BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00001936
         (250 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006827552.1| hypothetical protein AMTR_s00009p00218020 [A...   116   3e-24
gb|AFW63956.1| hypothetical protein ZEAMMB73_806586 [Zea mays]        115   8e-24
ref|NP_001148551.1| LOC100282167 [Zea mays] gi|195620340|gb|ACG3...   115   8e-24
ref|NP_567724.1| mediator of RNA polymerase II transcription sub...   114   2e-23
ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutr...   114   2e-23
ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [A...   114   2e-23
ref|XP_001754804.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_001762373.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_001771994.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_001774486.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_001779689.1| predicted protein [Physcomitrella patens] gi...   114   2e-23
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra...   113   2e-23
gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsi...   113   2e-23
ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II tra...   113   3e-23
gb|AAC32120.1| probable fibrillarin [Picea mariana]                   113   3e-23
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G...   113   3e-23
gb|ABK26802.1| unknown [Picea sitchensis]                             113   3e-23
ref|XP_004954433.1| PREDICTED: mediator of RNA polymerase II tra...   112   4e-23
dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     112   4e-23
dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Grou...   112   4e-23

>ref|XP_006827552.1| hypothetical protein AMTR_s00009p00218020 [Amborella trichopoda]
           gi|548832172|gb|ERM94968.1| hypothetical protein
           AMTR_s00009p00218020 [Amborella trichopoda]
          Length = 300

 Score =  116 bits (291), Expect = 3e-24
 Identities = 57/87 (65%), Positives = 71/87 (81%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ I+V+N+DGT+ EYRVWNP RSKLA AI SGV+NIW+ PGSRVLY+G   GTTVSH+
Sbjct: 93  GEKRIAVQNEDGTKVEYRVWNPFRSKLAAAILSGVDNIWISPGSRVLYLGAASGTTVSHV 152

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SDLVGP+G+VYA+  S+     +VNMA
Sbjct: 153 SDLVGPNGIVYAVEFSNRSGRDLVNMA 179


>gb|AFW63956.1| hypothetical protein ZEAMMB73_806586 [Zea mays]
          Length = 245

 Score =  115 bits (287), Expect = 8e-24
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ +SV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+
Sbjct: 40  GEKRVSVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHV 99

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGPDGLVYA+  S      +VNMA
Sbjct: 100 SDIVGPDGLVYAVEFSHRSGRDLVNMA 126


>ref|NP_001148551.1| LOC100282167 [Zea mays] gi|195620340|gb|ACG32000.1| fibrillarin-2
           [Zea mays] gi|413924026|gb|AFW63958.1| fibrillarin-2
           [Zea mays]
          Length = 308

 Score =  115 bits (287), Expect = 8e-24
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ +SV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+
Sbjct: 103 GEKRVSVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHV 162

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGPDGLVYA+  S      +VNMA
Sbjct: 163 SDIVGPDGLVYAVEFSHRSGRDLVNMA 189


>ref|NP_567724.1| mediator of RNA polymerase II transcription subunit 36a
           [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=Histone-glutamine methyltransferase; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| mediator of RNA polymerase
           II transcription subunit 36a [Arabidopsis thaliana]
          Length = 320

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = -1

Query: 247 EELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHLS 68
           E+ ISV+N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG++VLY+G   GTTVSH+S
Sbjct: 114 EKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVS 173

Query: 67  DLVGPDGLVYALGLSD----VVVNMA 2
           DLVGP+G VYA+  S      +VNMA
Sbjct: 174 DLVGPEGCVYAVEFSHRSGRDLVNMA 199


>ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutrema salsugineum]
           gi|557114458|gb|ESQ54741.1| hypothetical protein
           EUTSA_v10025746mg [Eutrema salsugineum]
          Length = 320

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = -1

Query: 247 EELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHLS 68
           E+ ISV+N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG++VLY+G   GTTVSH+S
Sbjct: 114 EKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVS 173

Query: 67  DLVGPDGLVYALGLSD----VVVNMA 2
           DLVGP+G VYA+  S      +VNMA
Sbjct: 174 DLVGPEGCVYAVEFSHRSGRDLVNMA 199


>ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [Amborella trichopoda]
           gi|548839426|gb|ERM99715.1| hypothetical protein
           AMTR_s00099p00093470 [Amborella trichopoda]
          Length = 245

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/76 (68%), Positives = 64/76 (84%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+DGT+ EYRVWNP RSKLA A+ SGV+NIW+ PGSRVLY+G   GTTVSH+
Sbjct: 40  GEKRISVQNEDGTKEEYRVWNPFRSKLAAAVLSGVDNIWIAPGSRVLYLGAASGTTVSHV 99

Query: 70  SDLVGPDGLVYALGLS 23
           SD+VGP G+VYA+  S
Sbjct: 100 SDIVGPTGMVYAVEFS 115


>ref|XP_001754804.1| predicted protein [Physcomitrella patens]
           gi|162693908|gb|EDQ80258.1| predicted protein
           [Physcomitrella patens]
          Length = 261

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 54  GEKRISVDNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHV 113

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+  S      +VNMA
Sbjct: 114 SDVVGPSGIVYAVEFSHRSGRDLVNMA 140


>ref|XP_001762373.1| predicted protein [Physcomitrella patens]
           gi|162686451|gb|EDQ72840.1| predicted protein
           [Physcomitrella patens]
          Length = 271

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 64  GEKRISVDNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHV 123

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+  S      +VNMA
Sbjct: 124 SDVVGPSGIVYAVEFSHRSGRDLVNMA 150


>ref|XP_001771994.1| predicted protein [Physcomitrella patens]
           gi|162676776|gb|EDQ63255.1| predicted protein
           [Physcomitrella patens]
          Length = 270

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 63  GEKRISVDNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHV 122

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+  S      +VNMA
Sbjct: 123 SDVVGPSGIVYAVEFSHRSGRDLVNMA 149


>ref|XP_001774486.1| predicted protein [Physcomitrella patens]
           gi|162674198|gb|EDQ60710.1| predicted protein
           [Physcomitrella patens]
          Length = 271

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 64  GEKRISVDNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHV 123

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+  S      +VNMA
Sbjct: 124 SDVVGPSGIVYAVEFSHRSGRDLVNMA 150


>ref|XP_001779689.1| predicted protein [Physcomitrella patens]
           gi|162668887|gb|EDQ55485.1| predicted protein
           [Physcomitrella patens]
          Length = 319

 Score =  114 bits (284), Expect = 2e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 112 GEKRISVDNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHV 171

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+  S      +VNMA
Sbjct: 172 SDVVGPSGIVYAVEFSHRSGRDLVNMA 198


>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Solanum tuberosum]
          Length = 314

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = -1

Query: 247 EELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHLS 68
           E+ ISV+N+DGT+ EYRVWNP RSKLA AI  GV++IW+KPG+RVLY+G   GTTVSH+S
Sbjct: 110 EKRISVQNEDGTKVEYRVWNPFRSKLAAAILGGVDDIWIKPGARVLYLGAASGTTVSHVS 169

Query: 67  DLVGPDGLVYALGLSD----VVVNMA 2
           DLVGPDG+VYA+  S      +VNMA
Sbjct: 170 DLVGPDGVVYAVEFSHRSGRDLVNMA 195


>gb|AAK76701.1| putative fibrillarin 2 protein AtFib2 [Arabidopsis thaliana]
          Length = 320

 Score =  113 bits (283), Expect = 2e-23
 Identities = 56/86 (65%), Positives = 69/86 (80%), Gaps = 4/86 (4%)
 Frame = -1

Query: 247 EELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHLS 68
           E+ ISV+N+DGT+TEYRVWNP RSKLA AI  GV+NIW+KPG++VLY+G   GTTVSH+S
Sbjct: 114 EKRISVQNEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVS 173

Query: 67  DLVGPDGLVYALGLSD----VVVNMA 2
           DLVGP+G VYA+  S      +VNMA
Sbjct: 174 DLVGPEGSVYAVEFSHRSGRDLVNMA 199


>ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Oryza brachyantha]
          Length = 308

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+
Sbjct: 103 GEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGGASGTTVSHV 162

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP GLVYA+  S      +VNMA
Sbjct: 163 SDIVGPTGLVYAVEFSHRSGRDLVNMA 189


>gb|AAC32120.1| probable fibrillarin [Picea mariana]
          Length = 249

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+D T+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 41  GEKRISVQNEDSTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHV 100

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+ +S      +VNMA
Sbjct: 101 SDIVGPTGIVYAVEMSHRSGRDLVNMA 127


>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222630379|gb|EEE62511.1| hypothetical protein
           OsJ_17309 [Oryza sativa Japonica Group]
          Length = 309

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+
Sbjct: 104 GEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGGASGTTVSHV 163

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP GLVYA+  S      +VNMA
Sbjct: 164 SDIVGPTGLVYAVEFSHRSGRDLVNMA 190


>gb|ABK26802.1| unknown [Picea sitchensis]
          Length = 312

 Score =  113 bits (282), Expect = 3e-23
 Identities = 55/87 (63%), Positives = 69/87 (79%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+D T+TEYRVWNP RSKLA AI  GV+NIW+KPG+ VLY+G   GTTVSH+
Sbjct: 104 GEKRISVQNEDSTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHV 163

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP G+VYA+ +S      +VNMA
Sbjct: 164 SDIVGPTGIVYAVEMSHRSGRDLVNMA 190


>ref|XP_004954433.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Setaria italica]
          Length = 306

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/86 (62%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
 Frame = -1

Query: 247 EELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHLS 68
           E+ +SV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+S
Sbjct: 103 EKRVSVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHVS 162

Query: 67  DLVGPDGLVYALGLSD----VVVNMA 2
           D+VGPDGLVYA+  S      +VNMA
Sbjct: 163 DIVGPDGLVYAVEFSHRSGRDLVNMA 188


>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+LI V+N+DGTE EYRV +P RSKL  AI  GV NIW+KPGSRV+Y+G VCG TVS L
Sbjct: 272 GEKLIHVQNEDGTEVEYRVCDPRRSKLGAAILGGVTNIWIKPGSRVMYVGKVCGVTVSDL 331

Query: 70  SDLVGPDGLVYALGLSDVVVNM 5
           SD+VG DGLVY +G SD V ++
Sbjct: 332 SDIVGLDGLVYVVGNSDDVTHV 353


>dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group]
           gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza
           sativa Japonica Group] gi|125541665|gb|EAY88060.1|
           hypothetical protein OsI_09490 [Oryza sativa Indica
           Group] gi|125584186|gb|EAZ25117.1| hypothetical protein
           OsJ_08915 [Oryza sativa Japonica Group]
          Length = 306

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/87 (63%), Positives = 68/87 (78%), Gaps = 4/87 (4%)
 Frame = -1

Query: 250 GEELISVKNKDGTETEYRVWNPSRSKLAGAIQSGVNNIWVKPGSRVLYMGDVCGTTVSHL 71
           GE+ ISV+N+DGT+ EYRVWNP RSKLA A+  GV+NIW+ PG+RVLY+G   GTTVSH+
Sbjct: 101 GEKRISVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDNIWIAPGTRVLYLGAASGTTVSHV 160

Query: 70  SDLVGPDGLVYALGLSD----VVVNMA 2
           SD+VGP GLVYA+  S      +VNMA
Sbjct: 161 SDIVGPTGLVYAVEFSHRSGRDLVNMA 187