKDEA IIEK
Sbjct: 120 KTAFDVKLEKFDTASKIKVIKEVRAFTNLGLKEAKDLVEKVPTVLKQGVTKDEANSIIEK 179
Query: 69 IKAVGGVAVME 37
IKAVGGVAVME
Sbjct: 180 IKAVGGVAVME 190
>ref|XP_002321601.1| ribosomal protein L12 [Populus trichocarpa]
gi|222868597|gb|EEF05728.1| ribosomal protein L12
[Populus trichocarpa]
Length = 195
Score = 219 bits (559), Expect = 6e-55
Identities = 127/199 (63%), Positives = 144/199 (72%), Gaps = 10/199 (5%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPA-----APLLVRCIQADAAQN---SKLQKYKYPSVYDPYGP 448
M+F L R+V +H PA PL VR Q D +K +KYKYP YDPYGP
Sbjct: 1 MKFIALARSV----CAHHPALREITGPLQVRYFQHDFVPRDPKTKPKKYKYPLYYDPYGP 56
Query: 447 KPAPSEKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXX 268
+P PSEK+ ++A+ IAAL P+ER+QIG ALG KLKHPKL+PISTEG+ L
Sbjct: 57 RPPPSEKIIEIAERIAALPPEERSQIGSALGYKLKHPKLQPISTEGMGLGSQGGEAAAGA 116
Query: 267 A--EEKVEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKD 94
A EEK EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTKD
Sbjct: 117 AKVEEKKEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPCVLKQGVTKD 176
Query: 93 EAAEIIEKIKAVGGVAVME 37
EA IIEKIKA GGVAVME
Sbjct: 177 EANGIIEKIKAAGGVAVME 195
>gb|EXB87892.1| 50S ribosomal protein [Morus notabilis]
Length = 194
Score = 218 bits (555), Expect = 2e-54
Identities = 125/194 (64%), Positives = 143/194 (73%), Gaps = 5/194 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTS-HDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAP 436
MR L+R+ R ST PL R Q D N+K +KYKYP+ Y+PYGP+P+P
Sbjct: 1 MRIFALVRSFRGGSTLLWKVTGPLQHRSFQHDFIPRDPNAKPKKYKYPAFYNPYGPRPSP 60
Query: 435 SEKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEK 256
SEK+ +LA+ I L+P+ER QIGPAL +KL PKL+ ISTEGLDL AEEK
Sbjct: 61 SEKIIQLAEQIVELTPEERCQIGPALAQKLTLPKLQHISTEGLDLGAQAGPAGGAKAEEK 120
Query: 255 -VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEI 79
EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEK PVLLKQGVTK+EAAEI
Sbjct: 121 KAEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVLLKQGVTKEEAAEI 180
Query: 78 IEKIKAVGGVAVME 37
IEKIKA GGVA ME
Sbjct: 181 IEKIKAAGGVATME 194
>ref|XP_002282612.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
vinifera]
Length = 193
Score = 217 bits (552), Expect = 4e-54
Identities = 119/193 (61%), Positives = 141/193 (73%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+F L++ VR+ T PL R Q D N+K ++YKYP YDPYGPKP PS
Sbjct: 1 MKFTALVKTVRVHPTLPKIIGPLQSRFFQHDFVPREPNAKPKRYKYPPFYDPYGPKPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA-EEK 256
EKV LA+ IAAL+P+ER QIGP L ++L PK + ISTEG++L EEK
Sbjct: 61 EKVVGLAERIAALAPEERLQIGPMLKDRLSLPKTQVISTEGMELGSQGGAAAGAGKVEEK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
VEKTAFDVKLEKFEAA+KIKVIKEVRAFT+LGLKEAKDLVEK PV++KQG+TK+EA +II
Sbjct: 121 VEKTAFDVKLEKFEAAAKIKVIKEVRAFTSLGLKEAKDLVEKVPVVIKQGITKEEANDII 180
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVAVME
Sbjct: 181 EKIKAAGGVAVME 193
>ref|XP_006596956.1| PREDICTED: uncharacterized protein LOC100306392 isoform X1 [Glycine
max]
Length = 192
Score = 214 bits (544), Expect = 3e-53
Identities = 120/193 (62%), Positives = 138/193 (71%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAA---QNSKLQKYKYPSVYDPYGPKPAPS 433
MRF L R + R H PL R +Q D+ +K KYK P YDPYGP+P PS
Sbjct: 1 MRFMPLSRLI-FRLPRHYTHGPLQSRALQTDSVLKDPQAKPIKYKIPQFYDPYGPRPPPS 59
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEK- 256
EK+ +LA+ I ALS +ER QI P L E+LK PKL+PIST+G+D+ EEK
Sbjct: 60 EKIVQLAEQIEALSEEERGQIMPTLSERLKLPKLQPISTDGMDMGTEGGGAAGLKVEEKK 119
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEK PV+LKQGVTK+EA EII
Sbjct: 120 AEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGVTKEEANEII 179
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVAVME
Sbjct: 180 EKIKAAGGVAVME 192
>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
sativus]
Length = 193
Score = 213 bits (543), Expect = 4e-53
Identities = 117/193 (60%), Positives = 139/193 (72%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ + +++++RST VR Q D N+K +KYKYP+ YDPYGP+P PS
Sbjct: 1 MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA-EEK 256
+K+ +LA+ I AL ER QIGP LGEKL+HPKL+ IS +GLD+ EEK
Sbjct: 61 DKIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
EKTAFDVKLEKF+AASKIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTK+EA II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVAVME
Sbjct: 181 EKIKAAGGVAVME 193
>ref|XP_004246494.1| PREDICTED: 50S ribosomal protein L12-2, chloroplastic-like isoform
1 [Solanum lycopersicum]
gi|460401984|ref|XP_004246495.1| PREDICTED: 50S
ribosomal protein L12-2, chloroplastic-like isoform 2
[Solanum lycopersicum]
Length = 194
Score = 213 bits (541), Expect = 7e-53
Identities = 116/194 (59%), Positives = 140/194 (72%), Gaps = 5/194 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ LR ++ + + PL R Q D N K +YKYP+ YDPYGP+P PS
Sbjct: 1 MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNVKPIRYKYPAAYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA--EE 259
+K+ +LA+ IAAL+P+ER QIGP L E L+HP L+PIS EG+DL E+
Sbjct: 61 DKIVQLAERIAALAPEERRQIGPLLREILRHPTLKPISVEGMDLGAMGGAGGGPAKAEEK 120
Query: 258 KVEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEI 79
KVEKTAFDVKLEKF+AA+KIKVIKEVR+FT+LGLKEAKDLVEK P +LKQGVTK+EA EI
Sbjct: 121 KVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKDLVEKVPAILKQGVTKEEANEI 180
Query: 78 IEKIKAVGGVAVME 37
IEKIKAVGGVAVME
Sbjct: 181 IEKIKAVGGVAVME 194
>ref|XP_006341095.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum
tuberosum]
Length = 194
Score = 212 bits (540), Expect = 9e-53
Identities = 116/194 (59%), Positives = 141/194 (72%), Gaps = 5/194 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ LR ++ + + PL R Q D N+K +YKYP+ YDPYGP+P PS
Sbjct: 1 MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA--EE 259
+K+ +LA+ IAAL+P+ER QIGP L E L+HP L+ IS EG+DL E+
Sbjct: 61 DKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAMGGAGGGPAKAEEK 120
Query: 258 KVEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEI 79
KVEKTAFDVKLEKF+AASKIKVIKEVR+FT+LGLKEAK+LVEKAP +LKQGVTK+EA EI
Sbjct: 121 KVEKTAFDVKLEKFDAASKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEI 180
Query: 78 IEKIKAVGGVAVME 37
IEKIKAVGGVAVME
Sbjct: 181 IEKIKAVGGVAVME 194
>ref|XP_006407989.1| hypothetical protein EUTSA_v10021590mg [Eutrema salsugineum]
gi|567202521|ref|XP_006407990.1| hypothetical protein
EUTSA_v10021590mg [Eutrema salsugineum]
gi|567202525|ref|XP_006407991.1| hypothetical protein
EUTSA_v10021590mg [Eutrema salsugineum]
gi|557109135|gb|ESQ49442.1| hypothetical protein
EUTSA_v10021590mg [Eutrema salsugineum]
gi|557109136|gb|ESQ49443.1| hypothetical protein
EUTSA_v10021590mg [Eutrema salsugineum]
gi|557109137|gb|ESQ49444.1| hypothetical protein
EUTSA_v10021590mg [Eutrema salsugineum]
Length = 188
Score = 211 bits (538), Expect = 2e-52
Identities = 115/189 (60%), Positives = 139/189 (73%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQKYKYPSVYDPYGPKPAPSEKV 424
M+ +L+R V + VR +Q D+ +K +KYKYPSVYDPYGP+P PS K+
Sbjct: 1 MKLISLVRKVHSLQCQPKVNWSVQVRFLQQDSVSKAKPKKYKYPSVYDPYGPRPQPSNKI 60
Query: 423 AKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKVEKT 244
+LA+ IAALSP+ER QIGPAL E L PK + ISTEG+ + EEK EKT
Sbjct: 61 VELAERIAALSPEERKQIGPALNEHLSLPKQQMISTEGMSIGAKQDAGTGKA-EEKKEKT 119
Query: 243 AFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIEKIK 64
AFDVKLEKF+A++KIKVIKEVRAFT+LGLKEAK+LVEK PV+LKQG+TK+EA EII KIK
Sbjct: 120 AFDVKLEKFDASAKIKVIKEVRAFTSLGLKEAKELVEKVPVVLKQGLTKEEANEIITKIK 179
Query: 63 AVGGVAVME 37
AVGGVAVME
Sbjct: 180 AVGGVAVME 188
>ref|XP_002884554.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297330394|gb|EFH60813.1| ribosomal protein
L12 family protein [Arabidopsis lyrata subsp. lyrata]
Length = 186
Score = 211 bits (538), Expect = 2e-52
Identities = 114/189 (60%), Positives = 138/189 (73%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQKYKYPSVYDPYGPKPAPSEKV 424
M+ +L+R VR R + + VR +Q D+ +K +KYKYPSVYDPYGP+P PS K+
Sbjct: 1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVSKAKPKKYKYPSVYDPYGPRPQPSNKI 60
Query: 423 AKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKVEKT 244
+LA+ IAALSP+ER QIGPAL E L+ PK + IS++G+ EEK EKT
Sbjct: 61 MELAECIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAGKV---EEKKEKT 117
Query: 243 AFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIEKIK 64
AFDVKLEKF A+ KIKVIKEVR FT+LGLKEAK+LVEK P +LKQGVTK+EA EII KIK
Sbjct: 118 AFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIAKIK 177
Query: 63 AVGGVAVME 37
AVGGVAVME
Sbjct: 178 AVGGVAVME 186
>gb|ABA40429.1| unknown [Solanum tuberosum]
Length = 194
Score = 211 bits (537), Expect = 2e-52
Identities = 115/194 (59%), Positives = 141/194 (72%), Gaps = 5/194 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ LR ++ + + PL R Q D N+K +YKYP+ YDPYGP+P PS
Sbjct: 1 MKLIARLRPIQTCTALREIIGPLQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA--EE 259
+K+ +LA+ IAAL+P+ER QIGP L E L+HP L+ IS EG+DL E+
Sbjct: 61 DKIVQLAERIAALAPEERRQIGPLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEK 120
Query: 258 KVEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEI 79
KVEKTAFDVKLEKF+AA+KIKVIKEVR+FT+LGLKEAK+LVEKAP +LKQGVTK+EA EI
Sbjct: 121 KVEKTAFDVKLEKFDAAAKIKVIKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEI 180
Query: 78 IEKIKAVGGVAVME 37
IEKIKAVGGVAVME
Sbjct: 181 IEKIKAVGGVAVME 194
>ref|NP_187255.1| ribosomal protein L12/ ATP-dependent Clp protease adaptor protein
[Arabidopsis thaliana] gi|42572277|ref|NP_974234.1|
ribosomal protein L12/ ATP-dependent Clp protease
adaptor protein [Arabidopsis thaliana]
gi|145331982|ref|NP_001078113.1| ribosomal protein L12/
ATP-dependent Clp protease adaptor protein [Arabidopsis
thaliana] gi|7658342|gb|AAF66132.1| hypothetical
protein; 10657-10097 [Arabidopsis thaliana]
gi|17381070|gb|AAL36347.1| unknown protein [Arabidopsis
thaliana] gi|20465711|gb|AAM20324.1| unknown protein
[Arabidopsis thaliana] gi|332640813|gb|AEE74334.1|
ribosomal protein L12/ ATP-dependent Clp protease
adaptor protein [Arabidopsis thaliana]
gi|332640814|gb|AEE74335.1| ribosomal protein L12/
ATP-dependent Clp protease adaptor protein [Arabidopsis
thaliana] gi|332640815|gb|AEE74336.1| ribosomal protein
L12/ ATP-dependent Clp protease adaptor protein
[Arabidopsis thaliana]
Length = 186
Score = 210 bits (535), Expect = 3e-52
Identities = 113/189 (59%), Positives = 138/189 (73%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQKYKYPSVYDPYGPKPAPSEKV 424
M+ +L+R VR R + + VR +Q D+ +K +KYKYPSVYDPYGP+P PS K+
Sbjct: 1 MKLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVSKAKPKKYKYPSVYDPYGPRPQPSSKI 60
Query: 423 AKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKVEKT 244
+LA+ IAALSP+ER QIGPAL E L+ PK + IS++G+ EEK EKT
Sbjct: 61 MELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAGNV---EEKKEKT 117
Query: 243 AFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIEKIK 64
AFDVKLEKF A+ KIKVIKEVR FT+LGLKEAK+LVEK P +LKQGVTK+EA EII KIK
Sbjct: 118 AFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIAKIK 177
Query: 63 AVGGVAVME 37
AVGG+AVME
Sbjct: 178 AVGGIAVME 186
>ref|XP_003535140.1| PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Glycine
max]
Length = 191
Score = 210 bits (535), Expect = 3e-52
Identities = 115/192 (59%), Positives = 137/192 (71%), Gaps = 3/192 (1%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQN---SKLQKYKYPSVYDPYGPKPAPS 433
MRF L R + H PL R +Q+D+ +K KY+ P YDPYGP+P PS
Sbjct: 1 MRFMPLSRLICRLPRPHT-RGPLQSRALQSDSVPKDPQAKPIKYRIPQFYDPYGPRPPPS 59
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKV 253
EK+ +LA+ I ALS +ER QI P L E+LK PKL+PIST+G+ + E+K
Sbjct: 60 EKIVQLAERIGALSEEERGQIMPTLSERLKLPKLQPISTDGMGMGTEGGTAGPKVEEKKA 119
Query: 252 EKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIE 73
EKTAFDVKLEKF+AA+KIKVIKEVRAFTNLGLKEAKDLVEK PV+LKQG+TK+EA EIIE
Sbjct: 120 EKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPVVLKQGITKEEANEIIE 179
Query: 72 KIKAVGGVAVME 37
KIKA GGVAVME
Sbjct: 180 KIKAAGGVAVME 191
>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
chloroplastic-like [Cucumis sativus]
Length = 193
Score = 209 bits (531), Expect = 1e-51
Identities = 115/193 (59%), Positives = 137/193 (70%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQ---NSKLQKYKYPSVYDPYGPKPAPS 433
M+ + +++++RST VR Q D N+K +KYKYP+ YDPYGP+P PS
Sbjct: 1 MKLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXA-EEK 256
+K+ +LA+ I AL ER QIGP L KL+HPKL+ IS +GLD+ EEK
Sbjct: 61 DKIIELAERIVALPAAERCQIGPTLXRKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
EKTAFDVKLEKF+AASKIKVIKEVRAFTNLGLKEAKDLVEK P +LKQGVTK+EA II
Sbjct: 121 KEKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGII 180
Query: 75 EKIKAVGGVAVME 37
EKIKA GGVAVME
Sbjct: 181 EKIKAAGGVAVME 193
>ref|XP_006298636.1| hypothetical protein CARUB_v10014726mg [Capsella rubella]
gi|482567345|gb|EOA31534.1| hypothetical protein
CARUB_v10014726mg [Capsella rubella]
Length = 188
Score = 208 bits (530), Expect = 1e-51
Identities = 114/189 (60%), Positives = 135/189 (71%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQKYKYPSVYDPYGPKPAPSEKV 424
M+ +L+R R R + VR +Q D+ +K +KYKYPSVYDPYGP+P PS K+
Sbjct: 1 MKLISLVRNFRSRQCQPKATWSVQVRFLQQDSVSKTKPKKYKYPSVYDPYGPRPQPSNKI 60
Query: 423 AKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKVEKT 244
+LA+ IAALSP+ER QIGPAL E L+ PK + IS+EGL L EEK EKT
Sbjct: 61 VELAERIAALSPEERQQIGPALNEHLRLPKQQMISSEGLSLGAKQDAGAGKA-EEKKEKT 119
Query: 243 AFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIEKIK 64
FDVKLEKF A+ KIKVIKEVR FT+LGLKEAK+LVEK P +LK GVTK+EA EII KIK
Sbjct: 120 TFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAVLKLGVTKEEANEIIAKIK 179
Query: 63 AVGGVAVME 37
AVGGVAVME
Sbjct: 180 AVGGVAVME 188
>gb|ESW19427.1| hypothetical protein PHAVU_006G124100g [Phaseolus vulgaris]
Length = 191
Score = 207 bits (528), Expect = 2e-51
Identities = 113/192 (58%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQNSKLQK---YKYPSVYDPYGPKPAPS 433
MRF + R + R D PL R +Q ++ L K YK P YDPYGP+P PS
Sbjct: 1 MRFTPISRLI-CRLPQRDICGPLQSRALQTNSVPKDPLAKPIKYKIPQFYDPYGPRPPPS 59
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEKV 253
EK+ +LA+ I LS +ER QI P L E+L PKL+PIST+GLD+ E+K
Sbjct: 60 EKIIQLAERIGELSEEERGQIMPTLSERLNLPKLQPISTDGLDMGPEGGAAGPKVEEKKA 119
Query: 252 EKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEIIE 73
EKTAFDVKLEKF+AA+KIKVIKEVR FT+LGLKEAKDLVEK PV+LKQGVTK+EA +IIE
Sbjct: 120 EKTAFDVKLEKFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPVVLKQGVTKEEANDIIE 179
Query: 72 KIKAVGGVAVME 37
KIKA GGVAVME
Sbjct: 180 KIKAAGGVAVME 191
>ref|XP_004298948.1| PREDICTED: 50S ribosomal protein L7/L12-like [Fragaria vesca subsp.
vesca]
Length = 193
Score = 207 bits (527), Expect = 3e-51
Identities = 115/193 (59%), Positives = 141/193 (73%), Gaps = 4/193 (2%)
Frame = -2
Query: 603 MRFHTLLRAVRIRSTSHDPAAPLLVRCIQADAAQN---SKLQKYKYPSVYDPYGPKPAPS 433
MR + R R T L VR Q D +K +YKYP VY+PYGP+P PS
Sbjct: 1 MRIVAVARLFHARPTLPKATGHLQVRAFQPDFKPRDPKAKPIRYKYPEVYNPYGPRPPPS 60
Query: 432 EKVAKLADIIAALSPDERAQIGPALGEKLKHPKLEPISTEGLDLXXXXXXXXXXXAEEK- 256
+K+ +LA+ IAAL+P ER+Q+GPAL E+LK P+++ ISTEG+DL AEEK
Sbjct: 61 DKIVQLAERIAALAPAERSQLGPALVERLKLPQMQHISTEGMDLGAQGGAAGASKAEEKK 120
Query: 255 VEKTAFDVKLEKFEAASKIKVIKEVRAFTNLGLKEAKDLVEKAPVLLKQGVTKDEAAEII 76
VEKTAFDVKLEKFEA++KIKVIKEVRAFT+LGLKEAKDLVEKAP +LKQG+TK+EA ++I
Sbjct: 121 VEKTAFDVKLEKFEASAKIKVIKEVRAFTSLGLKEAKDLVEKAPCVLKQGLTKEEANDMI 180
Query: 75 EKIKAVGGVAVME 37
EK+KA GGVAVME
Sbjct: 181 EKLKAAGGVAVME 193