BLASTX nr result
ID: Rheum21_contig00002784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00002784
(1739 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93918.1| Pentatricopeptide repeat-containing protein, puta... 671 0.0
ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containi... 660 0.0
ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutr... 657 0.0
ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, part... 657 0.0
ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citr... 655 0.0
ref|NP_199684.2| pentatricopeptide repeat-containing protein [Ar... 652 0.0
ref|XP_002529915.1| pentatricopeptide repeat-containing protein,... 648 0.0
ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containi... 646 0.0
ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containi... 646 0.0
ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containi... 644 0.0
gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis] 642 0.0
ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containi... 638 e-180
ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containi... 638 e-180
ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containi... 634 e-179
ref|XP_002303044.1| pentatricopeptide repeat-containing family p... 631 e-178
ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containi... 629 e-177
dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana] 622 e-175
gb|ESW12606.1| hypothetical protein PHAVU_008G126700g [Phaseolus... 622 e-175
ref|XP_002863920.1| pentatricopeptide repeat-containing protein ... 619 e-174
ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group] g... 586 e-165
>gb|EOX93918.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 515
Score = 671 bits (1730), Expect = 0.0
Identities = 327/419 (78%), Positives = 380/419 (90%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIAS+KAIS++LRREATKA+IEKK+G NSKKLLPRT+LEALH+RITALRWESALKV
Sbjct: 82 VNRKIASRKAISVVLRREATKALIEKKRGPNNSKKLLPRTVLEALHDRITALRWESALKV 141
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWYRPN+ IY+KL+VMLGKCKQPEKA +LFQ MI EGC VN E YTALLSAY
Sbjct: 142 FELLREQLWYRPNSAIYVKLIVMLGKCKQPEKAHDLFQAMIDEGCIVNHEAYTALLSAYG 201
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ LFD+AFSLLE MK + + PDV TYSIL+KSCL V AFDKV+ LLSDM+SQG+RPNT
Sbjct: 202 RSALFDKAFSLLEEMKDTPNCHPDVQTYSILIKSCLQVLAFDKVQALLSDMASQGIRPNT 261
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
VTYNTLIDAYGKA F EME TL EML++ DC PDVWTMN T+RA+GSSGQIE MEKCYE
Sbjct: 262 VTYNTLIDAYGKAKMFQEMEMTLVEMLREKDCGPDVWTMNSTIRAFGSSGQIETMEKCYE 321
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ +GI+P+IKTFNILLDSYGK+ NY+KMSAV++YMQ+YHYSWT+VTYNVVIDAFGRAG
Sbjct: 322 KFQRAGIQPNIKTFNILLDSYGKTGNYDKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 381
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLM+SERIKP+CVT CSLVRAYG+AG + KIAGVLRFI+NSDVTLD+VFFN
Sbjct: 382 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAGKAEKIAGVLRFIENSDVTLDTVFFN 441
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGRM F+EM+GVLEMM+++G +PD VTYRTM+KAYSI+RMT+HVKE+R+++ S
Sbjct: 442 CLVDAYGRMGCFSEMKGVLEMMKQKGYKPDKVTYRTMIKAYSISRMTSHVKELRDLLES 500
>ref|XP_002269420.2| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Vitis vinifera]
gi|297744374|emb|CBI37344.3| unnamed protein product
[Vitis vinifera]
Length = 497
Score = 660 bits (1704), Expect = 0.0
Identities = 324/414 (78%), Positives = 374/414 (90%), Gaps = 1/414 (0%)
Frame = +1
Query: 304 KIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKVFDL 480
KIAS+KAIS+ILRREATKAVIEKK+G NSKKLLPRT+LEALHERITALRWESALKVF+L
Sbjct: 68 KIASKKAISVILRREATKAVIEKKRGPNNSKKLLPRTVLEALHERITALRWESALKVFEL 127
Query: 481 LREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRTC 660
LREQLWYRPN+GIYIKL+VMLGKCKQPEKA LF MI EGC VN E YTALLSAYSR+
Sbjct: 128 LREQLWYRPNSGIYIKLIVMLGKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSG 187
Query: 661 LFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVTY 840
LFD+AFSLLE MK++ D +PDVHTYS+L+KSCL V AFDKV +LLSDM++QG++PNTVTY
Sbjct: 188 LFDKAFSLLEKMKNTPDCQPDVHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTY 247
Query: 841 NTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKFQ 1020
NTLIDAYGKA +FAEME+TL EML++ C+PDVWTMN TLRA+GSSGQIE MEKCYEKFQ
Sbjct: 248 NTLIDAYGKAKRFAEMESTLLEMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQ 307
Query: 1021 DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDLK 1200
+GIEP+IKTFNILLDSYGK+E YEKMSAV++YMQ+YH+SWT+VTYNVVIDAFGRAGDLK
Sbjct: 308 SAGIEPNIKTFNILLDSYGKAEKYEKMSAVMEYMQKYHFSWTIVTYNVVIDAFGRAGDLK 367
Query: 1201 QMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCLV 1380
QME+LFRLM+SERIKP+CVT CSLVRAYGRAG + KI GVLRFI+NSDV LD VFFNCLV
Sbjct: 368 QMEYLFRLMRSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDVMLDIVFFNCLV 427
Query: 1381 DAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREII 1542
DAYGR+ FAEM+GVLEMM+K+GC+PD +TYRTM+KAY I MT+ KE++ ++
Sbjct: 428 DAYGRLGCFAEMKGVLEMMKKKGCKPDKITYRTMIKAYKIGGMTSCAKELQGLM 481
Score = 60.8 bits (146), Expect = 2e-06
Identities = 46/196 (23%), Positives = 90/196 (45%), Gaps = 5/196 (2%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQ---DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTL 1149
G+ + EK + F D G + + + LL +Y +S ++K ++++ M+
Sbjct: 149 GKCKQPEKAHALFLAMIDEGCVVNHEAYTALLSAYSRSGLFDKAFSLLEKMKNTPDCQPD 208
Query: 1150 V-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAG-VL 1323
V TY+V+I + + ++ L M ++ IKPN VT+ +L+ AYG+A +++ +L
Sbjct: 209 VHTYSVLIKSCLQVVAFDKVPVLLSDMANQGIKPNTVTYNTLIDAYGKAKRFAEMESTLL 268
Query: 1324 RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIA 1503
+ D N + A+G Q M E + G EP++ T+ ++ +Y A
Sbjct: 269 EMLREGKCEPDVWTMNSTLRAFGSSGQIETMEKCYEKFQSAGIEPNIKTFNILLDSYGKA 328
Query: 1504 RMTNHVKEVREIITSF 1551
+ V E + +
Sbjct: 329 EKYEKMSAVMEYMQKY 344
>ref|XP_006395140.1| hypothetical protein EUTSA_v10004021mg [Eutrema salsugineum]
gi|557091779|gb|ESQ32426.1| hypothetical protein
EUTSA_v10004021mg [Eutrema salsugineum]
Length = 513
Score = 657 bits (1696), Expect = 0.0
Identities = 319/419 (76%), Positives = 375/419 (89%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
+N KIAS+KAISIILRREATKA+IEKK G TNSKKLLPRT+LE+LHERITALRWESAL+V
Sbjct: 82 MNTKIASRKAISIILRREATKAIIEKKNGPTNSKKLLPRTVLESLHERITALRWESALQV 141
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWY+PN GIY+KL++MLGKCKQPEKA ELF+ MI EGC VN EVYTAL+SAYS
Sbjct: 142 FELLREQLWYKPNVGIYVKLIIMLGKCKQPEKAHELFEAMISEGCVVNHEVYTALVSAYS 201
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ FD+AF+LLE MKSS + +PDVHTYSIL+KS L VFAFDKV+ LLSDM QG+RPNT
Sbjct: 202 RSGRFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNT 261
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
+TYNTLIDAYGKA F EME+TL +ML + DCKPD WTMN TLRA+G +GQIEMME CY+
Sbjct: 262 ITYNTLIDAYGKAKMFVEMESTLIQMLGEEDCKPDSWTMNSTLRAFGGTGQIEMMENCYD 321
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ SGIEP+I+TFNILLDSYGK+ NY+KMSAV+++MQ+YHYSWT++TYNVVIDAFGRAG
Sbjct: 322 KFQSSGIEPNIRTFNILLDSYGKTGNYKKMSAVMEFMQKYHYSWTIITYNVVIDAFGRAG 381
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLMQSERIKP+CVT CSLVRAYGRAG + KI GVLRFI+NSD+ LD VFFN
Sbjct: 382 DLKQMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKAEKIGGVLRFIENSDIRLDLVFFN 441
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGRM++FAEM+GVLE+MEK+G +PD +TYRTM+KAY I+ MT+HVKE+ ++ S
Sbjct: 442 CLVDAYGRMEKFAEMKGVLEIMEKKGFKPDKITYRTMVKAYRISGMTSHVKELHGMVES 500
Score = 65.1 bits (157), Expect = 9e-08
Identities = 45/210 (21%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Frame = +1
Query: 928 KPDVWTMNCTLRAYGSSGQIEMMEKCYEKFQDSGIEPSIKTFNILLDSYGKSENYEKMSA 1107
KP+V + G Q E + +E G + + + L+ +Y +S ++
Sbjct: 152 KPNVGIYVKLIIMLGKCKQPEKAHELFEAMISEGCVVNHEVYTALVSAYSRSGRFDDAFT 211
Query: 1108 VIQYMQRYHYSWTLV-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAY 1284
+++ M+ H V TY+++I +F + +++ L M+ + I+PN +T+ +L+ AY
Sbjct: 212 LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAY 271
Query: 1285 GRAGNSSKIAGVL-RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPD 1461
G+A ++ L + + D DS N + A+G Q M + + G EP+
Sbjct: 272 GKAKMFVEMESTLIQMLGEEDCKPDSWTMNSTLRAFGGTGQIEMMENCYDKFQSSGIEPN 331
Query: 1462 LVTYRTMMKAYSIARMTNHVKEVREIITSF 1551
+ T+ ++ +Y + V E + +
Sbjct: 332 IRTFNILLDSYGKTGNYKKMSAVMEFMQKY 361
>ref|XP_006280306.1| hypothetical protein CARUB_v10026229mg, partial [Capsella rubella]
gi|482549010|gb|EOA13204.1| hypothetical protein
CARUB_v10026229mg, partial [Capsella rubella]
Length = 521
Score = 657 bits (1696), Expect = 0.0
Identities = 323/417 (77%), Positives = 372/417 (89%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEKKKGTNSKKLLPRTILEALHERITALRWESALKVFD 477
N KIAS+KAISIILRREATKA+IEKKKG SKKLLPRT+LE+LHERITALRWESAL+VF+
Sbjct: 94 NTKIASRKAISIILRREATKAIIEKKKG--SKKLLPRTVLESLHERITALRWESALQVFE 151
Query: 478 LLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRT 657
LLREQLWY+PN GIY+KL+VMLGKCKQPEKA ELFQ MI+EGC VN EVYTALLSAYSR+
Sbjct: 152 LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQAMINEGCVVNHEVYTALLSAYSRS 211
Query: 658 CLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVT 837
FD+AF+LLE MKSS + +PDVHTYSIL+KS L VFAFDKV+ LLSDM QG+RPNT+T
Sbjct: 212 GRFDDAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT 271
Query: 838 YNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKF 1017
YNTLIDAYGKA F EME+TL +ML + DCKPD WTMN TLRA+G +GQIEMME CYEKF
Sbjct: 272 YNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 331
Query: 1018 QDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDL 1197
Q SGIEP+I+TFNILLDSYGKS NY+KMSAV++YMQ+Y +SWT+VTYNVVIDAFGRAGDL
Sbjct: 332 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYQFSWTIVTYNVVIDAFGRAGDL 391
Query: 1198 KQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCL 1377
KQME+LFRLMQSERIKP+CVT CSLVRAYGRAG + K+ GVLRFI+NSD+ LD VFFNCL
Sbjct: 392 KQMEYLFRLMQSERIKPSCVTLCSLVRAYGRAGKADKLGGVLRFIENSDIRLDLVFFNCL 451
Query: 1378 VDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
VDAYGRM++FAEM+GVLE+MEK+G +PD VTYRTM+KAY I+ MT HVKE+ ++ S
Sbjct: 452 VDAYGRMEKFAEMKGVLELMEKKGFKPDKVTYRTMVKAYRISGMTTHVKELHGVVDS 508
Score = 68.6 bits (166), Expect = 8e-09
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQ---DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTL 1149
G+ + EK +E FQ + G + + + LL +Y +S ++ +++ M+ H
Sbjct: 174 GKCKQPEKAHELFQAMINEGCVVNHEVYTALLSAYSRSGRFDDAFTLLERMKSSHNCQPD 233
Query: 1150 V-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVL- 1323
V TY+++I +F + +++ L M+ + I+PN +T+ +L+ AYG+A ++ L
Sbjct: 234 VHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLI 293
Query: 1324 RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIA 1503
+ + D DS N + A+G Q M E + G EP++ T+ ++ +Y +
Sbjct: 294 QMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKS 353
Query: 1504 RMTNHVKEVREIITSFR 1554
+ V E + ++
Sbjct: 354 GNYKKMSAVMEYMQKYQ 370
>ref|XP_006443594.1| hypothetical protein CICLE_v10019744mg [Citrus clementina]
gi|567902214|ref|XP_006443595.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
gi|568851175|ref|XP_006479269.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568851177|ref|XP_006479270.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|557545856|gb|ESR56834.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
gi|557545857|gb|ESR56835.1| hypothetical protein
CICLE_v10019744mg [Citrus clementina]
Length = 517
Score = 655 bits (1689), Expect = 0.0
Identities = 315/417 (75%), Positives = 373/417 (89%), Gaps = 1/417 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIAS+KAIS+ILRREATKAVIEKK+G NSKKLLPRT+LEAL+ERITALRWESALKV
Sbjct: 87 VNRKIASKKAISVILRREATKAVIEKKRGPVNSKKLLPRTVLEALNERITALRWESALKV 146
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWY+PN +Y+KL+VMLGKCKQPEKA ELFQ M+ EGCD N + +TALLSAY
Sbjct: 147 FELLREQLWYKPNAAVYVKLIVMLGKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYG 206
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ LFD+AFSLLEHMK++ D +PDV+TYSIL+KSCL FAFDKV+ LLSDMS+QG+RPNT
Sbjct: 207 RSGLFDKAFSLLEHMKNTPDCQPDVNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNT 266
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
VTYNTLIDAYG+A FAEME TL +ML + DC+PDVWTMNCTLRA+G+SGQI+ MEKCYE
Sbjct: 267 VTYNTLIDAYGRAKMFAEMELTLVKMLSE-DCEPDVWTMNCTLRAFGNSGQIDTMEKCYE 325
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ +GI+PSI TFNILLDSYGK+ ++EKMSAV++YMQ+YHYSWT+VTYN+VIDAFGRAG
Sbjct: 326 KFQSAGIQPSINTFNILLDSYGKAGHFEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 385
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLM+SERIKP+CVT CSLVRAYG AG K+ VLRFIDNSD+ LD+VFFN
Sbjct: 386 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGHAGKPEKLGSVLRFIDNSDIMLDTVFFN 445
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREII 1542
CLVDAYGR+ FAEM+GVLE+M++RGC+PD VTYRTM++AYS M NH KE ++++
Sbjct: 446 CLVDAYGRLKCFAEMKGVLEVMQQRGCKPDKVTYRTMVRAYSTNGMKNHAKEFQDLV 502
Score = 79.0 bits (193), Expect = 6e-12
Identities = 51/195 (26%), Positives = 99/195 (50%), Gaps = 4/195 (2%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQ---DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTL 1149
G+ + EK +E FQ D G + + ++F LL +YG+S ++K +++++M+
Sbjct: 171 GKCKQPEKAHELFQAMVDEGCDANTQSFTALLSAYGRSGLFDKAFSLLEHMKNTPDCQPD 230
Query: 1150 V-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLR 1326
V TY+++I + +A +++ L M ++ I+PN VT+ +L+ AYGRA +++ L
Sbjct: 231 VNTYSILIKSCLKAFAFDKVQALLSDMSTQGIRPNTVTYNTLIDAYGRAKMFAEMELTLV 290
Query: 1327 FIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIAR 1506
+ + D D NC + A+G Q M E + G +P + T+ ++ +Y A
Sbjct: 291 KMLSEDCEPDVWTMNCTLRAFGNSGQIDTMEKCYEKFQSAGIQPSINTFNILLDSYGKAG 350
Query: 1507 MTNHVKEVREIITSF 1551
+ V E + +
Sbjct: 351 HFEKMSAVMEYMQKY 365
>ref|NP_199684.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635750|sp|Q9FKC3.2|PP424_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g48730, chloroplastic; Flags: Precursor
gi|332008334|gb|AED95717.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 652 bits (1683), Expect = 0.0
Identities = 320/417 (76%), Positives = 370/417 (88%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEKKKGTNSKKLLPRTILEALHERITALRWESALKVFD 477
N KIAS+KAISIILRREATK++IEKKKG SKKLLPRT+LE+LHERITALRWESA++VF+
Sbjct: 81 NTKIASRKAISIILRREATKSIIEKKKG--SKKLLPRTVLESLHERITALRWESAIQVFE 138
Query: 478 LLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRT 657
LLREQLWY+PN GIY+KL+VMLGKCKQPEKA ELFQ MI+EGC VN EVYTAL+SAYSR+
Sbjct: 139 LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRS 198
Query: 658 CLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVT 837
FD AF+LLE MKSS + +PDVHTYSIL+KS L VFAFDKV+ LLSDM QG+RPNT+T
Sbjct: 199 GRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT 258
Query: 838 YNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKF 1017
YNTLIDAYGKA F EME+TL +ML + DCKPD WTMN TLRA+G +GQIEMME CYEKF
Sbjct: 259 YNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 318
Query: 1018 QDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDL 1197
Q SGIEP+I+TFNILLDSYGKS NY+KMSAV++YMQ+YHYSWT+VTYNVVIDAFGRAGDL
Sbjct: 319 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 378
Query: 1198 KQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCL 1377
KQME+LFRLMQSERI P+CVT CSLVRAYGRA + KI GVLRFI+NSD+ LD VFFNCL
Sbjct: 379 KQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 438
Query: 1378 VDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
VDAYGRM++FAEM+GVLE+MEK+G +PD +TYRTM+KAY I+ MT HVKE+ ++ S
Sbjct: 439 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVES 495
Score = 68.2 bits (165), Expect = 1e-08
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 21/250 (8%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQD---SGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTL 1149
G+ + EK +E FQ+ G + + + L+ +Y +S ++ +++ M+ H
Sbjct: 161 GKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPD 220
Query: 1150 V-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVL- 1323
V TY+++I +F + +++ L M+ + I+PN +T+ +L+ AYG+A ++ L
Sbjct: 221 VHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLI 280
Query: 1324 RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIA 1503
+ + D DS N + A+G Q M E + G EP++ T+ ++ +Y +
Sbjct: 281 QMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKS 340
Query: 1504 RMTNHVKEVRE----------------IITSFRRRD*YHKEEVLLAIILSFAVYSAFVAC 1635
+ V E +I +F R + E L ++ S + F +C
Sbjct: 341 GNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERI---FPSC 397
Query: 1636 VLV*PLVNLY 1665
V + LV Y
Sbjct: 398 VTLCSLVRAY 407
>ref|XP_002529915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530592|gb|EEF32469.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 636
Score = 648 bits (1671), Expect = 0.0
Identities = 315/416 (75%), Positives = 369/416 (88%), Gaps = 1/416 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
++RKIAS+KAIS+ILRREATKA+IEKK+G TNSKKLLPRT+LEALHERITALRWESALKV
Sbjct: 82 MDRKIASRKAISVILRREATKAIIEKKRGPTNSKKLLPRTVLEALHERITALRWESALKV 141
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQ+WYRP +G+YIKL+VMLGKCKQPEKA ELFQ MIHEGCDV+ E YTALLSAY
Sbjct: 142 FELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYG 201
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ L D+AFSLLE MK + D +PDVHTYSIL+KSC+ VFAFDK K LLS+M S G+ PNT
Sbjct: 202 RSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNT 261
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
+TYNTLIDAYGKA F EMEATL +ML Q +C+PDVWTMN TLRA+G SGQIE MEKCYE
Sbjct: 262 ITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYE 321
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ +GIEPSI TFN+LLDSYGK+ +Y+KMSAV++YMQ+YHYSWT++TYN+VIDAFGRAG
Sbjct: 322 KFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVIDAFGRAG 381
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLM+SERIKP+CVT CSLVRAYG+A KI GVLRFI+NSD+TLD+VFFN
Sbjct: 382 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFIENSDITLDTVFFN 441
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREI 1539
CLVDAYGRM FAEM+GVL +ME++G PD +TYRTM+KAYS MT HVKE++++
Sbjct: 442 CLVDAYGRMGCFAEMKGVLILMEQKGYRPDKITYRTMIKAYSSKGMTKHVKELQDL 497
Score = 122 bits (307), Expect = 4e-25
Identities = 71/294 (24%), Positives = 145/294 (49%), Gaps = 1/294 (0%)
Frame = +1
Query: 664 FDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVTYN 843
++ A + E ++ ++P Y L+ +K L M +G + +Y
Sbjct: 135 WESALKVFELLREQIWYRPYSGMYIKLIVMLGKCKQPEKAHELFQAMIHEGCDVSHESYT 194
Query: 844 TLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKFQD 1023
L+ AYG++ + + L EM + DC+PDV T + +++ + + +
Sbjct: 195 ALLSAYGRSGLLDKAFSLLEEMKRNPDCQPDVHTYSILIKSCVQVFAFDKAKTLLSNMES 254
Query: 1024 SGIEPSIKTFNILLDSYGKSENYEKMSA-VIQYMQRYHYSWTLVTYNVVIDAFGRAGDLK 1200
GI P+ T+N L+D+YGK++ +E+M A +++ + + + + T N + AFG +G ++
Sbjct: 255 LGISPNTITYNTLIDAYGKAKMFEEMEATLVKMLSQQNCEPDVWTMNSTLRAFGISGQIE 314
Query: 1201 QMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCLV 1380
ME + Q I+P+ +TF L+ +YG+AG+ K++ V+ ++ + + +N ++
Sbjct: 315 TMEKCYEKFQGAGIEPSIMTFNVLLDSYGKAGDYKKMSAVMEYMQKYHYSWTIITYNIVI 374
Query: 1381 DAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREII 1542
DA+GR +M + +M +P VT ++++AY A ++ V I
Sbjct: 375 DAFGRAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYGQAEKPEKIEGVLRFI 428
Score = 66.2 bits (160), Expect = 4e-08
Identities = 48/196 (24%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQ---DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTL 1149
G+ + EK +E FQ G + S +++ LL +YG+S +K ++++ M+R
Sbjct: 166 GKCKQPEKAHELFQAMIHEGCDVSHESYTALLSAYGRSGLLDKAFSLLEEMKRNPDCQPD 225
Query: 1150 V-TYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKI-AGVL 1323
V TY+++I + + + + L M+S I PN +T+ +L+ AYG+A ++ A ++
Sbjct: 226 VHTYSILIKSCVQVFAFDKAKTLLSNMESLGISPNTITYNTLIDAYGKAKMFEEMEATLV 285
Query: 1324 RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIA 1503
+ + + D N + A+G Q M E + G EP ++T+ ++ +Y A
Sbjct: 286 KMLSQQNCEPDVWTMNSTLRAFGISGQIETMEKCYEKFQGAGIEPSIMTFNVLLDSYGKA 345
Query: 1504 RMTNHVKEVREIITSF 1551
+ V E + +
Sbjct: 346 GDYKKMSAVMEYMQKY 361
>ref|XP_004299861.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 503
Score = 646 bits (1667), Expect = 0.0
Identities = 310/417 (74%), Positives = 366/417 (87%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEKKKGTNSKKLLPRTILEALHERITALRWESALKVFD 477
N+KIAS+KAIS++L REATK+ IEKKKG SK+LLPRT+LEALHERITALRWESALKVF
Sbjct: 74 NKKIASRKAISVVLMREATKSHIEKKKG--SKRLLPRTVLEALHERITALRWESALKVFQ 131
Query: 478 LLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRT 657
LL+EQLWYRPN G+YIKL+VMLGKCKQPEKA ELFQ MI EGC V+ E YTAL+SAY R+
Sbjct: 132 LLQEQLWYRPNPGVYIKLIVMLGKCKQPEKAEELFQAMIDEGCGVSHESYTALISAYGRS 191
Query: 658 CLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVT 837
+FD+AFSLLE MK + D +PDVHTYSIL+KSCLHVFA+D+V+ LLSDM +Q +RPNT+T
Sbjct: 192 SIFDKAFSLLEQMKDTPDCQPDVHTYSILIKSCLHVFAYDRVQALLSDMETQHIRPNTIT 251
Query: 838 YNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKF 1017
YNTLIDAYGK+ +FAEME+TL ML Q DC+PDVWTMN +RA+GSSGQIE MEKC+E+F
Sbjct: 252 YNTLIDAYGKSKRFAEMESTLVAMLSQRDCEPDVWTMNSVVRAFGSSGQIETMEKCFERF 311
Query: 1018 QDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDL 1197
+GI+P+I TFNILLDSYGKS NY+KMSAV++YMQ+YHYSWT+VTYNVVIDAFGRAGDL
Sbjct: 312 HSAGIQPNIMTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 371
Query: 1198 KQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCL 1377
QME+LFRLMQSERIKP+CVT CSLVRAYG+AG KI GVL F++NSDV LD+VFFNCL
Sbjct: 372 TQMEYLFRLMQSERIKPSCVTLCSLVRAYGKAGKPEKIGGVLCFVENSDVKLDAVFFNCL 431
Query: 1378 VDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
VDAYGR+ F EM+GVLEMME++GC PD +TYRTM+KAYS +MT HVKE+ E++ S
Sbjct: 432 VDAYGRLGCFTEMKGVLEMMEQKGCSPDKITYRTMIKAYSFNKMTGHVKELHELLQS 488
>ref|XP_004228653.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Solanum lycopersicum]
Length = 488
Score = 646 bits (1667), Expect = 0.0
Identities = 315/421 (74%), Positives = 365/421 (86%), Gaps = 1/421 (0%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIE-KKKGTNSKKLLPRTILEALHERITALRWESALKVF 474
N+KIASQKA+SIILRREA KAVIE KKK NSKKLLPRT+LEALHERITALRWESALKVF
Sbjct: 66 NKKIASQKAVSIILRREAAKAVIEYKKKKGNSKKLLPRTVLEALHERITALRWESALKVF 125
Query: 475 DLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSR 654
+LL+EQLWYRPN GIYIKL+VMLGKCK+PEKA LF+ M+ EGC VN E YTALLSAYSR
Sbjct: 126 ELLQEQLWYRPNPGIYIKLIVMLGKCKEPEKAQSLFEMMVEEGCVVNQEAYTALLSAYSR 185
Query: 655 TCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTV 834
+ F EAFS+LE MK+ + PDV TYSIL+KSCL V+ FDKV++LLSDM G++ NTV
Sbjct: 186 SGRFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECLGIKANTV 245
Query: 835 TYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEK 1014
TYNTLID+YGKA +F EME+TL EML++ DCKPDVWTMN TLRA+G SGQIEMMEKCYEK
Sbjct: 246 TYNTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEK 305
Query: 1015 FQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGD 1194
FQ +GIEPSIKTFNILLDSYGK+ENYEKM AV+++MQ+YH+SWT+VTYN+VIDAFGRAGD
Sbjct: 306 FQSAGIEPSIKTFNILLDSYGKTENYEKMGAVMEFMQKYHFSWTIVTYNIVIDAFGRAGD 365
Query: 1195 LKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNC 1374
LKQMEFLFRLMQSERIKPNCVT CSLVRAYG+AG + K+ VLRFI+NSDV LD+VFFNC
Sbjct: 366 LKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNC 425
Query: 1375 LVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITSFR 1554
LVDAYG M F E++GVLEMME+ GC+PD +TYR+M+KAYS+ MTN E+R I+ S
Sbjct: 426 LVDAYGMMGCFTELKGVLEMMEQSGCKPDKITYRSMIKAYSVNGMTNKASELRNILASLE 485
Query: 1555 R 1557
+
Sbjct: 486 K 486
>ref|XP_006354206.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Solanum tuberosum]
Length = 488
Score = 644 bits (1662), Expect = 0.0
Identities = 314/421 (74%), Positives = 365/421 (86%), Gaps = 1/421 (0%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIE-KKKGTNSKKLLPRTILEALHERITALRWESALKVF 474
N+KIASQKA+SIILRREA KAVIE KKK NSKKLLPRT+LEALHERITALRWESALKVF
Sbjct: 66 NKKIASQKAVSIILRREAAKAVIEYKKKKGNSKKLLPRTVLEALHERITALRWESALKVF 125
Query: 475 DLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSR 654
+LL+EQLWYRPN GIYIKL+VMLGKCK+PEKA LF+ M+ EGC VN E YTALLSAYSR
Sbjct: 126 ELLQEQLWYRPNPGIYIKLIVMLGKCKEPEKAQSLFEMMVEEGCVVNQEAYTALLSAYSR 185
Query: 655 TCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTV 834
+ F EAFS+LE MK+ + PDV TYSIL+KSCL V+ FDKV++LLSDM G++ NTV
Sbjct: 186 SGRFHEAFSILEEMKNIPNCLPDVFTYSILIKSCLQVYDFDKVQILLSDMECMGIKANTV 245
Query: 835 TYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEK 1014
TYNTLID+YGKA +F EME+TL EML++ DCKPDVWTMN TLRA+G SGQIEMMEKCYEK
Sbjct: 246 TYNTLIDSYGKAKRFKEMESTLVEMLRRRDCKPDVWTMNSTLRAFGGSGQIEMMEKCYEK 305
Query: 1015 FQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGD 1194
FQ +GIEPSIKTFNILLDSYGK+ENYEKM AV+++MQ+Y++SWT+VTYN+VIDAFGRAGD
Sbjct: 306 FQSAGIEPSIKTFNILLDSYGKTENYEKMGAVMEFMQKYYFSWTIVTYNIVIDAFGRAGD 365
Query: 1195 LKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNC 1374
LKQMEFLFRLMQSERIKPNCVT CSLVRAYG+AG + K+ VLRFI+NSDV LD+VFFNC
Sbjct: 366 LKQMEFLFRLMQSERIKPNCVTLCSLVRAYGKAGKAEKLGAVLRFIENSDVALDTVFFNC 425
Query: 1375 LVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITSFR 1554
LVDAYG M F E++GVLEMME+ GC+PD +TYR+M+KAYSI MTN E+R ++ S
Sbjct: 426 LVDAYGMMGCFTELKGVLEMMEQSGCKPDKITYRSMIKAYSINGMTNKASELRNLLASLE 485
Query: 1555 R 1557
+
Sbjct: 486 K 486
>gb|EXB96384.1| hypothetical protein L484_023104 [Morus notabilis]
Length = 490
Score = 642 bits (1655), Expect = 0.0
Identities = 312/419 (74%), Positives = 366/419 (87%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VN+K AS+KAIS+ILRREATKA+IE K+G +NSKKLLPRT+LEAL+ERI+ALRWESALKV
Sbjct: 56 VNKKTASRKAISVILRREATKALIETKRGPSNSKKLLPRTVLEALYERISALRWESALKV 115
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWYRPN+ +YIKL+VMLGKCKQPEKA ELFQTM+ EGC VN E YTALLSAY
Sbjct: 116 FELLREQLWYRPNSSVYIKLIVMLGKCKQPEKAFELFQTMVEEGCPVNHESYTALLSAYG 175
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ F++AFSLLE+MK++ D +PDVHTY++L+KSCLH FDKV+ LLSDM +QG+RP+T
Sbjct: 176 RSTRFNQAFSLLEYMKNTPDLQPDVHTYTVLIKSCLHFSDFDKVEALLSDMEAQGIRPST 235
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
VTYN LIDAYGKA KFAEMEA L EML+Q +C+PDVWTMN TLRA+G SGQIE MEKCY+
Sbjct: 236 VTYNVLIDAYGKARKFAEMEAVLVEMLQQEECEPDVWTMNSTLRAFGGSGQIETMEKCYD 295
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ +GIEP+IKTFNILLDSYGK+ YEKM AV++YMQ+YHYSWT+VTYNVVIDAFGRAG
Sbjct: 296 KFQRAGIEPNIKTFNILLDSYGKAGEYEKMGAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 355
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLM+SERIKP+CVT CSLVRAY +AG KI GVLRFI+NSDVTLD++FFN
Sbjct: 356 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAQAGKPEKIGGVLRFIENSDVTLDTIFFN 415
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGR+ AEM+ VLEMM++ GC+PD VTYRTM+KAYS M KE+R I S
Sbjct: 416 CLVDAYGRLGCLAEMKEVLEMMKQNGCKPDKVTYRTMIKAYSSNGMAGQAKELRNFIES 474
Score = 72.4 bits (176), Expect = 6e-10
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Frame = +1
Query: 979 GQIEMMEKCYEKFQ---DSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRY-HYSWT 1146
G+ + EK +E FQ + G + +++ LL +YG+S + + ++++YM+
Sbjct: 140 GKCKQPEKAFELFQTMVEEGCPVNHESYTALLSAYGRSTRFNQAFSLLEYMKNTPDLQPD 199
Query: 1147 LVTYNVVIDAFGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVL- 1323
+ TY V+I + D ++E L M+++ I+P+ VT+ L+ AYG+A +++ VL
Sbjct: 200 VHTYTVLIKSCLHFSDFDKVEALLSDMEAQGIRPSTVTYNVLIDAYGKARKFAEMEAVLV 259
Query: 1324 RFIDNSDVTLDSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIA 1503
+ + D N + A+G Q M + ++ G EP++ T+ ++ +Y A
Sbjct: 260 EMLQQEECEPDVWTMNSTLRAFGGSGQIETMEKCYDKFQRAGIEPNIKTFNILLDSYGKA 319
Query: 1504 RMTNHVKEVREIITSF 1551
+ V E + +
Sbjct: 320 GEYEKMGAVMEYMQKY 335
>ref|XP_004154439.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 511
Score = 638 bits (1646), Expect = e-180
Identities = 309/419 (73%), Positives = 365/419 (87%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIASQKAIS+ILRREATKAVIE+K+G NSKKLLPRT+LEALH+RIT LRWESALKV
Sbjct: 82 VNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKV 141
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWYRP G+YIKL+VMLGKCKQ EKA ELFQ MI EGC+V+ E YTALLSAYS
Sbjct: 142 FELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYS 201
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ L DEAFS+L MK+S D +PDVHTYSIL+KSCL VFAF+K + LLSDM ++G++PNT
Sbjct: 202 RSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNT 261
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
+TYNT IDAYGKA FAEME+ L +ML CKPDVWTMN TLRA+G SGQ+E MEKCYE
Sbjct: 262 ITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYE 321
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ++GI+PSI+TFNILLDSYGK+E+YEKMSAV++YMQ+YHYSWT+VTYN+VIDAFGRAG
Sbjct: 322 KFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 381
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
+LKQME LFRLM+SERIKP+CVT CSLVRAYG+AG KI VL ++NSD+ LD+VF+N
Sbjct: 382 NLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYN 441
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGR++ FAEM+ VL MME+RGC+PD TYRTM +AYS M NH KE++E+IT+
Sbjct: 442 CLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITT 500
Score = 84.7 bits (208), Expect = 1e-13
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Frame = +1
Query: 820 RPNTVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMME 999
RP Y LI GK + + EM+++ C+ + L AY SG ++
Sbjct: 152 RPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEE-GCEVSHESYTALLSAYSRSGLLDEAF 210
Query: 1000 KCYEKFQDS-GIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDA 1176
+ ++S +P + T++IL+ S + + K ++ M +TYN IDA
Sbjct: 211 SILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDA 270
Query: 1177 FGRAGDLKQME-FLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTL 1353
+G+A +ME L ++ + KP+ T S +RA+GR+G + + +
Sbjct: 271 YGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQP 330
Query: 1354 DSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVR 1533
FN L+D+YG+ + + +M V+E M+K +VTY ++ A+ A ++ +
Sbjct: 331 SIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLF 390
Query: 1534 EIITSFR 1554
++ S R
Sbjct: 391 RLMRSER 397
>ref|XP_004139628.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cucumis sativus]
Length = 456
Score = 638 bits (1646), Expect = e-180
Identities = 309/419 (73%), Positives = 365/419 (87%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIASQKAIS+ILRREATKAVIE+K+G NSKKLLPRT+LEALH+RIT LRWESALKV
Sbjct: 27 VNRKIASQKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHDRITTLRWESALKV 86
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWYRP G+YIKL+VMLGKCKQ EKA ELFQ MI EGC+V+ E YTALLSAYS
Sbjct: 87 FELLREQLWYRPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEEGCEVSHESYTALLSAYS 146
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ L DEAFS+L MK+S D +PDVHTYSIL+KSCL VFAF+K + LLSDM ++G++PNT
Sbjct: 147 RSGLLDEAFSILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNT 206
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
+TYNT IDAYGKA FAEME+ L +ML CKPDVWTMN TLRA+G SGQ+E MEKCYE
Sbjct: 207 ITYNTFIDAYGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYE 266
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ++GI+PSI+TFNILLDSYGK+E+YEKMSAV++YMQ+YHYSWT+VTYN+VIDAFGRAG
Sbjct: 267 KFQEAGIQPSIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAG 326
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
+LKQME LFRLM+SERIKP+CVT CSLVRAYG+AG KI VL ++NSD+ LD+VF+N
Sbjct: 327 NLKQMEHLFRLMRSERIKPSCVTLCSLVRAYGQAGKREKIDSVLNLVENSDIMLDTVFYN 386
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGR++ FAEM+ VL MME+RGC+PD TYRTM +AYS M NH KE++E+IT+
Sbjct: 387 CLVDAYGRLECFAEMKKVLGMMEQRGCKPDKTTYRTMARAYSDGGMANHAKEIQELITT 445
Score = 84.7 bits (208), Expect = 1e-13
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 2/247 (0%)
Frame = +1
Query: 820 RPNTVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMME 999
RP Y LI GK + + EM+++ C+ + L AY SG ++
Sbjct: 97 RPYAGMYIKLIVMLGKCKQQEKAYELFQEMIEE-GCEVSHESYTALLSAYSRSGLLDEAF 155
Query: 1000 KCYEKFQDS-GIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDA 1176
+ ++S +P + T++IL+ S + + K ++ M +TYN IDA
Sbjct: 156 SILNEMKNSPDCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPNTITYNTFIDA 215
Query: 1177 FGRAGDLKQME-FLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTL 1353
+G+A +ME L ++ + KP+ T S +RA+GR+G + + +
Sbjct: 216 YGKAKMFAEMESILVDMLNDDGCKPDVWTMNSTLRAFGRSGQLETMEKCYEKFQEAGIQP 275
Query: 1354 DSVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVR 1533
FN L+D+YG+ + + +M V+E M+K +VTY ++ A+ A ++ +
Sbjct: 276 SIQTFNILLDSYGKAESYEKMSAVMEYMQKYHYSWTIVTYNIVIDAFGRAGNLKQMEHLF 335
Query: 1534 EIITSFR 1554
++ S R
Sbjct: 336 RLMRSER 342
>ref|XP_004514268.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Cicer arietinum]
Length = 520
Score = 634 bits (1634), Expect = e-179
Identities = 306/423 (72%), Positives = 371/423 (87%), Gaps = 3/423 (0%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEK--KKGT-NSKKLLPRTILEALHERITALRWESALK 468
NRK+ASQKA+S+ILRREATKA+I+K KKG NSKKLLPRT+LEALHERI ALRWESALK
Sbjct: 88 NRKVASQKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERIAALRWESALK 147
Query: 469 VFDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAY 648
VF+LLREQLWYRP +G+YIKL+VMLGKC+QPEKA ELFQ M+ EGC ++ E YTALLSAY
Sbjct: 148 VFELLREQLWYRPYSGVYIKLIVMLGKCRQPEKASELFQAMVDEGCVLDCESYTALLSAY 207
Query: 649 SRTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPN 828
R+ L D AFSLLE MKS+ +PDV TYSIL+KSCL VFAFDKV+ LLSDM+S G++PN
Sbjct: 208 GRSGLLDRAFSLLEEMKSTPGCQPDVQTYSILIKSCLQVFAFDKVQSLLSDMASLGIKPN 267
Query: 829 TVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCY 1008
TVTYNTLIDAYGKA +F+EME+TL EML + +C+PDVWTMN TLRA+G+ GQIE ME+CY
Sbjct: 268 TVTYNTLIDAYGKAKRFSEMESTLLEMLAEQECQPDVWTMNSTLRAFGNLGQIETMERCY 327
Query: 1009 EKFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRA 1188
+KFQ SGI+P+++TFNILLDSYGK+ ++ KMSAV++YMQ+YHYSWT+VTYN+VIDAFG+A
Sbjct: 328 DKFQTSGIQPNVQTFNILLDSYGKACDFTKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 387
Query: 1189 GDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFF 1368
G+LKQME+LFRLM+SERIKP+CVT CSLVRAY AG KI GVLRF+DNSDVTLD+VFF
Sbjct: 388 GNLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVLRFVDNSDVTLDTVFF 447
Query: 1369 NCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
NCLVDAY R+D EM+GVLE+ME++GC+PD +TYRTM+KAYS M +HVKE+RE++ +
Sbjct: 448 NCLVDAYVRLDCLDEMKGVLEIMEQKGCKPDFITYRTMIKAYSSKGMQSHVKELRELLIT 507
Query: 1549 FRR 1557
+R
Sbjct: 508 VKR 510
Score = 91.3 bits (225), Expect = 1e-15
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 44/283 (15%)
Frame = +1
Query: 535 VMLGKCKQP---EKALELFQTMIHEGCDVNLEVYTALLSAYSRTCLFDEAFSLLEHMKSS 705
+++ C Q +K L M G N Y L+ AY + F E S L M +
Sbjct: 238 ILIKSCLQVFAFDKVQSLLSDMASLGIKPNTVTYNTLIDAYGKAKRFSEMESTLLEMLAE 297
Query: 706 SDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVTYNTLIDAYGKADKFAE 885
+ +PDV T + L++ ++ + ++ + G++PN T+N L+D+YGKA F +
Sbjct: 298 QECQPDVWTMNSTLRAFGNLGQIETMERCYDKFQTSGIQPNVQTFNILLDSYGKACDFTK 357
Query: 886 MEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKFQDSGIEPSIKT----- 1050
M A + M K H V T N + A+G +G ++ ME + + I+PS T
Sbjct: 358 MSAVMEYMQKYHYSWTIV-TYNIVIDAFGKAGNLKQMEYLFRLMRSERIKPSCVTLCSLV 416
Query: 1051 ------------------------------FNILLDSYGKSENYEKMSAVIQYMQRYHYS 1140
FN L+D+Y + + ++M V++ M++
Sbjct: 417 RAYAHAGKPEKIGGVLRFVDNSDVTLDTVFFNCLVDAYVRLDCLDEMKGVLEIMEQKGCK 476
Query: 1141 WTLVTYNVVIDAFGRAG------DLKQMEFLFRLMQSERIKPN 1251
+TY +I A+ G +L+++ + ER KP+
Sbjct: 477 PDFITYRTMIKAYSSKGMQSHVKELRELLITVKRPPLERNKPD 519
>ref|XP_002303044.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222844770|gb|EEE82317.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 485
Score = 631 bits (1628), Expect = e-178
Identities = 312/419 (74%), Positives = 363/419 (86%), Gaps = 1/419 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKKG-TNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIASQKAIS+ILRREATKAVIEKK+G TNSKKLLP+T+LEALHERITALRW SAL+V
Sbjct: 67 VNRKIASQKAISVILRREATKAVIEKKRGPTNSKKLLPQTVLEALHERITALRWASALEV 126
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
F+LLREQLWYRP G+Y+KL+VMLGKCKQP+KA +LFQ MI EGC V E YTALLSAY
Sbjct: 127 FELLREQLWYRPYAGMYVKLIVMLGKCKQPDKAHQLFQAMIDEGCAVTHESYTALLSAYG 186
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ LFD+AFS++E MK++ D +PDVHTYSIL+KSCL VFAFDKV++LLSDM S G+RPNT
Sbjct: 187 RSGLFDKAFSIMEEMKNTPDCRPDVHTYSILIKSCLQVFAFDKVQVLLSDMESLGIRPNT 246
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
VT FAEMEATL EML Q DC+PDVWTMN T+RA+G SGQ+EMME CYE
Sbjct: 247 VT-------------FAEMEATLMEMLSQQDCEPDVWTMNSTIRAFGGSGQMEMMENCYE 293
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ +GIEP+IKTFNILLDSYGK+ NY+KMSAV++YMQRYHYSWT+VTYNVVIDAFGRAG
Sbjct: 294 KFQSAGIEPNIKTFNILLDSYGKAGNYQKMSAVMEYMQRYHYSWTIVTYNVVIDAFGRAG 353
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DLKQME+LFRLM+SERIKP+CVT CSLVRAY AG KI VLRFI+NSDVTLD+VFFN
Sbjct: 354 DLKQMEYLFRLMRSERIKPSCVTLCSLVRAYREAGKPEKIGSVLRFIENSDVTLDTVFFN 413
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
CLVDAYGR++ FAEM+ VLE+ME++GC+PD VTYRTM+KAYSI MT+H K++R ++ S
Sbjct: 414 CLVDAYGRLECFAEMKEVLELMEEKGCKPDKVTYRTMIKAYSIKGMTSHAKKLRNLLGS 472
>ref|XP_003532287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48730,
chloroplastic-like [Glycine max]
Length = 515
Score = 629 bits (1621), Expect = e-177
Identities = 302/427 (70%), Positives = 372/427 (87%), Gaps = 7/427 (1%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEK------KKGT-NSKKLLPRTILEALHERITALRWE 456
NRK+ASQKA+S+IL REATKA+I+K KKG NSKKLLPRT+LEALHER+TALRWE
Sbjct: 79 NRKVASQKAVSVILWREATKAMIDKSGGGRKKKGPINSKKLLPRTVLEALHERVTALRWE 138
Query: 457 SALKVFDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTAL 636
SALKVF+LL EQ+WY+P+TG+YIKL+VMLGKCKQPEKA ELFQ M+ EGC ++ E YTAL
Sbjct: 139 SALKVFELLHEQIWYKPDTGVYIKLIVMLGKCKQPEKAHELFQAMVDEGCVLDCESYTAL 198
Query: 637 LSAYSRTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQG 816
LSAYSR+ L D+AFSLLE MK++ +PDV TYSILLKSCL VFAFDK++ LLSDM+++G
Sbjct: 199 LSAYSRSGLLDKAFSLLEEMKNTPGCQPDVQTYSILLKSCLQVFAFDKIQSLLSDMTNRG 258
Query: 817 VRPNTVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMM 996
++PNTVTYNTLIDAYGKA KF+EME+ L EML C+PDVWTMN TLRA+G+ GQIE M
Sbjct: 259 IKPNTVTYNTLIDAYGKARKFSEMESILVEMLADRYCQPDVWTMNSTLRAFGNIGQIETM 318
Query: 997 EKCYEKFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDA 1176
EKCYEKFQ++GI+P+++TFNILLDSYGK+++Y+KMSAV++YMQ+YHYSWT+VT+N+VIDA
Sbjct: 319 EKCYEKFQNAGIQPNVQTFNILLDSYGKAQDYKKMSAVMEYMQKYHYSWTIVTFNIVIDA 378
Query: 1177 FGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLD 1356
FG+AGDLKQME+LFRLM+SERIKP+CVT CSLVRAY RAG KI+GVLRF++NSDV LD
Sbjct: 379 FGKAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKISGVLRFVENSDVLLD 438
Query: 1357 SVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVRE 1536
+VFFNCLVDAY R+ AEM+GVLEMM++ GC+PD+VTYRTM+K Y+ M +H KE+RE
Sbjct: 439 TVFFNCLVDAYARLGCLAEMKGVLEMMKQNGCKPDIVTYRTMIKTYTYKGMDSHAKELRE 498
Query: 1537 IITSFRR 1557
++ + R
Sbjct: 499 LLPTVNR 505
>dbj|BAB09426.1| unnamed protein product [Arabidopsis thaliana]
Length = 495
Score = 622 bits (1603), Expect = e-175
Identities = 309/417 (74%), Positives = 359/417 (86%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEKKKGTNSKKLLPRTILEALHERITALRWESALKVFD 477
N KIAS+KAISIILRREATK++IEKKKG SKKLLPRT+LE+LHERITALRWESA++VF+
Sbjct: 81 NTKIASRKAISIILRREATKSIIEKKKG--SKKLLPRTVLESLHERITALRWESAIQVFE 138
Query: 478 LLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRT 657
LLREQLWY+PN GIY+KL+VMLGKCKQPEKA ELFQ MI+EGC VN EVYTAL+SAYSR+
Sbjct: 139 LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRS 198
Query: 658 CLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVT 837
FD AF+LLE MKSS + +PDVHTYSIL+KS L VFAFDKV+ LLSDM QG+RPNT+T
Sbjct: 199 GRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTIT 258
Query: 838 YNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKF 1017
F EME+TL +ML + DCKPD WTMN TLRA+G +GQIEMME CYEKF
Sbjct: 259 -------------FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 305
Query: 1018 QDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDL 1197
Q SGIEP+I+TFNILLDSYGKS NY+KMSAV++YMQ+YHYSWT+VTYNVVIDAFGRAGDL
Sbjct: 306 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 365
Query: 1198 KQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCL 1377
KQME+LFRLMQSERI P+CVT CSLVRAYGRA + KI GVLRFI+NSD+ LD VFFNCL
Sbjct: 366 KQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCL 425
Query: 1378 VDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREIITS 1548
VDAYGRM++FAEM+GVLE+MEK+G +PD +TYRTM+KAY I+ MT HVKE+ ++ S
Sbjct: 426 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGVVES 482
>gb|ESW12606.1| hypothetical protein PHAVU_008G126700g [Phaseolus vulgaris]
Length = 513
Score = 622 bits (1603), Expect = e-175
Identities = 301/425 (70%), Positives = 364/425 (85%), Gaps = 5/425 (1%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEK----KKGT-NSKKLLPRTILEALHERITALRWESA 462
N+K+ASQKA+S+IL REATKAVI+K KKG N+KKLLPRT+LEALHER+ ALRWESA
Sbjct: 79 NQKLASQKAVSVILWREATKAVIDKSGRKKKGPINAKKLLPRTVLEALHERVAALRWESA 138
Query: 463 LKVFDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLS 642
LKVF+LLREQ+WY PNTGIYIKL+VMLGKCKQPEKA LF M+ EGC ++ E YTALLS
Sbjct: 139 LKVFELLREQIWYSPNTGIYIKLIVMLGKCKQPEKAHGLFLAMVDEGCVLDCESYTALLS 198
Query: 643 AYSRTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVR 822
AYSR+ L D+AF+LLE MK++ +PDV TYSIL+KSCL VFAFDKV+ LLSDM++ G++
Sbjct: 199 AYSRSGLLDKAFTLLEEMKNTPGCQPDVQTYSILIKSCLQVFAFDKVQGLLSDMANHGIK 258
Query: 823 PNTVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEK 1002
PNTVTYNTLIDAYGKA KF+EME+ L EML DC+PD WTMN TLRA+G+ GQIE MEK
Sbjct: 259 PNTVTYNTLIDAYGKARKFSEMESILVEMLADRDCQPDAWTMNSTLRAFGNIGQIETMEK 318
Query: 1003 CYEKFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFG 1182
CYEKFQ +GI+P+++TFNILLDSYGK+E Y+KMSAV++YMQRYHYSWT+VT+N+VIDAFG
Sbjct: 319 CYEKFQTAGIQPNVQTFNILLDSYGKAEEYKKMSAVMEYMQRYHYSWTIVTFNIVIDAFG 378
Query: 1183 RAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSV 1362
+AGDLKQME+LFRLM+SERIKP+CVT CSLVRAY AG KI GV+RF++NSDV LD+V
Sbjct: 379 KAGDLKQMEYLFRLMRSERIKPSCVTLCSLVRAYAHAGKPEKIGGVMRFVENSDVLLDTV 438
Query: 1363 FFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREII 1542
FFNCLVDAYGR+ AEM+GV EMM++ GC+PD++TYRTM+KAYS M H KE+RE++
Sbjct: 439 FFNCLVDAYGRLGCLAEMKGVPEMMKQSGCKPDIITYRTMIKAYSFKGMDAHAKEIRELL 498
Query: 1543 TSFRR 1557
+ R
Sbjct: 499 PTVTR 503
>ref|XP_002863920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309755|gb|EFH40179.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 498
Score = 619 bits (1597), Expect = e-174
Identities = 310/414 (74%), Positives = 355/414 (85%)
Frame = +1
Query: 298 NRKIASQKAISIILRREATKAVIEKKKGTNSKKLLPRTILEALHERITALRWESALKVFD 477
N KIAS+KAISIILRREATK +IEKKKG SKKLLPRT+LE+LHERITALRWESAL+VF+
Sbjct: 84 NTKIASRKAISIILRREATKEIIEKKKG--SKKLLPRTVLESLHERITALRWESALQVFE 141
Query: 478 LLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYSRT 657
LLREQLWY+PN GIY+KL+VMLGKCKQPEKA ELFQ MI+EGC VN EVYTALLSAYSR+
Sbjct: 142 LLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALLSAYSRS 201
Query: 658 CLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNTVT 837
FD AF+LLE MKSS + +PDVHTYSIL+KS L VFAFDKV LLSDM G+RPNT+T
Sbjct: 202 GRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVHDLLSDMRRLGIRPNTIT 261
Query: 838 YNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYEKF 1017
F EME+TL +ML + DCKPD WTMN TLRA+G +GQIEMME CYEKF
Sbjct: 262 -------------FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKF 308
Query: 1018 QDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAGDL 1197
Q SGIEP+I+TFNILLDSYGKS NY+KMSAV++YMQ+YHYSWT+VTYNVVIDAFGRAGDL
Sbjct: 309 QSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDL 368
Query: 1198 KQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFNCL 1377
KQME+LFRLMQSERI P+CVT CSLVRAYGRAG + KI GVLRFI+NSD+ LD VFFNCL
Sbjct: 369 KQMEYLFRLMQSERIIPSCVTLCSLVRAYGRAGKADKIGGVLRFIENSDIRLDLVFFNCL 428
Query: 1378 VDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVREI 1539
VDAYGRM++FAEM+GVLE+MEK+G +PD +TYRTM+KAY I+ MT HVKE+ +
Sbjct: 429 VDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHGV 482
>ref|NP_001056939.1| Os06g0172000 [Oryza sativa Japonica Group]
gi|55773690|dbj|BAD72273.1| putative PPR2 [Oryza sativa
Japonica Group] gi|113594979|dbj|BAF18853.1| Os06g0172000
[Oryza sativa Japonica Group]
gi|215697063|dbj|BAG91057.1| unnamed protein product
[Oryza sativa Japonica Group] gi|218197679|gb|EEC80106.1|
hypothetical protein OsI_21852 [Oryza sativa Indica
Group] gi|222635046|gb|EEE65178.1| hypothetical protein
OsJ_20289 [Oryza sativa Japonica Group]
Length = 511
Score = 586 bits (1511), Expect = e-165
Identities = 287/417 (68%), Positives = 354/417 (84%), Gaps = 2/417 (0%)
Frame = +1
Query: 295 VNRKIASQKAISIILRREATKAVIEKKK-GTNSKKLLPRTILEALHERITALRWESALKV 471
VNRKIAS+KA+S+ILRREATKAV++K+K G +++LLPRT+LEALHERITALRW+SALKV
Sbjct: 87 VNRKIASRKALSVILRREATKAVLDKRKPGKGTRRLLPRTVLEALHERITALRWDSALKV 146
Query: 472 FDLLREQLWYRPNTGIYIKLMVMLGKCKQPEKALELFQTMIHEGCDVNLEVYTALLSAYS 651
FDL+R+Q+WYRP GIY+KL+ MLGKCKQPE+A ELFQ M+ EGC NLE YTAL+SAYS
Sbjct: 147 FDLMRDQVWYRPYVGIYVKLITMLGKCKQPERAHELFQAMVDEGCAPNLESYTALVSAYS 206
Query: 652 RTCLFDEAFSLLEHMKSSSDHKPDVHTYSILLKSCLHVFAFDKVKMLLSDMSSQGVRPNT 831
R+ FD AFSLLE MK++ +PDV TYSIL+KSCLH + F++VK L+ DM+ G+RPN
Sbjct: 207 RSGRFDRAFSLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNV 266
Query: 832 VTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMMEKCYE 1011
VTYNTLIDAYGKA +FAEME+TL EML ++ CKPDVWTMN TLRA+G SGQIE ME CYE
Sbjct: 267 VTYNTLIDAYGKAGRFAEMESTLLEMLTEN-CKPDVWTMNSTLRAFGGSGQIETMESCYE 325
Query: 1012 KFQDSGIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDAFGRAG 1191
KFQ SGI P+IKT+NILLDSYGK++ YEKM AV++YMQ+Y+YSWT+VTYNVVIDAFGRAG
Sbjct: 326 KFQASGISPNIKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAG 385
Query: 1192 DLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLDSVFFN 1371
DL+QME++FRLM+SERIKPNCVT CSLVRAYGRAG+ KI VLR ++NSD+TLD VFFN
Sbjct: 386 DLEQMEYIFRLMKSERIKPNCVTLCSLVRAYGRAGDVKKIKTVLRIVENSDITLDIVFFN 445
Query: 1372 CLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNH-VKEVREI 1539
CLVDA+GR+ AEM VL++M+ + C+PD VT TM+K + I + +H V+ +R++
Sbjct: 446 CLVDAFGRVGCLAEMWDVLDIMKLQRCKPDKVTCTTMIKWFLIKGIDDHRVQYLRDL 502
Score = 101 bits (252), Expect = 9e-19
Identities = 66/246 (26%), Positives = 121/246 (49%), Gaps = 1/246 (0%)
Frame = +1
Query: 820 RPNTVTYNTLIDAYGKADKFAEMEATLAEMLKQHDCKPDVWTMNCTLRAYGSSGQIEMME 999
RP Y LI GK K E L + + C P++ + + AY SG+ +
Sbjct: 157 RPYVGIYVKLITMLGKC-KQPERAHELFQAMVDEGCAPNLESYTALVSAYSRSGRFDRAF 215
Query: 1000 KCYEKFQDS-GIEPSIKTFNILLDSYGKSENYEKMSAVIQYMQRYHYSWTLVTYNVVIDA 1176
E+ + + G P ++T++IL+ S + ++E++ +++ M R +VTYN +IDA
Sbjct: 216 SLLEQMKATPGCRPDVQTYSILIKSCLHAYDFERVKYLMEDMARAGIRPNVVTYNTLIDA 275
Query: 1177 FGRAGDLKQMEFLFRLMQSERIKPNCVTFCSLVRAYGRAGNSSKIAGVLRFIDNSDVTLD 1356
+G+AG +ME M +E KP+ T S +RA+G +G + S ++ +
Sbjct: 276 YGKAGRFAEMESTLLEMLTENCKPDVWTMNSTLRAFGGSGQIETMESCYEKFQASGISPN 335
Query: 1357 SVFFNCLVDAYGRMDQFAEMRGVLEMMEKRGCEPDLVTYRTMMKAYSIARMTNHVKEVRE 1536
+N L+D+YG+ + +M V+E M+K +VTY ++ A+ A ++ +
Sbjct: 336 IKTYNILLDSYGKAKMYEKMGAVMEYMQKYYYSWTIVTYNVVIDAFGRAGDLEQMEYIFR 395
Query: 1537 IITSFR 1554
++ S R
Sbjct: 396 LMKSER 401