BLASTX nr result
ID: Rheum21_contig00003021
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00003021
(1054 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 243 1e-61
gb|EXC32481.1| Protein BEARSKIN1 [Morus notabilis] 241 3e-61
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 238 2e-60
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 238 3e-60
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258... 237 5e-60
ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protei... 236 1e-59
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 235 2e-59
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 231 3e-58
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 229 1e-57
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 229 1e-57
gb|AFK37234.1| unknown [Lotus japonicus] 229 1e-57
pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I) gi... 229 1e-57
ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutr... 228 3e-57
ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutr... 228 3e-57
gb|ADL36848.1| WHY domain class transcription factor [Malus dome... 228 4e-57
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 225 2e-56
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 225 3e-56
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 225 3e-56
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 225 3e-56
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 225 3e-56
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 243 bits (619), Expect = 1e-61
Identities = 125/208 (60%), Positives = 159/208 (76%), Gaps = 4/208 (1%)
Frame = +1
Query: 103 RSKTSQRLLPG---KDTSCFNAFVSRAGFSTVAPNAGQNVGPND-KIYASYYIYKGKAAL 270
R++ + LPG K + +A + AGFSTV N + G + +++A Y ++KGKAAL
Sbjct: 11 RNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAAL 70
Query: 271 SVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLG 450
S P P RLDSGG K++R+GV+MLTF PSVGERKYDW+K+QLFALS TE GS+IS+G
Sbjct: 71 SAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMG 130
Query: 451 HNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPA 630
+S EFFHDPSM SSNAGQVRKSLSIKP+ GSG F SL+VVNN L+TN+RFTVPVT A
Sbjct: 131 TRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTA 190
Query: 631 EFAVIRTSFSYALPHIMGWDLYSTQQTK 714
EFAV+RT+FS+ALPHIMGWD ++ + ++
Sbjct: 191 EFAVMRTAFSFALPHIMGWDRFTNRPSE 218
>gb|EXC32481.1| Protein BEARSKIN1 [Morus notabilis]
Length = 734
Score = 241 bits (616), Expect = 3e-61
Identities = 124/201 (61%), Positives = 147/201 (73%), Gaps = 5/201 (2%)
Frame = +1
Query: 103 RSKTSQRLLPGKDTSC-----FNAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAA 267
++++S+ LL GKD + ++F SRAG ST P GQ +G I A Y +YKGKAA
Sbjct: 401 KNQSSKNLLYGKDVNLSDGLPLHSFTSRAGISTAGP--GQTLGVKGSIAAPYTVYKGKAA 458
Query: 268 LSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISL 447
LSV PV P +LDSG VDR GVMML F P++GERKYDW+KKQLFAL+ TE GS+IS+
Sbjct: 459 LSVTPVLPTFTKLDSGLRVVDRHGVMMLKFIPAIGERKYDWEKKQLFALNATEVGSLISM 518
Query: 448 GHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTP 627
G N+SCEFFHDPSM SSNAGQVRKSLSIKP G G SL VVNNIL+T + F VP T
Sbjct: 519 GSNDSCEFFHDPSMLSSNAGQVRKSLSIKPHATGGGYMISLTVVNNILKTRDNFAVPFTT 578
Query: 628 AEFAVIRTSFSYALPHIMGWD 690
AEFAV++T SYALPHI+GWD
Sbjct: 579 AEFAVVKTVCSYALPHILGWD 599
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 238 bits (608), Expect = 2e-60
Identities = 123/208 (59%), Positives = 157/208 (75%), Gaps = 4/208 (1%)
Frame = +1
Query: 103 RSKTSQRLLPGKDTSCF---NAFVSRAGFSTVAPNAGQNVGPND-KIYASYYIYKGKAAL 270
R++ + L G+D NA + A FSTV + + G + +++A Y ++KGKAAL
Sbjct: 11 RNQLLHKKLSGEDVKGSIWQNAINTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAAL 70
Query: 271 SVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLG 450
S P P RLDSGG K++R+GV+MLTF PSVGERKYDW+K+QLFALS TE GS+IS+G
Sbjct: 71 SAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMG 130
Query: 451 HNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPA 630
+S EFFHDPSM SSNAGQVRKSLSIKP+ GSG F SL+VVNN L+TN+RFTVPVT A
Sbjct: 131 TRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTA 190
Query: 631 EFAVIRTSFSYALPHIMGWDLYSTQQTK 714
EFAV+RT+FS+ALPHIMGWD ++ + ++
Sbjct: 191 EFAVMRTAFSFALPHIMGWDRFTNRPSE 218
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 238 bits (607), Expect = 3e-60
Identities = 122/208 (58%), Positives = 156/208 (75%), Gaps = 3/208 (1%)
Frame = +1
Query: 100 LRSKTSQRLLPGKDTSCF---NAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAAL 270
+R++ + L G+D NA + A FSTV + + +++A Y ++KGKAAL
Sbjct: 8 IRNQLLHKKLSGEDVKGSIWQNAINTFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAAL 67
Query: 271 SVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLG 450
S P P RLDSGG K++R+GV+MLTF PSVGERKYDW+K+QLFALS TE GS+IS+G
Sbjct: 68 SAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMG 127
Query: 451 HNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPA 630
+S EFFHDPSM SSNAGQVRKSLSIKP+ GSG F SL+VVNN L+TN+RFTVPVT A
Sbjct: 128 TRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTA 187
Query: 631 EFAVIRTSFSYALPHIMGWDLYSTQQTK 714
EFAV+RT+FS+ALPHIMGWD ++ + ++
Sbjct: 188 EFAVMRTAFSFALPHIMGWDRFTNRPSE 215
>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
gi|297734756|emb|CBI16990.3| unnamed protein product
[Vitis vinifera]
Length = 231
Score = 237 bits (605), Expect = 5e-60
Identities = 122/211 (57%), Positives = 150/211 (71%), Gaps = 5/211 (2%)
Frame = +1
Query: 103 RSKTSQRLLPGK-----DTSCFNAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAA 267
R+ S+ LL GK + S +AF SR ST + D++YA Y +YKGKA+
Sbjct: 11 RTHLSENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYAPYCVYKGKAS 70
Query: 268 LSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISL 447
L+V PV P+ RLDSGG KVDR GVMML F+P+VGERKYDW+KKQ FALS E GS++SL
Sbjct: 71 LTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALSAVEVGSLLSL 130
Query: 448 GHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTP 627
CEFFHDPSMK+SNAGQVRKSLS+K GGS F SL+VVNNI +TNER VP+T
Sbjct: 131 SPGGGCEFFHDPSMKTSNAGQVRKSLSVKSMDGGS-YFLSLSVVNNIQKTNERLAVPLTA 189
Query: 628 AEFAVIRTSFSYALPHIMGWDLYSTQQTKRS 720
AEFAV++T+ S+ALPHI+GWD Y Q+ R+
Sbjct: 190 AEFAVMQTACSFALPHILGWDRYMNQKLPRT 220
>ref|XP_006478304.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform X1 [Citrus sinensis]
Length = 240
Score = 236 bits (602), Expect = 1e-59
Identities = 125/238 (52%), Positives = 164/238 (68%), Gaps = 5/238 (2%)
Frame = +1
Query: 103 RSKTSQRLLPG-----KDTSCFNAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAA 267
RS+ S++LL G +D + +S+AG ST + +I+A YY+YKGKAA
Sbjct: 12 RSQLSEKLLAGEANYVRDGLKSHVLISQAGMSTTGHDVSAKGSLGGRIFAPYYVYKGKAA 71
Query: 268 LSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISL 447
SV+PV P ++LDSG KV R+GV++LTF P++GERKYDW KKQ FALSPTE GS++++
Sbjct: 72 FSVDPVLPTFMKLDSGDLKVKRKGVILLTFAPAIGERKYDWAKKQHFALSPTEVGSLLTM 131
Query: 448 GHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTP 627
G +S EFFHDP+M SSNAGQ+RKSLSIK + G F SLNV NNIL+TNERF VPVT
Sbjct: 132 GPRDSSEFFHDPAMLSSNAGQMRKSLSIKAN--ADGFFISLNVANNILKTNERFVVPVTT 189
Query: 628 AEFAVIRTSFSYALPHIMGWDLYSTQQTKRSTDGVYKDSKFGKTTTDAFKTLDLEWGR 801
AEFAV++T+ S+ALPH+MGWD + Q + STD SK + + L+LEW +
Sbjct: 190 AEFAVMKTACSFALPHLMGWDRLTNQLPRSSTDS-SSSSKVDQ------QFLNLEWDK 240
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 235 bits (600), Expect = 2e-59
Identities = 121/208 (58%), Positives = 156/208 (75%), Gaps = 4/208 (1%)
Frame = +1
Query: 103 RSKTSQRLLPG---KDTSCFNAFVSRAGFSTVAPNAGQNVGPND-KIYASYYIYKGKAAL 270
R++ + LPG K + +A + AGFSTV N + G + +++A Y ++KGKAAL
Sbjct: 11 RNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAAL 70
Query: 271 SVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLG 450
S P P RLDSGG K++R+GV+MLTF PSVGERKYDW+K+Q+ L TE GS+IS+G
Sbjct: 71 SAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQVMCLYATEVGSLISMG 130
Query: 451 HNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPA 630
+S EFFHDPSM SSNAGQVRKSLSIKP+ GSG F SL+VVNN L+TN+RFTVPVT A
Sbjct: 131 TRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTA 190
Query: 631 EFAVIRTSFSYALPHIMGWDLYSTQQTK 714
EFAV+RT+FS+ALPHIMGWD ++ + ++
Sbjct: 191 EFAVMRTAFSFALPHIMGWDRFTNRPSE 218
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 231 bits (590), Expect = 3e-58
Identities = 114/170 (67%), Positives = 140/170 (82%)
Frame = +1
Query: 196 NAGQNVGPNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGE 375
+AG+ G +++A Y ++KGKAALS P P RLDSGG K++R+GV+MLTF PSVGE
Sbjct: 3 DAGKREG---RVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGE 59
Query: 376 RKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSG 555
RKYDW+K+QLFALS TE GS+IS+G +S EFFHDPSM SSNAGQVRKSLSIKP+ GSG
Sbjct: 60 RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSG 119
Query: 556 LFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWDLYSTQ 705
F SL+VVNN L+TN+RFTVPVT AEFAV+RT+FS+ALPHIMGWD ++ +
Sbjct: 120 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 229 bits (585), Expect = 1e-57
Identities = 117/231 (50%), Positives = 157/231 (67%), Gaps = 4/231 (1%)
Frame = +1
Query: 121 RLLPGKDTSCFNAFVSRAGFSTVAPNAG----QNVGPNDKIYASYYIYKGKAALSVNPVS 288
R L + S F+ + GF++ + +G + P+ +++A Y I+KGKAALSV PV
Sbjct: 11 RSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEAAKPSGRVFAPYAIFKGKAALSVEPVL 70
Query: 289 PRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCE 468
P +DSG ++DR+G +M+TF P+ GERKYDW+KKQ FALSPTE GS+IS+G +S E
Sbjct: 71 PTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISMGSKDSSE 130
Query: 469 FFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIR 648
FFHDPSMKSSNAGQVRKSLSIKP GSG F SL V+N+IL+TN+R VPVT AEF V++
Sbjct: 131 FFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIVVPVTTAEFTVMK 190
Query: 649 TSFSYALPHIMGWDLYSTQQTKRSTDGVYKDSKFGKTTTDAFKTLDLEWGR 801
T+FS+ LPH+MGWD + T + G + + G T + L+ EW +
Sbjct: 191 TAFSFVLPHLMGWD----RLTDQDGTGTQRTTSHGNTDP---QQLEQEWDK 234
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 229 bits (584), Expect = 1e-57
Identities = 117/232 (50%), Positives = 157/232 (67%), Gaps = 5/232 (2%)
Frame = +1
Query: 121 RLLPGKDTSCFNAFVSRAGFSTVAPNAG-----QNVGPNDKIYASYYIYKGKAALSVNPV 285
R L + S F+ + GF++ + +G + P+ +++A Y I+KGKAALSV PV
Sbjct: 11 RSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEEAAKPSGRVFAPYAIFKGKAALSVEPV 70
Query: 286 SPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESC 465
P +DSG ++DR+G +M+TF P+ GERKYDW+KKQ FALSPTE GS+IS+G +S
Sbjct: 71 LPTFTEIDSGNLRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISMGSKDSS 130
Query: 466 EFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVI 645
EFFHDPSMKSSNAGQVRKSLSIKP GSG F SL V+N+IL+TN+R VPVT AEF V+
Sbjct: 131 EFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIVVPVTTAEFTVM 190
Query: 646 RTSFSYALPHIMGWDLYSTQQTKRSTDGVYKDSKFGKTTTDAFKTLDLEWGR 801
+T+FS+ LPH+MGWD + T + G + + G T + L+ EW +
Sbjct: 191 KTAFSFVLPHLMGWD----RLTDQDGTGTQRTTSHGNTDP---QQLEQEWDK 235
>gb|AFK37234.1| unknown [Lotus japonicus]
Length = 235
Score = 229 bits (584), Expect = 1e-57
Identities = 116/209 (55%), Positives = 144/209 (68%), Gaps = 1/209 (0%)
Frame = +1
Query: 178 FSTVAPNAGQNVG-PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLT 354
FST A G D+++A YY+YKGKAA+S++PV P +LDSG V+R+G +M+
Sbjct: 33 FSTAARETYVAKGYTTDRVFAPYYVYKGKAAMSLSPVLPTFTKLDSGALVVERRGSIMMV 92
Query: 355 FTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIK 534
FTP++GERKYDW+K+Q FALS TE GS+I++G +SCEFFHDPSM SSNAGQVRKSLSIK
Sbjct: 93 FTPAIGERKYDWEKRQKFALSATEVGSLIAMGPQDSCEFFHDPSMSSSNAGQVRKSLSIK 152
Query: 535 PSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWDLYSTQQTK 714
P SG F SL VVNN+L E F VPVT AEFAV++T+ S+ALPHIMGWD + QQ+
Sbjct: 153 PHANSSGYFVSLTVVNNLLNAKENFNVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSS 212
Query: 715 RSTDGVYKDSKFGKTTTDAFKTLDLEWGR 801
V SK K DLEW +
Sbjct: 213 LPGGTVGLQSKVDK------PVFDLEWDK 235
>pdb|3R9Y|A Chain A, Crystal Structure Of Stwhy2 K67a (Form I)
gi|347948613|pdb|3R9Z|A Chain A, Crystal Structure Of
Stwhy2 K67a (Form Ii) gi|347948614|pdb|3RA0|A Chain A,
Crystal Structure Of A Stwhy2 K67a-Dt32 Complex
Length = 178
Score = 229 bits (584), Expect = 1e-57
Identities = 113/170 (66%), Positives = 139/170 (81%)
Frame = +1
Query: 196 NAGQNVGPNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGE 375
+AG+ G +++A Y ++KG AALS P P RLDSGG K++R+GV+MLTF PSVGE
Sbjct: 3 DAGKREG---RVFAPYSVFKGAAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGE 59
Query: 376 RKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSG 555
RKYDW+K+QLFALS TE GS+IS+G +S EFFHDPSM SSNAGQVRKSLSIKP+ GSG
Sbjct: 60 RKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSG 119
Query: 556 LFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWDLYSTQ 705
F SL+VVNN L+TN+RFTVPVT AEFAV+RT+FS+ALPHIMGWD ++ +
Sbjct: 120 YFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNR 169
>ref|XP_006390788.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087222|gb|ESQ28074.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 241
Score = 228 bits (581), Expect = 3e-57
Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 2/184 (1%)
Frame = +1
Query: 145 SCFNAFVSRAGFSTVAPN-AGQNVG-PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGG 318
S F +RA ST A +G++ P+ +++A Y I+KGKAALSV PV P R++ G
Sbjct: 29 SPLRGFATRADSSTSARGFSGKDAAKPSGRVFAPYAIFKGKAALSVEPVLPTFARIEPGN 88
Query: 319 FKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKSS 498
++DR+G +M+TF P+ GERKYDW+KKQLFALS TE GS+IS+G N+S EFFHDPSMKSS
Sbjct: 89 LRIDRRGSVMMTFMPASGERKYDWEKKQLFALSATEVGSLISMGSNDSSEFFHDPSMKSS 148
Query: 499 NAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPHI 678
NAGQVRKSLSIKP GSG F SL V N+IL+TNER VPVT AEF V++T+FS+ALPHI
Sbjct: 149 NAGQVRKSLSIKPHADGSGYFISLTVNNSILKTNERIVVPVTTAEFVVMKTAFSFALPHI 208
Query: 679 MGWD 690
MGWD
Sbjct: 209 MGWD 212
>ref|XP_006390787.1| hypothetical protein EUTSA_v10019058mg [Eutrema salsugineum]
gi|557087221|gb|ESQ28073.1| hypothetical protein
EUTSA_v10019058mg [Eutrema salsugineum]
Length = 240
Score = 228 bits (581), Expect = 3e-57
Identities = 114/184 (61%), Positives = 141/184 (76%), Gaps = 2/184 (1%)
Frame = +1
Query: 145 SCFNAFVSRAGFSTVAPN-AGQNVG-PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGG 318
S F +RA ST A +G++ P+ +++A Y I+KGKAALSV PV P R++ G
Sbjct: 28 SPLRGFATRADSSTSARGFSGKDAAKPSGRVFAPYAIFKGKAALSVEPVLPTFARIEPGN 87
Query: 319 FKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKSS 498
++DR+G +M+TF P+ GERKYDW+KKQLFALS TE GS+IS+G N+S EFFHDPSMKSS
Sbjct: 88 LRIDRRGSVMMTFMPASGERKYDWEKKQLFALSATEVGSLISMGSNDSSEFFHDPSMKSS 147
Query: 499 NAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPHI 678
NAGQVRKSLSIKP GSG F SL V N+IL+TNER VPVT AEF V++T+FS+ALPHI
Sbjct: 148 NAGQVRKSLSIKPHADGSGYFISLTVNNSILKTNERIVVPVTTAEFVVMKTAFSFALPHI 207
Query: 679 MGWD 690
MGWD
Sbjct: 208 MGWD 211
>gb|ADL36848.1| WHY domain class transcription factor [Malus domestica]
Length = 237
Score = 228 bits (580), Expect = 4e-57
Identities = 111/185 (60%), Positives = 138/185 (74%)
Frame = +1
Query: 136 KDTSCFNAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAALSVNPVSPRLVRLDSG 315
+D S A+ FST + ++YAS+ I+KGKAALS+ PV P +L+SG
Sbjct: 22 RDASSMYAYTHITRFSTATQKFSVKGPSSHQVYASFDIFKGKAALSLTPVLPTFTKLESG 81
Query: 316 GFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKS 495
VDR+G +ML FTP++GERKYDW+K+Q+FALS TE G++ISLG N+SCE FHDPSMKS
Sbjct: 82 SLVVDRRGSVMLKFTPAIGERKYDWEKRQMFALSATEVGALISLGSNDSCELFHDPSMKS 141
Query: 496 SNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPH 675
SNAGQVRKSLSIKP GSG F SL VVNN+L+T E F+VPV AEFAV++T+ S+ALPH
Sbjct: 142 SNAGQVRKSLSIKPHADGSGYFVSLTVVNNLLKTRESFSVPVMTAEFAVMKTACSFALPH 201
Query: 676 IMGWD 690
IMGWD
Sbjct: 202 IMGWD 206
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 225 bits (574), Expect = 2e-56
Identities = 106/163 (65%), Positives = 132/163 (80%)
Frame = +1
Query: 217 PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDK 396
P+ +++A Y I+KGKAALSV PV P +DSG ++DR+G +M+TF P++GERKYDW+K
Sbjct: 54 PSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEK 113
Query: 397 KQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNV 576
KQ FALSPTE GS+IS+G +S EFFHDPSMKSSNAGQVRKSLSIKP GSG F SL+V
Sbjct: 114 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSV 173
Query: 577 VNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWDLYSTQ 705
N IL+TN+ F VPVT AEFAV++T+FS+ALPHIMGW+ + Q
Sbjct: 174 NNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQ 216
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 225 bits (573), Expect = 3e-56
Identities = 104/158 (65%), Positives = 131/158 (82%)
Frame = +1
Query: 217 PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDK 396
P+ +++A Y I+KGKAALSV PV P +DSG ++DR+G +M+TF P++GERKYDW+K
Sbjct: 7 PSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEK 66
Query: 397 KQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNV 576
KQ FALSPTE GS+IS+G +S EFFHDPSMKSSNAGQVRKSLS+KP GSG F SL+V
Sbjct: 67 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 126
Query: 577 VNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWD 690
N+IL+TN+ F VPVT AEFAV++T+FS+ALPHIMGW+
Sbjct: 127 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWN 164
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 225 bits (573), Expect = 3e-56
Identities = 104/158 (65%), Positives = 131/158 (82%)
Frame = +1
Query: 217 PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDK 396
P+ +++A Y I+KGKAALSV PV P +DSG ++DR+G +M+TF P++GERKYDW+K
Sbjct: 49 PSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEK 108
Query: 397 KQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNV 576
KQ FALSPTE GS+IS+G +S EFFHDPSMKSSNAGQVRKSLS+KP GSG F SL+V
Sbjct: 109 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 168
Query: 577 VNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWD 690
N+IL+TN+ F VPVT AEFAV++T+FS+ALPHIMGW+
Sbjct: 169 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWN 206
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 225 bits (573), Expect = 3e-56
Identities = 113/189 (59%), Positives = 141/189 (74%)
Frame = +1
Query: 136 KDTSCFNAFVSRAGFSTVAPNAGQNVGPNDKIYASYYIYKGKAALSVNPVSPRLVRLDSG 315
+D S +A +A ST ++ Q D+++A Y ++KGKAALSV PV P + SG
Sbjct: 22 RDGSALHALTFQASISTGGKSSIQ-----DRVFAPYSVFKGKAALSVEPVLPTFSKFGSG 76
Query: 316 GFKVDRQGVMMLTFTPSVGERKYDWDKKQLFALSPTEAGSIISLGHNESCEFFHDPSMKS 495
+VDR+G MMLTF P++GERKYD++K+Q FALS TE GS+IS G +SCEFFHDPSM S
Sbjct: 77 NLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCEFFHDPSMLS 136
Query: 496 SNAGQVRKSLSIKPSPGGSGLFFSLNVVNNILQTNERFTVPVTPAEFAVIRTSFSYALPH 675
SNAGQVRK+LSIKP GSG F SL+VVNNIL+T ERFTVPVT AEF V++T+ S+ALPH
Sbjct: 137 SNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLKTACSFALPH 196
Query: 676 IMGWDLYST 702
IMGWD +T
Sbjct: 197 IMGWDRLTT 205
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 225 bits (573), Expect = 3e-56
Identities = 104/158 (65%), Positives = 131/158 (82%)
Frame = +1
Query: 217 PNDKIYASYYIYKGKAALSVNPVSPRLVRLDSGGFKVDRQGVMMLTFTPSVGERKYDWDK 396
P+ +++A Y I+KGKAALSV PV P +DSG ++DR+G +M+TF P++GERKYDW+K
Sbjct: 50 PSGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEK 109
Query: 397 KQLFALSPTEAGSIISLGHNESCEFFHDPSMKSSNAGQVRKSLSIKPSPGGSGLFFSLNV 576
KQ FALSPTE GS+IS+G +S EFFHDPSMKSSNAGQVRKSLS+KP GSG F SL+V
Sbjct: 110 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 169
Query: 577 VNNILQTNERFTVPVTPAEFAVIRTSFSYALPHIMGWD 690
N+IL+TN+ F VPVT AEFAV++T+FS+ALPHIMGW+
Sbjct: 170 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWN 207