BLASTX nr result

ID: Rheum21_contig00003006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00003006
         (680 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ03960.1| hypothetical protein PRUPE_ppa013424mg [Prunus pe...   151   2e-34
ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago ...   150   5e-34
ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleo...   149   8e-34
ref|XP_006430167.1| hypothetical protein CICLE_v10013235mg [Citr...   147   3e-33
ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleo...   147   3e-33
gb|AFK34381.1| unknown [Lotus japonicus]                              147   4e-33
gb|ESW34913.1| hypothetical protein PHAVU_001G191400g [Phaseolus...   146   5e-33
ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleo...   146   7e-33
gb|ADB02890.1| putative small nuclear ribonucleoprotein polypept...   146   7e-33
ref|XP_004239727.1| PREDICTED: probable small nuclear ribonucleo...   145   9e-33
gb|ABK21578.1| unknown [Picea sitchensis] gi|116780948|gb|ABK218...   145   9e-33
ref|XP_004494202.1| PREDICTED: probable small nuclear ribonucleo...   145   1e-32
gb|EPS62313.1| hypothetical protein M569_12478 [Genlisea aurea]       145   1e-32
ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative ...   144   2e-32
ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   144   2e-32
ref|XP_006404885.1| hypothetical protein EUTSA_v10000406mg [Eutr...   144   2e-32
ref|XP_002308466.2| hypothetical protein POPTR_0006s22770g [Popu...   144   2e-32
gb|EOY08287.1| Small nuclear ribonucleoprotein G, putative isofo...   144   2e-32
ref|XP_004249956.1| PREDICTED: probable small nuclear ribonucleo...   144   2e-32
gb|AFK45258.1| unknown [Medicago truncatula]                          144   2e-32

>gb|EMJ03960.1| hypothetical protein PRUPE_ppa013424mg [Prunus persica]
          Length = 123

 Score =  151 bits (381), Expect = 2e-34
 Identities = 73/82 (89%), Positives = 79/82 (96%)
 Frame = +1

Query: 142 FFTMSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEI 321
           FFTMSRSGQPPDLKKYMDK LQIKLNANR V+GTLRGFDQFMNLV+DNTVEVNGNE+N+I
Sbjct: 40  FFTMSRSGQPPDLKKYMDKKLQIKLNANRMVIGTLRGFDQFMNLVVDNTVEVNGNEKNDI 99

Query: 322 GMVVIRGNSVVTVEALEPVNRS 387
           GMVVIRGNSVVTVEALEPV ++
Sbjct: 100 GMVVIRGNSVVTVEALEPVAKN 121


>ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
           gi|87240819|gb|ABD32677.1| Like-Sm
           ribonucleoprotein-related, core [Medicago truncatula]
           gi|355500861|gb|AES82064.1| hypothetical protein
           MTR_7g104930 [Medicago truncatula]
          Length = 80

 Score =  150 bits (378), Expect = 5e-34
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR +VGTLRGFDQFMNLV+DNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVNRS
Sbjct: 61  VIRGNSVVTVEALEPVNRS 79


>ref|XP_003521472.1| PREDICTED: probable small nuclear ribonucleoprotein G isoform X1
           [Glycine max] gi|356572580|ref|XP_003554446.1|
           PREDICTED: probable small nuclear ribonucleoprotein
           G-like [Glycine max] gi|255625815|gb|ACU13252.1| unknown
           [Glycine max]
          Length = 79

 Score =  149 bits (376), Expect = 8e-34
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRT 79


>ref|XP_006430167.1| hypothetical protein CICLE_v10013235mg [Citrus clementina]
           gi|568856354|ref|XP_006481749.1| PREDICTED: probable
           small nuclear ribonucleoprotein G-like [Citrus sinensis]
           gi|557532224|gb|ESR43407.1| hypothetical protein
           CICLE_v10013235mg [Citrus clementina]
          Length = 80

 Score =  147 bits (371), Expect = 3e-33
 Identities = 72/79 (91%), Positives = 77/79 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR +VGTLRGFDQFMNLVIDNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVIDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPV++S
Sbjct: 61  VIRGNSVVTVEALEPVSKS 79


>ref|XP_003537685.1| PREDICTED: probable small nuclear ribonucleoprotein G [Glycine max]
           gi|255630063|gb|ACU15385.1| unknown [Glycine max]
          Length = 79

 Score =  147 bits (371), Expect = 3e-33
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLN NR +VGTLRGFDQFMNLV+DNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNGNRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRA 79


>gb|AFK34381.1| unknown [Lotus japonicus]
          Length = 80

 Score =  147 bits (370), Expect = 4e-33
 Identities = 70/79 (88%), Positives = 77/79 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDKNLQIKLNANR +VGTLRG+DQFMN+V+DNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPV R+
Sbjct: 61  VIRGNSVVTVEALEPVTRT 79


>gb|ESW34913.1| hypothetical protein PHAVU_001G191400g [Phaseolus vulgaris]
          Length = 79

 Score =  146 bits (369), Expect = 5e-33
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR +VGTLRGFDQFMNLV+DNTVEVNGNE+ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRT 79


>ref|XP_004143329.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus] gi|449482341|ref|XP_004156252.1| PREDICTED:
           probable small nuclear ribonucleoprotein G-like [Cucumis
           sativus]
          Length = 80

 Score =  146 bits (368), Expect = 7e-33
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR V+GTLRGFDQFMNLV+DNTVEVNGNE+ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRLVIGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVTVEALEPVNR
Sbjct: 61  VIRGNSVVTVEALEPVNR 78


>gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
           [Jatropha curcas]
          Length = 80

 Score =  146 bits (368), Expect = 7e-33
 Identities = 71/79 (89%), Positives = 77/79 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+E+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVN++
Sbjct: 61  VIRGNSVVTVEALEPVNKT 79


>ref|XP_004239727.1| PREDICTED: probable small nuclear ribonucleoprotein G-like isoform
           1 [Solanum lycopersicum]
           gi|565358104|ref|XP_006345869.1| PREDICTED: probable
           small nuclear ribonucleoprotein G-like [Solanum
           tuberosum]
          Length = 80

 Score =  145 bits (367), Expect = 9e-33
 Identities = 72/78 (92%), Positives = 75/78 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLVIDNTVEVNGN++NEIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRQVVGTLRGFDQFMNLVIDNTVEVNGNDKNEIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVT+EALEPV R
Sbjct: 61  VIRGNSVVTIEALEPVAR 78


>gb|ABK21578.1| unknown [Picea sitchensis] gi|116780948|gb|ABK21894.1| unknown
           [Picea sitchensis]
          Length = 80

 Score =  145 bits (367), Expect = 9e-33
 Identities = 72/79 (91%), Positives = 74/79 (93%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK L IKLNANR VVGTLRGFDQFMNLV+D TVEVNGNERNEIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLNIKLNANRVVVGTLRGFDQFMNLVLDGTVEVNGNERNEIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVV +EALEPVNRS
Sbjct: 61  VIRGNSVVMIEALEPVNRS 79


>ref|XP_004494202.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Cicer
           arietinum]
          Length = 80

 Score =  145 bits (366), Expect = 1e-32
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR +VGTLRGFDQFMNLV+DNTVEVNGN++ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPVNR+
Sbjct: 61  VIRGNSVVTVEALEPVNRT 79


>gb|EPS62313.1| hypothetical protein M569_12478 [Genlisea aurea]
          Length = 80

 Score =  145 bits (365), Expect = 1e-32
 Identities = 72/79 (91%), Positives = 75/79 (94%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANRTVVGTLRGFDQFMNLVIDNTVE NGNE+ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEANGNEKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNSVVTVEALEPV R+
Sbjct: 61  VIRGNSVVTVEALEPVARA 79


>ref|XP_002530332.1| small nuclear ribonucleoprotein G, putative [Ricinus communis]
           gi|223530136|gb|EEF32048.1| small nuclear
           ribonucleoprotein G, putative [Ricinus communis]
          Length = 80

 Score =  144 bits (364), Expect = 2e-32
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+E+ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVTVEALEPVNR
Sbjct: 61  VIRGNSVVTVEALEPVNR 78


>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  144 bits (364), Expect = 2e-32
 Identities = 71/78 (91%), Positives = 75/78 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNGNE+ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVTVEALEPV+R
Sbjct: 61  VIRGNSVVTVEALEPVSR 78


>ref|XP_006404885.1| hypothetical protein EUTSA_v10000406mg [Eutrema salsugineum]
           gi|557106013|gb|ESQ46338.1| hypothetical protein
           EUTSA_v10000406mg [Eutrema salsugineum]
          Length = 80

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNGN++ +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNDKTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNRS 387
           VIRGNS+VTVEALEPV RS
Sbjct: 61  VIRGNSIVTVEALEPVGRS 79


>ref|XP_002308466.2| hypothetical protein POPTR_0006s22770g [Populus trichocarpa]
           gi|550336886|gb|EEE91989.2| hypothetical protein
           POPTR_0006s22770g [Populus trichocarpa]
          Length = 129

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+E+ +IGMV
Sbjct: 50  MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 109

Query: 331 VIRGNSVVTVEALEPVNRS 387
           V+RGNSVVTVEALEPVNR+
Sbjct: 110 VLRGNSVVTVEALEPVNRA 128


>gb|EOY08287.1| Small nuclear ribonucleoprotein G, putative isoform 1 [Theobroma
           cacao]
          Length = 80

 Score =  144 bits (363), Expect = 2e-32
 Identities = 71/78 (91%), Positives = 74/78 (94%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNGNER +IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNERTDIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVTVEALEPV +
Sbjct: 61  VIRGNSVVTVEALEPVGK 78


>ref|XP_004249956.1| PREDICTED: probable small nuclear ribonucleoprotein G-like [Solanum
           lycopersicum]
          Length = 81

 Score =  144 bits (363), Expect = 2e-32
 Identities = 71/78 (91%), Positives = 74/78 (94%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR V GTLRGFDQFMNLVIDNTVEVNGN++NEIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRLVTGTLRGFDQFMNLVIDNTVEVNGNDKNEIGMV 60

Query: 331 VIRGNSVVTVEALEPVNR 384
           VIRGNSVVT+EALEPV R
Sbjct: 61  VIRGNSVVTIEALEPVAR 78


>gb|AFK45258.1| unknown [Medicago truncatula]
          Length = 81

 Score =  144 bits (363), Expect = 2e-32
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +1

Query: 151 MSRSGQPPDLKKYMDKNLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGNERNEIGMV 330
           MSRSGQPPDLKKYMDK LQIKLNANR +VGTLRGFDQFMNLV+DNTVEVNGNE+N+IGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 331 VIRGNSVVTVEALEPV 378
           VIRGNSVVTVEALEPV
Sbjct: 61  VIRGNSVVTVEALEPV 76


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