BLASTX nr result
ID: Rheum21_contig00001858
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00001858
(3458 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao] 969 0.0
emb|CBI24290.3| unnamed protein product [Vitis vinifera] 966 0.0
gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus pe... 965 0.0
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li... 957 0.0
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis] 956 0.0
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li... 941 0.0
ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu... 941 0.0
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr... 935 0.0
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr... 929 0.0
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi... 928 0.0
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li... 928 0.0
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps... 928 0.0
gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus... 927 0.0
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li... 927 0.0
ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-li... 926 0.0
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li... 923 0.0
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li... 923 0.0
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ... 922 0.0
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li... 922 0.0
tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea m... 910 0.0
>gb|EOY19345.1| Replication factor C subunit 1 [Theobroma cacao]
Length = 1012
Score = 969 bits (2504), Expect = 0.0
Identities = 546/976 (55%), Positives = 650/976 (66%), Gaps = 8/976 (0%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPALASEKPPSASQTEKSGDQVGVTRRKSSKYFDKDQQKAT 396
SD+RKWFMK HDKG G SKPA P + G + RRK+SKYF +Q+
Sbjct: 2 SDIRKWFMKAHDKGKGNASKPA----NPAPTNTDSVPGGRENSGRRKTSKYFPAGKQQPK 57
Query: 397 LEKEKEQLPTPKTTKRGGDNLREEV-KPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVDVT 573
E+ E+LP KR N E V KP PSKK + TVDVT
Sbjct: 58 GEQGTEELPA----KRKVQNENESVEKPPPSKKPSKVGIDDDFVLPK-----SRNTVDVT 108
Query: 574 ANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 753
+K+ K S + V++K ED E
Sbjct: 109 PSKKRKSGSGRGVAQKAEDNDESDEDDAKDLESPVKSGGRGGRGGTGASVAPASGRGRGR 168
Query: 754 XXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRHGG 933
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKRHGG
Sbjct: 169 GRGG--FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGG 226
Query: 934 RITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDPKK 1113
RIT +VSKKT+YLLCDEDIEGRKS+KAKELG PFLTEDGLFD+IRASN K+ ++ + KK
Sbjct: 227 RITTAVSKKTNYLLCDEDIEGRKSSKAKELGIPFLTEDGLFDMIRASNCGKAHSKEESKK 286
Query: 1114 TPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTWTD 1293
+ + ++++PK+SPQK++ K N + AK S K ++T+S S K Q Q ++LTWT+
Sbjct: 287 SAESFAASLPKKSPQKMEVKSNSS---SAKISGK-SLTTSVSSTKQRGQPIQHSSLTWTE 342
Query: 1294 KYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTPGI 1467
KYRPK P +M GNQ++ QLH+WL+ W+ +FL VLLSGTPGI
Sbjct: 343 KYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKAVLLSGTPGI 402
Query: 1468 GKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGAER 1647
GKTTSAKLVS+MLGF+ IEVNASDSRGKA++ I KGIGGS ANSIKEL+SNE+L+ +R
Sbjct: 403 GKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSVNMDR 462
Query: 1648 SKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLPL 1827
SKH KTVLIMDEVDGMSAGDRGG+ADL NDRYSQKLKSLVNYCL L
Sbjct: 463 SKHVKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLL 522
Query: 1828 NFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKY 2007
+FRKPTKQQMAKRLMQ+AN E LQVNEIAL+ELAER NGD+RMA+NQLQYMSLSMSVIKY
Sbjct: 523 SFRKPTKQQMAKRLMQVANAEGLQVNEIALQELAERVNGDMRMALNQLQYMSLSMSVIKY 582
Query: 2008 EDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYVNY 2187
+DI++RL S SKDEDISPFTAVDKLFG GGKLRMD+RIDLSMSDPDLVPLLIQENY+NY
Sbjct: 583 DDIRQRLLSGSKDEDISPFTAVDKLFGIYGGKLRMDQRIDLSMSDPDLVPLLIQENYINY 642
Query: 2188 KPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXXXH 2367
+PS +GKD+ G+KRMNL+A+AAESI +GDIINVQIRRYR H
Sbjct: 643 RPSSIGKDDSGMKRMNLIAQAAESIGDGDIINVQIRRYRQWQLSQAGSLSSCIIPAALLH 702
Query: 2368 GSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXXXX 2547
G RE EQGERNFNRFGGWLGKNST KNYRLLEDLHVH+LASR S+
Sbjct: 703 GQRETLEQGERNFNRFGGWLGKNSTMSKNYRLLEDLHVHILASRESSSGRETLRLDYLTV 762
Query: 2548 XXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAVKS 2727
PKDEAVK+VVEFM+ YSI+QEDFDT+VELSKF+G NPL+GI AVK+
Sbjct: 763 LLTQLTNPLRDKPKDEAVKQVVEFMNAYSISQEDFDTVVELSKFQGQSNPLEGIPAAVKA 822
Query: 2728 ALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESEDEV 2907
ALTKAY EGS +++V+ ADL+TLPG LEP+++ + E+N ESE E
Sbjct: 823 ALTKAYNEGSKTQMVRAADLVTLPGMKKAPKKRIAAILEPSDDVLGEENGDTLPESE-EK 881
Query: 2908 TSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAASA 3087
+SDTE+ E +S ++KG++VQ+ELKG G+SS A+ +
Sbjct: 882 SSDTED-LEGTTDGETLRAELQSLNSKGIEVQMELKGTGNSSAKKAPAGRGRGGKGASGS 940
Query: 3088 --KKTGQGS---AKRK 3120
KK G+GS AKRK
Sbjct: 941 AEKKGGRGSGAGAKRK 956
>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
Length = 941
Score = 966 bits (2498), Expect = 0.0
Identities = 511/790 (64%), Positives = 598/790 (75%), Gaps = 6/790 (0%)
Frame = +1
Query: 772 FMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRHGGRITGSV 951
FMNFGERKDPP+KG KEVPEG +DCLAGLTFV+SGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217
Query: 952 SKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDPKKTPDKTS 1131
SKKT++LLCDEDI G KSAKAKELGT FLTEDGLFD+I ASN +K+PARG+PKK+ DK
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277
Query: 1132 SAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTWTDKYRPKT 1311
A PK+SPQK+++K +Q V++ K +V A T PK Q A+LTWT+KY+PK
Sbjct: 278 LATPKKSPQKVEKKVDQVVNSSGKRTVLAATT-----PKHIYQTIGHASLTWTEKYKPKV 332
Query: 1312 PTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTPGIGKTTSA 1485
P D++GNQ++ KQLH+WL+ W+ +FLH VLLSGTPGIGKTTSA
Sbjct: 333 PNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSA 392
Query: 1486 KLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGAERSKHQKT 1665
KLVS+MLGF+AIEVNASD+RGKAN+ I KGIGGS ANSIKEL+SNE+L A +RSKH KT
Sbjct: 393 KLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKT 452
Query: 1666 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLPLNFRKPT 1845
VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL L+FRKPT
Sbjct: 453 VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 512
Query: 1846 KQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKYEDIKKR 2025
KQQMAKRL+Q+AN E LQVNEIALEELAER NGD+RMA+NQLQYMSLSMSVIKY+D+++R
Sbjct: 513 KQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQR 572
Query: 2026 LQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYVNYKPSGVG 2205
L SS+KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSDPDLVPLLIQENY+NY+P+ G
Sbjct: 573 LLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAG 632
Query: 2206 KDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXXXHGSREIF 2385
KD++G+KRM+LLARAAESI +GDIINVQIRRYR HG RE
Sbjct: 633 KDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETL 692
Query: 2386 EQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXXXXXXXXXX 2565
EQGERNFNRFGGWLGKNST GKN RLLEDLHVH+LASR SN
Sbjct: 693 EQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLT 752
Query: 2566 XXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAVKSALTKAY 2745
LPKD+AV+KVVEFMDLYSI+QEDFDTIVELSKF+G+P+PL+GIQPAVKSALTKAY
Sbjct: 753 DPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAY 812
Query: 2746 KEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESEDEVTSDTEN 2925
+GSSSRLV+ ADLITLPG LEP ++E+A +N AESE+E +SDT++
Sbjct: 813 NKGSSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDD 872
Query: 2926 TAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAASAKKTGQG 3105
+ ++ ++KG++V+++LKGAGSSS A++ KK G+G
Sbjct: 873 -MDTANGDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRG 931
Query: 3106 S----AKRKR 3123
S AKRKR
Sbjct: 932 SGAAGAKRKR 941
Score = 75.9 bits (185), Expect = 1e-10
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +1
Query: 202 IARMQSDLRKWFMKQHDKGNGAPSKPALASEK-------PPSASQTEK--SGDQVGVTRR 354
+A +SD+RKWFMK+HD NG P KPA K P+ Q EK G Q RR
Sbjct: 1 MAASKSDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRR 60
Query: 355 KSSKYFDKDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKK 492
K+SKYF K + EKE E+LP + T++G +E + P PSKK
Sbjct: 61 KTSKYFQKPKD----EKEMEELPAKRKTQKG---TKESLNPPPSKK 99
>gb|EMJ00202.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
Length = 961
Score = 965 bits (2495), Expect = 0.0
Identities = 548/983 (55%), Positives = 643/983 (65%), Gaps = 12/983 (1%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKGNGAPSKPALASEKPPSASQTEKSGDQVGVTRRKSSKYFDKDQQK 390
M +D+RKWFMK HDKGNG KPA + + PS G Q RRK+SKYF D+ K
Sbjct: 1 MHADIRKWFMKSHDKGNG--KKPAPTTSQTPSTVH----GGQENPGRRKTSKYFTTDKPK 54
Query: 391 ATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVDV 570
A EKE E +P + T + D E VKPSP+KK H K K +VD
Sbjct: 55 A--EKETE-VPAKRKTHKEPD---ESVKPSPAKKVHKVVDDDDDFVLPHSK---KNSVDA 105
Query: 571 TANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 750
T +K+LK S V +K + E
Sbjct: 106 TPSKKLKSASGVGVPQKLTAIDEGGDNDVKDAESPHKPGGKGRGGRGTSAGPAGGRGTSA 165
Query: 751 XXXXXXX-------FMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAE 909
FMNFG+RKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAE
Sbjct: 166 GPAGGRGRGAGRGGFMNFGDRKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAE 225
Query: 910 DLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKS 1089
+LIKRHGGRITGSVSKKT+YLLCDEDIEGRKS+KAKELGT FLTEDGLFD+IRAS ++K
Sbjct: 226 ELIKRHGGRITGSVSKKTNYLLCDEDIEGRKSSKAKELGTAFLTEDGLFDMIRASIRAKV 285
Query: 1090 PARGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQ 1269
P + K D ++ +PK+SP K+ K ++ + S KQ + S AS + Q +
Sbjct: 286 PVQEAKKSVDDAAAAPLPKKSPNKVASK---SISLASSVSHKQ-LESDASHARRKKQPTE 341
Query: 1270 LATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--V 1443
+ TWT+KYRPK P D++GNQ++ KQLHDWL W +FL V
Sbjct: 342 HSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLVHWHEQFLDTGNKKKGKNPTNSSAKKAV 401
Query: 1444 LLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNE 1623
LLSGTPGIGKTTSAKLVS+MLGF+ IEVNASDSRGKA+S I KGIGGS ANSIKEL+SN+
Sbjct: 402 LLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSNANSIKELVSNK 461
Query: 1624 SLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKS 1803
+L+ + KH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKS
Sbjct: 462 ALSM--DGLKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPVICICNDRYSQKLKS 519
Query: 1804 LVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMS 1983
LVNYCL L+FRKPTKQQMAKRLMQIAN E L+VNEIALEELAE+ NGD+RMA+NQLQYMS
Sbjct: 520 LVNYCLLLSFRKPTKQQMAKRLMQIANAEGLKVNEIALEELAEKVNGDMRMAVNQLQYMS 579
Query: 1984 LSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLL 2163
LSMSVIKY+D+++RL SS+KDEDISPFTAVDKLFG+N GKLRMDER+DLSMSDPDLVPLL
Sbjct: 580 LSMSVIKYDDVRQRLLSSAKDEDISPFTAVDKLFGFNAGKLRMDERVDLSMSDPDLVPLL 639
Query: 2164 IQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXX 2343
IQENY+NY+PS KD+ G+KRMNL+A AAESI NGDI NVQIR+YR
Sbjct: 640 IQENYINYRPSSAVKDDSGIKRMNLIAHAAESIGNGDIFNVQIRKYRQWQLSQSACLSSS 699
Query: 2344 XXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXX 2523
G RE EQGERNFNRFGGWLGKNST GKN RLLEDLHVH+LASR S+
Sbjct: 700 IFPAALLRGQRETLEQGERNFNRFGGWLGKNSTLGKNSRLLEDLHVHLLASRESSSGRET 759
Query: 2524 XXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLD 2703
LPKDEAV KVV+FM+ YSI+Q+DFDTIVELSKF+G+PNPLD
Sbjct: 760 LRVEYLSLLLKRLTVPLRELPKDEAVHKVVDFMNTYSISQDDFDTIVELSKFQGHPNPLD 819
Query: 2704 GIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGL 2883
GIQPAVK+ALTKAYKEGS +R+V+ AD +TLPG LEP+ + + E+N
Sbjct: 820 GIQPAVKAALTKAYKEGSKTRMVRAADFVTLPGMKKAPKKRIAAILEPSVDVIGENNDDT 879
Query: 2884 GAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXX 3063
ESE+E +SDTE+ E +S + KGV VQ +LKGA +SS
Sbjct: 880 LVESEEENSSDTED-LEGSAAGEKLQQELQSLNTKGVHVQFDLKGATNSSAKKTPTGRGR 938
Query: 3064 XXSEAASAKKTGQGS---AKRKR 3123
S AA+ KK G+GS KRKR
Sbjct: 939 GGSSAAAEKKGGRGSGPGGKRKR 961
>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
Length = 933
Score = 957 bits (2473), Expect = 0.0
Identities = 508/790 (64%), Positives = 593/790 (75%), Gaps = 6/790 (0%)
Frame = +1
Query: 772 FMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRHGGRITGSV 951
FMNFGERKDPP+KG KEVPEG +DCLAGLTFV+SGTLDSLEREEAEDLIKRHGGR+TGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217
Query: 952 SKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDPKKTPDKTS 1131
SKKT++LLCDEDI G KSAKAKELGT FLTEDGLFD+I ASN +K+PARG+PKK+ DK
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277
Query: 1132 SAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTWTDKYRPKT 1311
A PK+SPQK+++K + V A A+ PK Q A+LTWT+KY+PK
Sbjct: 278 LATPKKSPQKVEKKGKRTVLA-------------ATTPKHIYQTIGHASLTWTEKYKPKV 324
Query: 1312 PTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTPGIGKTTSA 1485
P D++GNQ++ KQLH+WL+ W+ +FLH VLLSGTPGIGKTTSA
Sbjct: 325 PNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLLSGTPGIGKTTSA 384
Query: 1486 KLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGAERSKHQKT 1665
KLVS+MLGF+AIEVNASD+RGKAN+ I KGIGGS ANSIKEL+SNE+L A +RSKH KT
Sbjct: 385 KLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEALGAHMDRSKHPKT 444
Query: 1666 VLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCLPLNFRKPT 1845
VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL L+FRKPT
Sbjct: 445 VLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPT 504
Query: 1846 KQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVIKYEDIKKR 2025
KQQMAKRL+Q+AN E LQVNEIALEELAER NGD+RMA+NQLQYMSLSMSVIKY+D+++R
Sbjct: 505 KQQMAKRLLQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQR 564
Query: 2026 LQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYVNYKPSGVG 2205
L SS+KDEDISPF AVDKLFG+NGGKLRMDERIDLSMSDPDLVPLLIQENY+NY+P+ G
Sbjct: 565 LLSSAKDEDISPFVAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYINYRPTLAG 624
Query: 2206 KDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXXXHGSREIF 2385
KD++G+KRM+LLARAAESI +GDIINVQIRRYR HG RE
Sbjct: 625 KDDNGVKRMSLLARAAESIGDGDIINVQIRRYRQWQLSQAGSFASCITPAALLHGQRETL 684
Query: 2386 EQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXXXXXXXXXX 2565
EQGERNFNRFGGWLGKNST GKN RLLEDLHVH+LASR SN
Sbjct: 685 EQGERNFNRFGGWLGKNSTMGKNKRLLEDLHVHLLASRESNSGRGTLRIDYLTLILKRLT 744
Query: 2566 XXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAVKSALTKAY 2745
LPKD+AV+KVVEFMDLYSI+QEDFDTIVELSKF+G+P+PL+GIQPAVKSALTKAY
Sbjct: 745 DPLRMLPKDDAVQKVVEFMDLYSISQEDFDTIVELSKFQGHPSPLEGIQPAVKSALTKAY 804
Query: 2746 KEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESEDEVTSDTEN 2925
+GSSSRLV+ ADLITLPG LEP ++E+A +N AESE+E +SDT++
Sbjct: 805 NKGSSSRLVRAADLITLPGIKKAPKKRIAAILEPVDDELARENGDALAESEEENSSDTDD 864
Query: 2926 TAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAASAKKTGQG 3105
+ ++ ++KG++V+++LKGAGSSS A++ KK G+G
Sbjct: 865 -MDTANGDKKLPVDLQNLNSKGIKVELDLKGAGSSSAKKTPAGRGRGGGSASTEKKGGRG 923
Query: 3106 S----AKRKR 3123
S AKRKR
Sbjct: 924 SGAAGAKRKR 933
Score = 75.9 bits (185), Expect = 1e-10
Identities = 46/106 (43%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Frame = +1
Query: 202 IARMQSDLRKWFMKQHDKGNGAPSKPALASEK-------PPSASQTEK--SGDQVGVTRR 354
+A +SD+RKWFMK+HD NG P KPA K P+ Q EK G Q RR
Sbjct: 1 MAASKSDIRKWFMKKHDNDNGNPLKPAKPEPKASQSGKPSPATVQQEKPVHGGQESSCRR 60
Query: 355 KSSKYFDKDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKK 492
K+SKYF K + EKE E+LP + T++G +E + P PSKK
Sbjct: 61 KTSKYFQKPKD----EKEMEELPAKRKTQKG---TKESLNPPPSKK 99
>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
Length = 1047
Score = 956 bits (2470), Expect = 0.0
Identities = 539/994 (54%), Positives = 649/994 (65%), Gaps = 7/994 (0%)
Frame = +1
Query: 163 HLSISVTERKGLGIARMQSDLRKWFMKQHDKGNG-APSKPALASEKPPSASQTEKSGDQV 339
H+ ++ TE A QSD+RKWFMK H+KGNG + SKPA +++ P + G Q
Sbjct: 70 HVELNSTEEVDCADAMSQSDIRKWFMKSHEKGNGNSASKPAKSAQALP---EEPVQGSQD 126
Query: 340 GVTRRKSSKYFDKDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXX 519
RRK+SKYF ++ K EKE ++P + T+ E VKPSP+KK H
Sbjct: 127 NSGRRKTSKYFSAEKPKD--EKEMVEVPVKRKTQTDS---HEMVKPSPAKKIHKVDDDDD 181
Query: 520 XXXXXXXKRPGKKTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXX 699
++P V T K+LK S + +K D+ E
Sbjct: 182 FVLPNTKEKP----VASTPRKKLKSGSGRGTGQKPLDIDESDDGDDDEVKHVETPSKSGG 237
Query: 700 XXXXXXXXXXXXXXXXXXXXXXXX-FMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSG 876
FMNFGERKDPP+KG KEVPEG +DCLAGLTFV+SG
Sbjct: 238 RGRGGGRGASVAPSGGRGRGAGRGGFMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISG 297
Query: 877 TLDSLEREEAEDLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLF 1056
TLDSLEREEAEDLIK HGGR+TGSVSKKT+YLLCDEDIEGRKS KAKELGTPFL+EDGLF
Sbjct: 298 TLDSLEREEAEDLIKCHGGRVTGSVSKKTNYLLCDEDIEGRKSEKAKELGTPFLSEDGLF 357
Query: 1057 DIIRASNKSKSPARGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSA 1236
D+IRAS+++K + + KK+ D + K+S QKI+ K N A K +++ + A
Sbjct: 358 DMIRASSRAKP--KQESKKSVDDADVPISKKSMQKIELK-NCTGSAAPKDVASKSLAARA 414
Query: 1237 SRPKPNVQGGQLATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXX 1416
S + +Q + + LTWT+KY+PK D++GNQ++ KQLH WL+ W +FL
Sbjct: 415 SLDRKKIQTAEHSALTWTEKYKPKVTNDIIGNQSLVKQLHYWLANWHEQFLDAGSKKKGK 474
Query: 1417 XXXXXXXX--VLLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGST 1590
VLLSGTPGIGKTTSAKLVS+MLGF+ IEVNASDSRGKA++ I KGIGGS
Sbjct: 475 KANDPGVKKAVLLSGTPGIGKTTSAKLVSQMLGFQMIEVNASDSRGKADAKIEKGIGGSN 534
Query: 1591 ANSIKELISNESLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXX 1770
ANSIKEL+SNE+L+ + SKH KTVLIMDEVDGMSAGDRGG+ADL
Sbjct: 535 ANSIKELVSNEALSVNMDWSKHPKTVLIMDEVDGMSAGDRGGIADLISSIKISKIPIICI 594
Query: 1771 XNDRYSQKLKSLVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDI 1950
NDRYSQKLKSLVNYCL L+FRKPTKQQMAKRLMQ+AN E LQVNEIALEELAER +GD+
Sbjct: 595 CNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMQVANSEGLQVNEIALEELAERVSGDM 654
Query: 1951 RMAINQLQYMSLSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDL 2130
RMA+NQL YMSLSMSVIKY+D+++RL +S+KDEDISPFTAVDKLFG+N GKLRMDER+DL
Sbjct: 655 RMALNQLHYMSLSMSVIKYDDVRQRLLASAKDEDISPFTAVDKLFGFNAGKLRMDERMDL 714
Query: 2131 SMSDPDLVPLLIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXX 2310
SMSD DLVPLLIQENYVNY+PS VGKD++G+ RM+L+ARAAESI +GDI NVQIR+YR
Sbjct: 715 SMSDLDLVPLLIQENYVNYRPSSVGKDDNGISRMSLIARAAESIGDGDIFNVQIRKYRQW 774
Query: 2311 XXXXXXXXXXXXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVL 2490
HG R+I EQGERNFNRF GWLGKNST KN RLLEDLHVH+L
Sbjct: 775 QLSQSSALSSCIIPTALLHGQRQILEQGERNFNRFSGWLGKNSTFNKNMRLLEDLHVHLL 834
Query: 2491 ASRGSNXXXXXXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVEL 2670
ASR SN LPKD AV++VV+FM+ YSI+QEDFDTIVEL
Sbjct: 835 ASRESNSGRGTLRIEYLTLLLKRLTEPLRVLPKDGAVREVVDFMNTYSISQEDFDTIVEL 894
Query: 2671 SKFKGYPNPLDGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPA 2850
SKFKG P+PL GI AVK+ALT+AYKEGS SR+V+TAD +TLPG LEP+
Sbjct: 895 SKFKGRPDPLGGIASAVKAALTRAYKEGSKSRMVRTADFVTLPGIKKAPKKRIAAILEPS 954
Query: 2851 NEEVAEDNAGLGAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSS 3030
+E V E+N AE E+E SDTE+ E +S + KGVQV ++LK +G S
Sbjct: 955 DEGVGENNEEAAAEIEEENLSDTED-LEDSAAGEKLQKELQSLNKKGVQVHLDLKDSGKS 1013
Query: 3031 SXXXXXXXXXXXXSEAASAKKTGQG---SAKRKR 3123
S S AA K T +G SAKRKR
Sbjct: 1014 SAKKAPTGRGKGGSSAADKKTTARGSATSAKRKR 1047
>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
replication factor C subunit 1-like isoform X2 [Citrus
sinensis]
Length = 958
Score = 941 bits (2432), Expect = 0.0
Identities = 528/977 (54%), Positives = 641/977 (65%), Gaps = 6/977 (0%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKGNGAPSKPALASEKPPSASQTEKS-GDQVGVTRRKSSKYFDKDQQ 387
M D+RKWF+K H K + PA + + +E G + RRK+SKYF D+Q
Sbjct: 1 MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
K EKE+LP + K+ + V+ SP KK H K K +V
Sbjct: 61 KPEDGGEKEELPAKRKAKKDDG---KSVRSSPLKKFHKADDDDDDFVPPSVK---KNSVG 114
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
T +K+LK S +AV++K+ D+ +
Sbjct: 115 ATPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGRGGRGASGAPAVGRGRG 174
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG DCL GLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 175 GGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLGGLTFVISGTLDSLEREEAEDLIKRH 231
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+TGSVSKKT+YLLCDEDI G KS KAKELGTPFLTEDGLFD+IRAS K+ A+ +
Sbjct: 232 GGRVTGSVSKKTNYLLCDEDIAGAKSTKAKELGTPFLTEDGLFDMIRASKPMKALAQAES 291
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
KK+ +K ++++PK+SPQ I+ K A A + + + S A R N+Q ++LTW
Sbjct: 292 KKSVEKVAASLPKKSPQNIEAKSTSAPKAPIERM--KTVASPAKRKGQNIQQ---SSLTW 346
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPKTP ++VGNQ + KQLH WL+ W+ +FL +LSG+P
Sbjct: 347 TEKYRPKTPNEIVGNQQLVKQLHTWLAHWNEKFLDTGTKRNGKKQNDASAEKAAILSGSP 406
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
G+GKTT+AKLV +MLGF+AIEVNASDSRGKA++ I KGIGGS ANSIKEL+SNE+L+A
Sbjct: 407 GMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSANM 466
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
+RSKH KTVLIMDEVDGMSAGDRGG+ADL NDRYSQKLKSLVNYC
Sbjct: 467 DRSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCS 526
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L FRKP KQ++AKRLMQIAN E L+VNEIALEELA+R NGDIRMAINQLQYMSLS+SVI
Sbjct: 527 DLRFRKPRKQEIAKRLMQIANAEGLEVNEIALEELADRVNGDIRMAINQLQYMSLSLSVI 586
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
KY+DI++RL SS+KDEDISPFTAVDKLFG+NGGKLRMDERIDLSMSDPDLVPLLIQENY+
Sbjct: 587 KYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYI 646
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NY+PS G+DE +KR++L+ARAAESI++GDI NVQIRR +
Sbjct: 647 NYRPSSAGRDE--VKRLSLIARAAESISDGDIFNVQIRRNQQWQLSQSSSLASCIIPAAL 704
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG RE EQGERNFNRFGGWLGKNST GKN RLLEDLH H LASR S
Sbjct: 705 MHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHFHHLASRKSKLGRDTLRLDYF 764
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
LPKDEAVKKVVEFM+ YSI+QEDFD+IVELSKF+G+ NPL+GI PAV
Sbjct: 765 SLLLKQLTEPLRVLPKDEAVKKVVEFMNAYSISQEDFDSIVELSKFQGHANPLEGIPPAV 824
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
KSALT+AY S SR+V+ ADL+ LPG LEP ++ + E+N AE+E+
Sbjct: 825 KSALTRAYNAQSKSRMVQAADLVPLPGMKKAPKKRIAAMLEPPDDGIGEENGDNLAENEE 884
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E +SDTE +S +++G++VQ+ELKGAG+SS S +A
Sbjct: 885 ENSSDTE--GPDAMIGEKLQSELQSLNSEGIEVQLELKGAGNSSAKRKPAGRGKGGSTSA 942
Query: 3082 SAKKTGQGS---AKRKR 3123
KK+G+GS AKRKR
Sbjct: 943 E-KKSGRGSGTAAKRKR 958
>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
gi|550347876|gb|EEE82965.2| hypothetical protein
POPTR_0001s22140g [Populus trichocarpa]
Length = 981
Score = 941 bits (2431), Expect = 0.0
Identities = 536/999 (53%), Positives = 647/999 (64%), Gaps = 28/999 (2%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKGNGAPSKPALASEKPPSA---SQTEKSGDQVGVTRRKSSKYFDKD 381
MQ D+RKWFMK HDKGN + A +KPP ++T G Q G RRK+SKYF +
Sbjct: 1 MQRDIRKWFMKAHDKGND--NAATNAEKKPPPTEPKTETPVCGGQEGSGRRKTSKYFAAN 58
Query: 382 QQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKT 561
+QK +KE E LP + + G + VKP PSKK H K+
Sbjct: 59 KQKQKEDKEIEDLPAKRKAQNDGV---QSVKPPPSKKVHKVDDEEEDDDFSLPKKKN--- 112
Query: 562 VDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 741
D + +K+LK +S + +++K V+E
Sbjct: 113 -DASPSKKLKSSSGRGIAQKPVHVNESDEDDVKDTESPLKSGGRGRGGRGVSGAPSGGRG 171
Query: 742 XXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIK 921
FMNFGE+KDPP+KG KEVPEG +CLAGLTFV+SGTLDSLEREEAEDLIK
Sbjct: 172 RGGGRGG---FMNFGEKKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIK 228
Query: 922 RHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARG 1101
RHGGR+TGSVSKKTSYLLCDEDIEGRKS+KAKELGTPFLTEDGLFD I +S SK+PAR
Sbjct: 229 RHGGRVTGSVSKKTSYLLCDEDIEGRKSSKAKELGTPFLTEDGLFDKILSSKNSKAPARE 288
Query: 1102 DPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATL 1281
D K + +K +S +PK+SPQK D K + + ++ + + + + + K Q Q ++L
Sbjct: 289 DSKVSVEKVTS-LPKKSPQKADLKSSSLMS----NATHKDLGAGSQQAKQKDQAIQRSSL 343
Query: 1282 TWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRF--LHXXXXXXXXXXXXXXXXVLLSG 1455
WT+KYRPK P +M+GN ++ QLH+WL W+ +F VLLSG
Sbjct: 344 IWTEKYRPKVPNEMIGNPSLVTQLHNWLKNWNEQFHDTGNKGKGKKQNDSTAKKAVLLSG 403
Query: 1456 TPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNA 1635
PGIGKTTSAKLVSKMLGF+AIEVNASD+RGKA++ I KGI GS AN IKELISNE+L
Sbjct: 404 PPGIGKTTSAKLVSKMLGFQAIEVNASDNRGKADAKIFKGISGSNANCIKELISNEALGF 463
Query: 1636 GAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNY 1815
+RSKH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNY
Sbjct: 464 EMDRSKHLKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNY 523
Query: 1816 CLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMS 1995
CL L+FRKPTKQQMAKRL Q+AN E LQVNEIALEELAER NGD+RMA+NQLQYMSLSMS
Sbjct: 524 CLLLSFRKPTKQQMAKRLTQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMS 583
Query: 1996 VIKYEDIKKRLQSSSKDEDISPFTAVD----------KLFGYNGGKLRMDERIDLSMSDP 2145
VI Y+D+++RLQ S+KDEDISPFTAVD +LFG++GGKLRMDERIDLSMSDP
Sbjct: 584 VINYDDVRQRLQGSAKDEDISPFTAVDNMLLIVIFGVRLFGFSGGKLRMDERIDLSMSDP 643
Query: 2146 DLV--PLLIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXX 2319
DL ++ QENY+NY+PS +GKD++G+KRM+L+ARAAESIA+GDIINVQIRRYR
Sbjct: 644 DLEADSVIWQENYINYRPSSIGKDDNGMKRMSLIARAAESIADGDIINVQIRRYRQWQLS 703
Query: 2320 XXXXXXXXXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASR 2499
HGSRE EQGERNFNRFGGWLGKNST GKN RLLEDLHVH+LASR
Sbjct: 704 QTGSLSSCIIPAALLHGSRETLEQGERNFNRFGGWLGKNSTAGKNSRLLEDLHVHLLASR 763
Query: 2500 GSNXXXXXXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKF 2679
SN LPKDEAV+KVVEFM++YSI+QED DTIVELSKF
Sbjct: 764 ESNMGRETLRLDYLTVLLKQLTDPLRVLPKDEAVEKVVEFMNVYSISQEDMDTIVELSKF 823
Query: 2680 KGYPNPLDGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEE 2859
+G+ NPLDGI VK+ALT+AYKE SR+V+ ADL+TLPG LEP+++
Sbjct: 824 QGHGNPLDGIPSTVKAALTRAYKEERKSRMVRAADLVTLPGKKKAPKKRVAAILEPSDDG 883
Query: 2860 VAEDNAGLGAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXX 3039
+ E+N AESE+E +SDT++ E +S ++KG+QV+VELK SS
Sbjct: 884 LREENGDAVAESEEENSSDTDD-MEGTGNGEKLQSELQSLNSKGIQVEVELKCGKESSKS 942
Query: 3040 XXXXXXXXXXSEAASAKKT------GQGS-----AKRKR 3123
A++ KK G GS AKRKR
Sbjct: 943 KKTPTGRGKGGSASTEKKPAGRGRGGSGSSEKPGAKRKR 981
>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
gi|557525989|gb|ESR37295.1| hypothetical protein
CICLE_v10027762mg [Citrus clementina]
Length = 958
Score = 935 bits (2417), Expect = 0.0
Identities = 528/977 (54%), Positives = 638/977 (65%), Gaps = 6/977 (0%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKGNGAPSKPALASEKPPSASQTEKS-GDQVGVTRRKSSKYFDKDQQ 387
M D+RKWF+K H K + PA + + +E G + RRK+SKYF D+Q
Sbjct: 1 MPQDIRKWFLKPHSKDKDNATIPANTALSNLETTNSEPGCGGHESMGRRKTSKYFATDKQ 60
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
K EKE+LP + ++ + V+ SP KK H K K +V
Sbjct: 61 KPEDGGEKEELPAKRKAEKDDG---KSVRSSPLKKFHKADDDDDDFVPPSVK---KNSVG 114
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
T +K+LK S +AV++K+ D+ +
Sbjct: 115 ATPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGRGGRGASGAPAVGRGRG 174
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 175 GGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH 231
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+T SV KKT+YLLCDEDI G KS KAKELGTPFLTEDGLFD+IRAS K+ A+ +
Sbjct: 232 GGRVTESVPKKTNYLLCDEDIGGAKSTKAKELGTPFLTEDGLFDMIRASKPMKALAQAES 291
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
KK+ +K ++++PK+SPQ I+ K A A S + + S A R N+Q + LTW
Sbjct: 292 KKSVEKVAASLPKKSPQNIEAKSTSA--PKAPSERMKTVASPAKRKGQNIQQ---SLLTW 346
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPKTP ++VGNQ + KQLH WL+ W+ +FL LLSG+P
Sbjct: 347 TEKYRPKTPNEIVGNQQLVKQLHAWLAHWNEKFLDTGTKRNGKKQNDASAEKAALLSGSP 406
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
G+GKTT+AKLV +MLGF+AIEVNASDSRGKA++ I KGIGGS ANSIKEL+SNE+L+A
Sbjct: 407 GMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSNANSIKELVSNEALSANM 466
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
+RSKH KTVLIMDEVDGMSAGDRGG+ADL NDRYSQKLKSLVNYC
Sbjct: 467 DRSKHPKTVLIMDEVDGMSAGDRGGIADLIASIKISKIPIICICNDRYSQKLKSLVNYCS 526
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L FRKP KQ++AKRLMQIAN E L+VNEIALEELA+R NGDIRMAINQLQYMSLSMSVI
Sbjct: 527 DLRFRKPRKQEIAKRLMQIANAEGLEVNEIALEELADRVNGDIRMAINQLQYMSLSMSVI 586
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
KY+DI++RL SS+KDEDISPFTAVDKLFG+NGGKLRMDERIDLSMSDPDLVPLLIQENY+
Sbjct: 587 KYDDIRQRLLSSAKDEDISPFTAVDKLFGFNGGKLRMDERIDLSMSDPDLVPLLIQENYI 646
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NY+PS G+DE +KR++L+ARAAESI++GDI NVQIRR +
Sbjct: 647 NYRPSSAGRDE--VKRLSLIARAAESISDGDIFNVQIRRNQQWQLSQSSSLASCIIPAAL 704
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG RE EQGERNFNRFGGWLGKNST GKN RLLEDLH H LASR S
Sbjct: 705 MHGQRETLEQGERNFNRFGGWLGKNSTMGKNLRLLEDLHFHHLASRKSKLGRDTLRLDYF 764
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
LPKD AVKKVVEFM+ YSI+QEDFD+IVELSKF+G+ NPL+GI PAV
Sbjct: 765 SLLLKQLTEPLRVLPKDAAVKKVVEFMNAYSISQEDFDSIVELSKFQGHANPLEGIPPAV 824
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
KSALT+AY S SR+V+ ADL+ LPG LEP ++ + E+N AE+E+
Sbjct: 825 KSALTRAYNAQSKSRMVQAADLVPLPGMKKAPKKRIAAMLEPPDDGIGEENGDNLAENEE 884
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E +SDTE +S ++ G++VQ+ELKGAG+SS S A+
Sbjct: 885 ENSSDTE--GPDATNGEKLQSELQSLNSSGIEVQLELKGAGNSSAKRKPAGRGKGGS-AS 941
Query: 3082 SAKKTGQGS---AKRKR 3123
+ KK+G+GS AKRKR
Sbjct: 942 AEKKSGRGSGTAAKRKR 958
>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
gi|557101796|gb|ESQ42159.1| hypothetical protein
EUTSA_v10012587mg [Eutrema salsugineum]
Length = 962
Score = 929 bits (2402), Expect = 0.0
Identities = 534/981 (54%), Positives = 639/981 (65%), Gaps = 12/981 (1%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNG-APSKPALASEKPPSASQT------EKSGDQVGVTRRKSSKYFD 375
SD+RKWFMK H+KGNG AP++ + SA++T + S DQ RRK+SKYF
Sbjct: 2 SDIRKWFMKAHEKGNGSAPNRLLSKAVAVTSAAETASIKSEQASEDQESAARRKTSKYFG 61
Query: 376 KDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGK 555
KD+ A EKE ++P + K D+L + +P + K +
Sbjct: 62 KDKTIAKDEKEVGEIPAKRKLKTDSDDLGKS-RPRKAIKVDDDDDDFEVPN-------SR 113
Query: 556 KTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 735
KT D T +K+LK S + V+ K D+ E
Sbjct: 114 KTRDSTPSKKLKSGSGRGVTSKAVDIDEDDDGEDAQEKETPLKSGGRGRGGRAASGASTG 173
Query: 736 XXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDL 915
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDL
Sbjct: 174 GRGRGGGRGG--FMNFGERKDPPHKGEKEVPEGNPDCLAGLTFVISGTLDSLEREEAEDL 231
Query: 916 IKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPA 1095
IKRHGGR+TGSVSKKT+YLLCDEDI GRKS KAKELGT FLTEDGLFD+IR+S K
Sbjct: 232 IKRHGGRVTGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSL 291
Query: 1096 RGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLA 1275
K +K S+ + K SPQK ++ + + V + + V +S A K +Q
Sbjct: 292 PERTNKGTEKVSAQL-KISPQK-EETRGKLVAKISPNKVPPH-SSPAKAKKKIIQ----T 344
Query: 1276 TLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRF--LHXXXXXXXXXXXXXXXXVLL 1449
+L WT+KYRPK P ++VGNQ++ QLH+WLS W +F VL+
Sbjct: 345 SLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGAKKAVLM 404
Query: 1450 SGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESL 1629
SGTPGIGKTTSAKLVS+MLGF+A+EVNASDSRGKANSNI KGIGGS AN++KEL++NE++
Sbjct: 405 SGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAI 464
Query: 1630 NAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLV 1809
A +RSKH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLV
Sbjct: 465 AANIDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLV 524
Query: 1810 NYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLS 1989
NYCLPLNFRKPTKQQMAKRL IA E L+VNEIALEELAER NGDIR+A+NQLQYMSLS
Sbjct: 525 NYCLPLNFRKPTKQQMAKRLTHIAKAEGLEVNEIALEELAERVNGDIRLALNQLQYMSLS 584
Query: 1990 MSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQ 2169
MSVIKY+DI++RL SS+KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSD DLVPLL+Q
Sbjct: 585 MSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDFDLVPLLVQ 644
Query: 2170 ENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXX 2349
ENY+NY+PS GKDE KRM LLARAAESIA+GDIINVQIRR+R
Sbjct: 645 ENYLNYRPSSTGKDE--AKRMELLARAAESIADGDIINVQIRRHRQWQLSLSSCVASSIL 702
Query: 2350 XXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXX 2529
HGSRE+ EQGERNFNRFGGWLGKNST GKN RLLEDLHVHVLASR S+
Sbjct: 703 PASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNTRLLEDLHVHVLASRESSSGRETIR 762
Query: 2530 XXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGI 2709
+LPKDEAV +VVEFM+ YSI+QEDFDTI+EL+KFKG NPL+G+
Sbjct: 763 VDYLPLLLNRLTSPLQTLPKDEAVSEVVEFMNSYSISQEDFDTIMELAKFKGRANPLEGV 822
Query: 2710 QPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGA 2889
PAVKSALTK Y E + +R+V+ AD++ LPG LEP+ E + +++ L A
Sbjct: 823 PPAVKSALTKKYNETNKTRMVRAADMVQLPGMKKAPKKRIAAMLEPSVESLKDEDGELLA 882
Query: 2890 ESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSS--XXXXXXXXXX 3063
E+E+E SD E++ E N A+G+QV+V++KGAGSS
Sbjct: 883 ENEEENESDAEDSEEATDGEKLESNLKNLN-ARGIQVEVDVKGAGSSGLRKAAGKGRGRG 941
Query: 3064 XXSEAASAKKTGQGS-AKRKR 3123
++A+ K G+GS AKRKR
Sbjct: 942 KAADASEKKAAGRGSGAKRKR 962
>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
Full=Replication factor C subunit 1; Short=AtRFC1;
AltName: Full=Activator 1 large subunit; AltName:
Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
replication factor C large subunit-like protein
[Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
At5g22010 [Arabidopsis thaliana]
gi|332005585|gb|AED92968.1| replication factor C1
[Arabidopsis thaliana]
Length = 956
Score = 928 bits (2399), Expect = 0.0
Identities = 533/985 (54%), Positives = 630/985 (63%), Gaps = 16/985 (1%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPALASEKP-PSASQT------EKSGDQVGVTRRKSSKYFD 375
SD+RKWFMK H+KGNG+ K + P +A++T + S D RRK+SKYF
Sbjct: 2 SDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASEDLETADRRKTSKYFG 61
Query: 376 KDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGK 555
KD+ K EKE E +P + K D+L VKP P K +
Sbjct: 62 KDKTKVKDEKEVEAIPAKRKLKTESDDL---VKPRPRKVTKVVDDDDDDFDVPI----SR 114
Query: 556 KTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 735
KT D T +K+LK S + ++ KT D +
Sbjct: 115 KTRDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDKETPLKSAGRGRGGRAAPGASTGGRG 174
Query: 736 XXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDL 915
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDL
Sbjct: 175 RGGGRGG-----FMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLEREEAEDL 229
Query: 916 IKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPA 1095
IKRHGGRITGSVSKKT+YLLCDEDI GRKS KAKELGT FLTEDGLFDIIR+S K
Sbjct: 230 IKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDIIRSSKPVKKSL 289
Query: 1096 RGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQL- 1272
K +K A PK SPQK + + AKSS K+ P +G
Sbjct: 290 PERSNKGTEKIC-APPKTSPQKEETRGKPL----AKSSPKKV---------PPAKGKNKI 335
Query: 1273 --ATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRF--LHXXXXXXXXXXXXXXXX 1440
+L WT+KYRPK P ++VGNQ++ QLH+WLS W +F
Sbjct: 336 IETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGSKKA 395
Query: 1441 VLLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISN 1620
VLLSGTPGIGKTTSAKLVS+MLGF+A+EVNASDSRGKANSNI KGIGGS ANS+KEL++N
Sbjct: 396 VLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANSVKELVNN 455
Query: 1621 ESLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLK 1800
E++ A +RSKH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLK
Sbjct: 456 EAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLK 515
Query: 1801 SLVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYM 1980
SLVNYCLPLN+RKPTKQQMAKRLM IA E L++NEIALEELAER NGDIR+A+NQLQYM
Sbjct: 516 SLVNYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYM 575
Query: 1981 SLSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPL 2160
SLSMSVIKY+DI++RL SS+KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPL
Sbjct: 576 SLSMSVIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPL 635
Query: 2161 LIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXX 2340
LIQENY+NY+PSG +D KRM+LLARAAESIA+GDIINVQIRRYR
Sbjct: 636 LIQENYLNYRPSG----KDEAKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVAS 691
Query: 2341 XXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXX 2520
HGSRE+ EQGERNFNRFGGWLGKNST GKN RL+EDLHVHVLASR S+
Sbjct: 692 SILPASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRE 751
Query: 2521 XXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPL 2700
+LPKDEAV +VV+FM+ YSI+QEDFDTI+EL KFKG NP+
Sbjct: 752 TLRVDYLPLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPM 811
Query: 2701 DGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAG 2880
+G+ P VK+ALTK Y E + +R+V+ AD++ LPG LEP + + +++
Sbjct: 812 EGVPPPVKAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGE 871
Query: 2881 LGAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXX 3060
A++E+ SD E +E ++ +A+G+QV+++LKGAGSS
Sbjct: 872 PLADNEEGNGSDAEEDSEEATDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGR 931
Query: 3061 XXXSEA---ASAKKTGQGS-AKRKR 3123
A A K TG+GS AKRKR
Sbjct: 932 GRGKAADTSAEKKATGRGSGAKRKR 956
>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
Length = 938
Score = 928 bits (2398), Expect = 0.0
Identities = 530/977 (54%), Positives = 627/977 (64%), Gaps = 9/977 (0%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPS-KPALASEKPPSASQTEKSGDQVGVTRRKSSKYFDKDQQKA 393
SD+RKWFMK HDKGN A S KP+ S+KP S +G Q RR +SKYF+ ++QK
Sbjct: 2 SDIRKWFMKTHDKGNNAASSKPS--SDKPQSEKTV--AGGQESSGRRITSKYFNSNKQKG 57
Query: 394 TLEKEKEQLPTPKTTKRGGDNLREEVKPS---PSKKAHXXXXXXXXXXXXXXKRPGKKTV 564
EKEK++LP + + + + E+ P+ K KK
Sbjct: 58 KDEKEKQELPAKRKNAKDSEEIHEDDGDDSVLPTNK--------------------KKLA 97
Query: 565 DVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 744
D T K+LK S + + +K+ V E
Sbjct: 98 DTTPTKKLKSGSGRGIPKKSA-VLEESDEDDDKDAVSAAKSAGRGGGGGGRGAPGRSTGG 156
Query: 745 XXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKR 924
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKR
Sbjct: 157 RGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKR 216
Query: 925 HGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGD 1104
HGGR+TGSVSKKT+YLLCDEDI GRKS KAKELGT FLTEDGLFD+IRAS +K+ ++ D
Sbjct: 217 HGGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQED 276
Query: 1105 PKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLT 1284
K + AV S K+ K V ++S KQA +A+ VQ +
Sbjct: 277 KKLV----NKAVAVASQSKVSPKSQVKVPLSSRSPSKQAKPKTAT----TVQSSSM---- 324
Query: 1285 WTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGT 1458
WT+KYRPK P D++GNQ++ QL +WL W+ FL VLLSGT
Sbjct: 325 WTEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGT 384
Query: 1459 PGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAG 1638
PGIGKTTSAKLV + LGF+AIEVNASDSRGKA+S I KGI GS NS+KEL++NE++
Sbjct: 385 PGIGKTTSAKLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGVN 444
Query: 1639 AERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYC 1818
ERSKH K+VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYC
Sbjct: 445 MERSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYC 504
Query: 1819 LPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSV 1998
L L+FRKPTKQQMAKRLM ++ E+LQVNEIALEELAER NGD+RMA+NQLQYMSLSMSV
Sbjct: 505 LLLSFRKPTKQQMAKRLMDVSKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSV 564
Query: 1999 IKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENY 2178
I Y+DI++R +++KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSDPDLVPL+IQENY
Sbjct: 565 INYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENY 624
Query: 2179 VNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXX 2358
+NY+PS GKD+ G+KRMNL+ARAAESIA+GDI+NVQIRRYR
Sbjct: 625 INYRPSLAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSLATSIIPAS 684
Query: 2359 XXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXX 2538
HG REI EQGERNFNRFGGWLGKNST GKN RLL+DLHVH+LASR S+
Sbjct: 685 LLHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEY 744
Query: 2539 XXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPA 2718
+LPK EAV++VVE M+ YSI+QEDFDTIVELSKFKG+PNPLDGIQPA
Sbjct: 745 LTLLLKEMTEPLRTLPKAEAVQQVVELMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPA 804
Query: 2719 VKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESE 2898
VKSALTKAYKE SSSR+V+ ADLITLPG LEPA EEV + ESE
Sbjct: 805 VKSALTKAYKEQSSSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDTLDESE 864
Query: 2899 DEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEA 3078
+E +SD E +S ++K Q+Q+ELKG G+SS S
Sbjct: 865 EENSSDNEEL--EGTKGEKLQSELQSYNSKATQIQLELKGTGNSSSKKTSGGRGKGAS-- 920
Query: 3079 ASAKKTGQG---SAKRK 3120
AS KK Q +AKRK
Sbjct: 921 ASGKKVAQAPKTTAKRK 937
>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
gi|482555714|gb|EOA19906.1| hypothetical protein
CARUB_v10000156mg [Capsella rubella]
Length = 953
Score = 928 bits (2398), Expect = 0.0
Identities = 532/981 (54%), Positives = 638/981 (65%), Gaps = 12/981 (1%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPA----LASEKPPSASQTEKSGDQVGVTRRKSSKYFDKDQ 384
SD+RKWFMK HDKGNG+ K A+E P + + S D RRK+SKYF KD+
Sbjct: 2 SDIRKWFMKAHDKGNGSAPKSTGAVKNAAETAPIKPE-QASEDLDTAARRKTSKYFGKDK 60
Query: 385 QKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTV 564
K EKE E+LP + K D+L + +P K +KT
Sbjct: 61 TKVKDEKEVEELPAKRKLKTESDDL-SKARPRKVTKVDDDDDDFDVPI-------SRKTR 112
Query: 565 DVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 744
D T +K+LK S + ++ KT + E
Sbjct: 113 DSTPSKKLKSGSGRGIASKTVEKDEDDDGEDAHEKETPLKSGGRGRGGRAASGASTGGRG 172
Query: 745 XXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKR 924
FMNFGERKDPP+KG KEVPEG DCLAG+TFV+SGTLDSLEREEAEDLIKR
Sbjct: 173 RGGGRGG--FMNFGERKDPPHKGEKEVPEGTPDCLAGVTFVISGTLDSLEREEAEDLIKR 230
Query: 925 HGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGD 1104
HGGRITGSVSKKT+YLLCDEDI G+KS KAKELGT FLTEDGLFD+IR+S K
Sbjct: 231 HGGRITGSVSKKTTYLLCDEDIGGKKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSLPER 290
Query: 1105 PKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQL--AT 1278
K +K A PK SPQK ++ + + V AK S +A P +G ++ +
Sbjct: 291 TNKGTEKVC-APPKISPQK-EETRGKPV---AKISPTKA---------PPAKGKKIIETS 336
Query: 1279 LTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRF--LHXXXXXXXXXXXXXXXXVLLS 1452
L WT+KYRPK P ++VGNQ++ Q+H+WLS W +F +LLS
Sbjct: 337 LPWTEKYRPKVPNEIVGNQSLVTQIHNWLSHWHDQFGGTGSKGKGKKVNDAGARKAILLS 396
Query: 1453 GTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLN 1632
GTPGIGKTTSAKLVSKMLGF+A+EVNASDSRGKANSNI KGIGGS AN++KEL++NE++
Sbjct: 397 GTPGIGKTTSAKLVSKMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAMA 456
Query: 1633 AGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVN 1812
A +RSKH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVN
Sbjct: 457 ANLDRSKHLKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVN 516
Query: 1813 YCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSM 1992
YCLPLNFRKPTKQQMAKRLM IA VE L+VNEIALEELAER NGDIR+A+NQLQYMSLSM
Sbjct: 517 YCLPLNFRKPTKQQMAKRLMHIAKVEGLEVNEIALEELAERVNGDIRLAVNQLQYMSLSM 576
Query: 1993 SVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQE 2172
SVIKY+DI++RL SS+KDED+SPFTAVDKLF YNGGKLRMDERIDLSMSDPDLVPLLIQE
Sbjct: 577 SVIKYDDIRQRLLSSAKDEDMSPFTAVDKLFSYNGGKLRMDERIDLSMSDPDLVPLLIQE 636
Query: 2173 NYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXX 2352
NY+NY+P+G +D KRM LLARAAESIA+GDIINVQIRRYR
Sbjct: 637 NYLNYRPAG----KDETKRMELLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILP 692
Query: 2353 XXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXX 2532
HGSREIFEQGERNFNRFGGWLGKNST GKN RL+EDLHVHVLASR S+
Sbjct: 693 ASLLHGSREIFEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSSGRETLRV 752
Query: 2533 XXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQ 2712
+LPKDEAV +VV+FM+ YSI+QEDFDTI+EL KFKG+ NP++G+
Sbjct: 753 DYLPLLRNRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTIMELGKFKGHENPMEGVP 812
Query: 2713 PAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAE 2892
P VK+ALTK Y E + +R+V+ AD++ LPG LEP + + +++ AE
Sbjct: 813 PPVKAALTKKYNETNKTRMVRVADMVQLPGMKKAPKKRIAAMLEPTVDSLRDEDGEPLAE 872
Query: 2893 SEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSS--XXXXXXXXXXX 3066
+E+E SD E +E ++ +A+G+QV+++LKGAGSS
Sbjct: 873 NEEENASDAEEDSEEANDGEKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGRGRGRGK 932
Query: 3067 XSEAASAKK-TGQGS-AKRKR 3123
+EA++ KK TG+GS AKRKR
Sbjct: 933 TAEASTEKKATGRGSGAKRKR 953
>gb|ESW04506.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
Length = 938
Score = 927 bits (2397), Expect = 0.0
Identities = 529/974 (54%), Positives = 630/974 (64%), Gaps = 5/974 (0%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGA-PSKPALASEKPPSASQTEKS--GDQVGVTRRKSSKYFDKDQQ 387
SD+RKWFMK HDKGN A PSKP+ + Q EK+ G Q RR +SKYF+ ++Q
Sbjct: 2 SDIRKWFMKSHDKGNNAAPSKPSNQPKPSSDKPQPEKNVAGGQESSGRRVTSKYFNTNKQ 61
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
K EKE ++LP + + ++ P P K+ H KK +
Sbjct: 62 KVKEEKETQELPAKRKNVKDSEDT-----PEP-KRVHEDVGDDSVLPTNK-----KKLAE 110
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
T K+LK S + + +K+ + E
Sbjct: 111 ATPTKKLKSGSGRGIPKKSVVLEESDEDDDKGAVSAVKSAGRGGGGRGAPGRGRGGGRGG 170
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG +CLAGLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 171 --------FMNFGERKDPPHKGEKEVPEGAPNCLAGLTFVISGTLDSLEREEAEDLIKRH 222
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+TGSVSKKT+YLLCDEDI GRKS KAKELGT FLTEDGLFD+IRAS +KSP++ +
Sbjct: 223 GGRVTGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKSPSQAE- 281
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
KK +K + PK SP+ + + V ++S KQA +A+ + +V W
Sbjct: 282 KKPVNKAVAVAPKVSPKPLVK-----VPLSSRSPSKQAKPVAATTIESSVM--------W 328
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPK P D++GNQ++ QL +WL W+ +F VLLSGTP
Sbjct: 329 TEKYRPKDPKDIIGNQSLIVQLRNWLKAWNEQFSDTGNKKKGKKQNDSVLKKAVLLSGTP 388
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
GIGKTTSAKLV + LGF+AIEVNASDSRGKA+S I KGI GS NS+KEL++NES+ A
Sbjct: 389 GIGKTTSAKLVCEQLGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNESIGANM 448
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
ERSK K+VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL
Sbjct: 449 ERSKISKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 508
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L+FRKPTKQQMAKRLM +A E LQVNEIALEELAER NGD+RMA+NQLQYMSLSMSVI
Sbjct: 509 LLSFRKPTKQQMAKRLMDVAKAEGLQVNEIALEELAERVNGDVRMAVNQLQYMSLSMSVI 568
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
Y+DI++R +++KDEDISPFTAVDKLFG+N GKLRMDERI+LSMSDPDLVPLLIQENY+
Sbjct: 569 NYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLRMDERINLSMSDPDLVPLLIQENYI 628
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NYKPS GKD++G+KRMNL+ARAAESIA+GDI+NVQIRRYR
Sbjct: 629 NYKPSLAGKDDNGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQASCTATCIIPASL 688
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG REI EQGERNFNRFGGWLGKNST GKN+RLL+DLHVH+LASR S+
Sbjct: 689 LHGQREILEQGERNFNRFGGWLGKNSTMGKNFRLLDDLHVHILASRESSSGRDTIRMEYL 748
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
+LPK EAV++VVEFM+ YSI+QEDFDTIVELSKFKG+PNPLDGIQPA+
Sbjct: 749 TLILKRLTEPLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAI 808
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
KSALTKAYKE S SR+V+ AD ITLPG LEPA E + +SE+
Sbjct: 809 KSALTKAYKEQSKSRVVRVADQITLPGVKKAPKKRIAAILEPAEEGGEKGEGDTSDQSEE 868
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E TSDTE E +S ++K +VQ+ELKG G+SS S
Sbjct: 869 ENTSDTEE-LEGIAKGEKLQSDLQSWNSKATEVQLELKGTGNSSAKKASGGRGKAAS--T 925
Query: 3082 SAKKTGQGSAKRKR 3123
S KK Q + KRKR
Sbjct: 926 SGKKAAQ-APKRKR 938
>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 981
Score = 927 bits (2396), Expect = 0.0
Identities = 537/999 (53%), Positives = 636/999 (63%), Gaps = 31/999 (3%)
Frame = +1
Query: 220 DLRKWFMKQHDKGNGAPSK---PALAS-EKPPSASQTEKSGDQVGVTRRKSSKYFDKDQQ 387
D+RKWFMK HDK NG+ SK PA +S EK SA +T SG + R+ +SKYF ++Q
Sbjct: 3 DIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGE-SAGRQITSKYFASEKQ 61
Query: 388 KATLEKEKEQLP----TPKTTKRGGDNLR------EEVKPSPSKKAHXXXXXXXXXXXXX 537
+A +E E LP +P+ TK + E K SP KK++
Sbjct: 62 EAKDAEETEVLPIIRKSPRDTKESPAKRKFQKYNEESPKASPLKKSNKVDDNDDDAVLSS 121
Query: 538 XKRPGKKTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXX 717
K K +VT NK+LK S K +++K ++
Sbjct: 122 SK---KNMSEVTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGKGSS 178
Query: 718 XXXXXXXXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLER 897
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLER
Sbjct: 179 AATIGGRGRGGGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER 235
Query: 898 EEAEDLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASN 1077
EEAEDLIKRHGGR+TGSVSKKT+YLLCDEDI GRKS+KAKELGT FLTEDGLFD+IRAS
Sbjct: 236 EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG 295
Query: 1078 KSKSPARGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNV 1257
K K+P R DPKK+ K+ + K++ QK+ K ++ + A A + +++ T+
Sbjct: 296 K-KAPPRQDPKKSVVKSEESPTKKNFQKVQAKSHKDLAAGASPAKQKSGTA--------- 345
Query: 1258 QGGQLATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXX 1437
+ + LTWT+KYRPK P D++GNQ++ KQLHDWL+ W+ FL
Sbjct: 346 ---EFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGA 402
Query: 1438 X--VLLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKEL 1611
VLL G PGIGKTTSAKLVS+MLGFEAIEVNASD+RGK+++ I KGIGGS ANSIKEL
Sbjct: 403 KKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKEL 462
Query: 1612 ISNESLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQ 1791
ISNESL+ + KH KTVLIMDEVDGMSAGDRGGVADL NDRYSQ
Sbjct: 463 ISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQ 522
Query: 1792 KLKSLVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQL 1971
KLKSLVNYCL L+FRKPTKQQMAKRL+Q+AN E LQVNEIALEELAER NGD+RMA+NQL
Sbjct: 523 KLKSLVNYCLILSFRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQL 582
Query: 1972 QYMSLSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDL 2151
QY+SLSMSVIKY+DI++RL SS KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DL
Sbjct: 583 QYLSLSMSVIKYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDL 642
Query: 2152 VPLLIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXX 2331
VPLLIQENY+NY+PS V KD+ G+KRM+L+ARAAESIA+GDIINVQIRR+R
Sbjct: 643 VPLLIQENYINYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSC 702
Query: 2332 XXXXXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNX 2511
HG RE EQ ERNFNRFG WLGKNST GKN RLLEDLHVH+LASR S
Sbjct: 703 VASCIIPASLLHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCS 762
Query: 2512 XXXXXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYP 2691
+LPKDEAVK VVEFM LYSI+QEDFDT++ELSKF+G
Sbjct: 763 GREHLRVENLTLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRK 822
Query: 2692 NPLDGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAED 2871
NPLDG+ PAVK+ALTKAYKE S + +V+ ADLI LPG LEP + V
Sbjct: 823 NPLDGVAPAVKAALTKAYKEASKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGA 882
Query: 2872 NAGLGAESEDEVTSDTENTA------------EXXXXXXXXXXXXESNHAKGVQVQVELK 3015
ES+DE + D E E +S + KG+QVQ++LK
Sbjct: 883 GGETLVESDDENSVDNEGEGVSLTHSFLFAIIENSTNGQKLQLELQSLNKKGMQVQLDLK 942
Query: 3016 GAGSSSXXXXXXXXXXXXSEAASAKKTGQGS---AKRKR 3123
G SS + AS KK G+GS KRKR
Sbjct: 943 GVEDSSAKKSGGRGKGGRTSQASEKKGGRGSGSATKRKR 981
>ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Glycine
max]
Length = 949
Score = 926 bits (2392), Expect = 0.0
Identities = 527/977 (53%), Positives = 623/977 (63%), Gaps = 8/977 (0%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPALASEKPPSAS-QTEKS--GDQVGVTRRKSSKYFDKDQQ 387
SD+RKWFMK HDKGN A S KP S Q+EK+ G Q RR +SKYF+ ++Q
Sbjct: 2 SDIRKWFMKTHDKGNNAASSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQ 61
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
K +KE ++LP + + + + P P KK H KK D
Sbjct: 62 KGKDKKEMQELPAKRKNMKDSEEI-----PEP-KKIHEDDGDDSVLPTNK-----KKLAD 110
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
T K+LK S + + +K+ + E
Sbjct: 111 TTPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTSGRGRG 170
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 171 GGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH 227
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+TGSVSKKT+YLLCDEDI GRKS KAK+LGT FLTEDGLFD+IR S +K+P++ D
Sbjct: 228 GGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQEDK 287
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
K + AV S K+ K V ++S QA KP ++L W
Sbjct: 288 KPV----NKAVAVASQSKVSPKSQVKVPLSSRSPSNQA--------KPKTATTVQSSLMW 335
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPK P D++GNQ++ QL +WL W+ FL VLLSGTP
Sbjct: 336 TEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTP 395
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
GIGKTTSA LV + LGF+AIEVNASDSRGKA+S I KGI GS NS+KEL++NE++
Sbjct: 396 GIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGINM 455
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
RSKH K+VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL
Sbjct: 456 GRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 515
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L+FRKPTKQQMAKRLM +A E+LQVNEIALEELAER NGD+RMA+NQLQYMSLSMS+I
Sbjct: 516 LLSFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSII 575
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
Y+DI++R +++KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSDPDLVPL+IQENY+
Sbjct: 576 NYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYI 635
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NY+PS GKD+ G+KRMNL+ARAAESIA+GDI+NVQIRRYR
Sbjct: 636 NYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVATSIIPASL 695
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG REI EQGERNFNRFGGWLGKNST GKN RLL+DLHVH+LASR S+
Sbjct: 696 LHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYL 755
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
+LPK EAV++VVEFM+ YSI+QEDFDTIVELSKFKG+PNPLDGIQPAV
Sbjct: 756 TLLLKQMTETLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAV 815
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
KSALTK YKE S+SR+V+ ADLITLPG LEPA EEV + ESE+
Sbjct: 816 KSALTKEYKEQSTSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDALDESEE 875
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E +SDTE E +S ++K QVQ+ELKG G+SS S
Sbjct: 876 ENSSDTEE-LEGTTKGEKLQSELQSLNSKATQVQLELKGTGNSSSKKTSGGRGKGVS--V 932
Query: 3082 SAKKTGQG---SAKRKR 3123
S KK Q +AKRKR
Sbjct: 933 SGKKVAQAPKTTAKRKR 949
>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
max]
Length = 947
Score = 923 bits (2386), Expect = 0.0
Identities = 526/977 (53%), Positives = 624/977 (63%), Gaps = 8/977 (0%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPALASEKPPSAS-QTEKS--GDQVGVTRRKSSKYFDKDQQ 387
SD+RKWFMK HDKGN A S KP S Q+EK+ G Q RR +SKYF+ ++Q
Sbjct: 2 SDIRKWFMKTHDKGNNAASSKPSNQPKPSSDKPQSEKTVAGGQESSGRRITSKYFNSNKQ 61
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
K +KE ++LP + + + + P P KK H KK D
Sbjct: 62 KGKDKKEMQELPAKRKNMKDSEEI-----PEP-KKIHEDDGDDSVLPTNK-----KKLAD 110
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
T K+LK S + + +K+ + E
Sbjct: 111 TTPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAGRGDGGRGAPGRSTSGRGRG 170
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 171 GGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH 227
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+TGSVSKKT+YLLCDEDI GRKS KAK+LGT FLTEDGLFD+IR S +K+P++ D
Sbjct: 228 GGRVTGSVSKKTNYLLCDEDIGGRKSEKAKQLGTSFLTEDGLFDMIRGSKPAKAPSQEDK 287
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
K + AV S K+ K S V + S +++ KP ++L W
Sbjct: 288 KPV----NKAVAVASQSKVSPK----------SQVPLSSRSPSNQAKPKTATTVQSSLMW 333
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPK P D++GNQ++ QL +WL W+ FL VLLSGTP
Sbjct: 334 TEKYRPKDPKDIIGNQSLVLQLRNWLKAWNEHFLDTGNKKQGKKQNDSGLKKAVLLSGTP 393
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
GIGKTTSA LV + LGF+AIEVNASDSRGKA+S I KGI GS NS+KEL++NE++
Sbjct: 394 GIGKTTSATLVCQELGFQAIEVNASDSRGKADSKIEKGISGSKTNSVKELVTNEAIGINM 453
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
RSKH K+VLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL
Sbjct: 454 GRSKHYKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCL 513
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L+FRKPTKQQMAKRLM +A E+LQVNEIALEELAER NGD+RMA+NQLQYMSLSMS+I
Sbjct: 514 LLSFRKPTKQQMAKRLMDVAKAERLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSII 573
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
Y+DI++R +++KDEDISPFTAVDKLFG+N GKL+MDERI+LSMSDPDLVPL+IQENY+
Sbjct: 574 NYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLIIQENYI 633
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NY+PS GKD+ G+KRMNL+ARAAESIA+GDI+NVQIRRYR
Sbjct: 634 NYRPSMAGKDDSGIKRMNLIARAAESIADGDIVNVQIRRYRQWQLSQTSSVATSIIPASL 693
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG REI EQGERNFNRFGGWLGKNST GKN RLL+DLHVH+LASR S+
Sbjct: 694 LHGQREILEQGERNFNRFGGWLGKNSTMGKNLRLLDDLHVHILASRESSSGRDTIRMEYL 753
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
+LPK EAV++VVEFM+ YSI+QEDFDTIVELSKFKG+PNPLDGIQPAV
Sbjct: 754 TLLLKQMTETLRTLPKAEAVQQVVEFMNTYSISQEDFDTIVELSKFKGHPNPLDGIQPAV 813
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
KSALTK YKE S+SR+V+ ADLITLPG LEPA EEV + ESE+
Sbjct: 814 KSALTKEYKEQSTSRVVRVADLITLPGVKKVPKKRIAAILEPAGEEVEKGEGDALDESEE 873
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E +SDTE E +S ++K QVQ+ELKG G+SS S
Sbjct: 874 ENSSDTEE-LEGTTKGEKLQSELQSLNSKATQVQLELKGTGNSSSKKTSGGRGKGVS--V 930
Query: 3082 SAKKTGQG---SAKRKR 3123
S KK Q +AKRKR
Sbjct: 931 SGKKVAQAPKTTAKRKR 947
>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
Length = 942
Score = 923 bits (2386), Expect = 0.0
Identities = 530/977 (54%), Positives = 623/977 (63%), Gaps = 9/977 (0%)
Frame = +1
Query: 220 DLRKWFMKQHDKGNGAPSK---PALAS-EKPPSASQTEKSGDQVGVTRRKSSKYFDKDQQ 387
D+RKWFMK HDK NG+ SK PA +S EK SA +T SG + R+ +SKYF ++Q
Sbjct: 3 DIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSASAGKTGPSGGE-SAGRQITSKYFASEKQ 61
Query: 388 KATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGKKTVD 567
+A +E E+ P + ++ + E K SP KK++ K K +
Sbjct: 62 EAKDAEETEESPAKRKFQKYNE---ESPKASPLKKSNKVDDNDDDAVLSSSK---KNMSE 115
Query: 568 VTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 747
VT NK+LK S K +++K ++
Sbjct: 116 VTPNKKLKSGSGKGITQKPVEIEASDDEETKGTDSSLKPSGRGRGGKGSSAATIGGRGRG 175
Query: 748 XXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDLIKRH 927
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDLIKRH
Sbjct: 176 GGRGG---FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRH 232
Query: 928 GGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPARGDP 1107
GGR+TGSVSKKT+YLLCDEDI GRKS+KAKELGT FLTEDGLFD+IRAS K K+P R DP
Sbjct: 233 GGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGK-KAPPRQDP 291
Query: 1108 KKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLATLTW 1287
KK+ K+ + K++ QK+ K + + LTW
Sbjct: 292 KKSVVKSEESPTKKNFQKVQAKSKSGT-------------------------AEFSNLTW 326
Query: 1288 TDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXXXXXXXXX--VLLSGTP 1461
T+KYRPK P D++GNQ++ KQLHDWL+ W+ FL VLL G P
Sbjct: 327 TEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGP 386
Query: 1462 GIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESLNAGA 1641
GIGKTTSAKLVS+MLGFEAIEVNASD+RGK+++ I KGIGGS ANSIKELISNESL+
Sbjct: 387 GIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKM 446
Query: 1642 ERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLVNYCL 1821
+ KH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLVNYCL
Sbjct: 447 NQPKHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCL 506
Query: 1822 PLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLSMSVI 2001
L+FRKPTKQQMAKRL+Q+AN E LQVNEIALEELAER NGD+RMA+NQLQY+SLSMSVI
Sbjct: 507 ILSFRKPTKQQMAKRLVQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVI 566
Query: 2002 KYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYV 2181
KY+DI++RL SS KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPLLIQENY+
Sbjct: 567 KYDDIRQRLLSSKKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYI 626
Query: 2182 NYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXXXXXX 2361
NY+PS V KD+ G+KRM+L+ARAAESIA+GDIINVQIRR+R
Sbjct: 627 NYRPSAVSKDDTGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCVASCIIPASL 686
Query: 2362 XHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXXXXXX 2541
HG RE EQ ERNFNRFG WLGKNST GKN RLLEDLHVH+LASR S
Sbjct: 687 LHGQRETLEQYERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENL 746
Query: 2542 XXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGIQPAV 2721
+LPKDEAVK VVEFM LYSI+QEDFDT++ELSKF+G NPLDG+ PAV
Sbjct: 747 TLFLKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAV 806
Query: 2722 KSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGAESED 2901
K+ALTKAYKE S + +V+ ADLI LPG LEP + V ES+D
Sbjct: 807 KAALTKAYKEASKTHMVRAADLIALPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDD 866
Query: 2902 EVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXXSEAA 3081
E + D E E +S + KG+QVQ++LKG SS + A
Sbjct: 867 ENSVDNEG-EENSTNGQKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGKGGRTSQA 925
Query: 3082 SAKKTGQGS---AKRKR 3123
S KK G+GS KRKR
Sbjct: 926 SEKKGGRGSGSATKRKR 942
>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319877|gb|EFH50299.1| AAA-type ATPase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 960
Score = 922 bits (2384), Expect = 0.0
Identities = 529/982 (53%), Positives = 628/982 (63%), Gaps = 13/982 (1%)
Frame = +1
Query: 217 SDLRKWFMKQHDKGNGAPSKPALASEKPP-SASQT------EKSGDQVGVTRRKSSKYFD 375
SD+RKWFMK H+KGN + K + P +A++T + S D RRK+SK+F
Sbjct: 2 SDIRKWFMKAHEKGNASAPKSTSSKAGPARNAAETAPLKSEQASEDLETAARRKTSKFFG 61
Query: 376 KDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXXXXXXXXKRPGK 555
KD+ K EKE E++P + K D+L KP P K R
Sbjct: 62 KDKTKVKDEKEVEEIPAKRKLKTDSDDL---AKPRPRKVTKVVDDDDDDDFDVPISR--- 115
Query: 556 KTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 735
KT D T +K+LK S + ++ KT D E
Sbjct: 116 KTRDSTPSKKLKSGSGRGIASKTVDNDEDDDGEDAQDKETPLKAAGRGRGGRAAPGASTG 175
Query: 736 XXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTLDSLEREEAEDL 915
FMNFGERKDPP+KG KEVPEG DCLAGLTFV+SGTLDSLEREEAEDL
Sbjct: 176 GRGRGGGRGG--FMNFGERKDPPHKGEKEVPEGTPDCLAGLTFVISGTLDSLEREEAEDL 233
Query: 916 IKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDIIRASNKSKSPA 1095
IKRHGGRITGSVSKKT+YLLCDEDI GRKS KAKELGT FLTEDGLFD+IR+S K
Sbjct: 234 IKRHGGRITGSVSKKTTYLLCDEDIGGRKSEKAKELGTKFLTEDGLFDMIRSSKPVKKSL 293
Query: 1096 RGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSASRPKPNVQGGQLA 1275
K +K A PK SPQK + + AKSS + A K ++
Sbjct: 294 PERTNKGTEKIC-APPKTSPQKEETRGKPL----AKSSPNKV--PPAKGKKKIIE----T 342
Query: 1276 TLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRF--LHXXXXXXXXXXXXXXXXVLL 1449
+L WT+KYRPK P ++VGNQ++ QLH+WLS W +F VLL
Sbjct: 343 SLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKLNDAGAKKAVLL 402
Query: 1450 SGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTANSIKELISNESL 1629
SGTPGIGKTTSAKLVS+MLGF+A+EVNASDSRGKANSNI KGIGGS AN++KEL++NE++
Sbjct: 403 SGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNANTVKELVNNEAM 462
Query: 1630 NAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXXNDRYSQKLKSLV 1809
A +RSKH KTVLIMDEVDGMSAGDRGGVADL NDRYSQKLKSLV
Sbjct: 463 AANLDRSKHPKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLV 522
Query: 1810 NYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIRMAINQLQYMSLS 1989
NYCLPLN+RKPTKQQMAKRLM IA E L++NEIALEELAER NGDIR+A+NQLQYMSLS
Sbjct: 523 NYCLPLNYRKPTKQQMAKRLMHIAKAEGLEINEIALEELAERVNGDIRLALNQLQYMSLS 582
Query: 1990 MSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQ 2169
MS IKY+DI++RL SS+KDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQ
Sbjct: 583 MSAIKYDDIRQRLLSSAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQ 642
Query: 2170 ENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXXXXXXXXXXXXXX 2349
ENY+NY+PSG +D KRM+LLA AAESIA+GDIINVQIRRYR
Sbjct: 643 ENYLNYRPSG----KDEAKRMDLLALAAESIADGDIINVQIRRYRQWQLSQSCCVASSIL 698
Query: 2350 XXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLASRGSNXXXXXXX 2529
HGSRE+ EQGERNFNRFGGWLGKNST GKN RL+EDLHVHVLASR S+
Sbjct: 699 PASLLHGSREVLEQGERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLR 758
Query: 2530 XXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELSKFKGYPNPLDGI 2709
+LPKDEAV +VV+FM+ YSI+QEDFDTI+EL KFKG NPL+G+
Sbjct: 759 VDYLSLLLSRLTSPLQTLPKDEAVSEVVDFMNSYSISQEDFDTIMELGKFKGRENPLEGV 818
Query: 2710 QPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPANEEVAEDNAGLGA 2889
P VK+ALTK Y E + +R+V+ AD++ LPG LEP + + +++ A
Sbjct: 819 PPPVKAALTKKYNEMNKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLA 878
Query: 2890 ESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSSXXXXXXXXXXXX 3069
++E+E SD E +E ++ +A+G+QV+++LKGAGSS
Sbjct: 879 DNEEENGSDAEEDSEEATDGQKLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRG 938
Query: 3070 SEA---ASAKKTGQGS-AKRKR 3123
A A K TG+GS AKRKR
Sbjct: 939 KAADASAEKKATGRGSGAKRKR 960
>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
Length = 989
Score = 922 bits (2383), Expect = 0.0
Identities = 514/996 (51%), Positives = 627/996 (62%), Gaps = 25/996 (2%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKGNGA----PSKPALASEKPPSASQTEK--------SGDQVGVTRR 354
M SD+RKWFMK DKG + PS PA A +K P S EK S D RR
Sbjct: 1 MSSDIRKWFMKTQDKGGASGAVKPSGPAAAEKKKPVLSIPEKKQAPPSLASCDHDPSARR 60
Query: 355 KSSKYFDKDQQK--------ATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXX 510
K+SKYF +K AT K E+ + ++G + L+++ KP P+KK
Sbjct: 61 KTSKYFGSKTEKDSDVEMADATAGKSTEKNAAKRKLQKGSNELKDDTKPLPAKKMSKDDE 120
Query: 511 XXXXXXXXXXKRPGKKTVDVTANKRLK-DNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXX 687
K+ K V +K+ K +++ +A R T ++
Sbjct: 121 DDNDDFVSPSKK--KTPVKPPPSKKPKVESNVEAPGRTTG--TDDGEEEDKMDEDAKTPS 176
Query: 688 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFV 867
FMNFGERKDPP+KG KEVPEG DCL+GLTFV
Sbjct: 177 KGAGRGRGRGGRGGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFV 236
Query: 868 VSGTLDSLEREEAEDLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTED 1047
+SGTLDSLEREEA DLIKR+GGR+TGS+SKKTSYLL DEDI G KS KAK+LG PFLTED
Sbjct: 237 ISGTLDSLEREEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTED 296
Query: 1048 GLFDIIRASNKSKSPARGDPKKT-PDKTSSAVPKRSPQKIDQKKNQA-VDADAKSSVKQA 1221
GLFD+IR S +K+P G +K K SP K++++ + V S A
Sbjct: 297 GLFDLIRKSKPAKAPVDGHQSSNGSEKLQKLQTKSSPAKVEKRAEASPVGKSFASKSNVA 356
Query: 1222 ITSSASRPKPNVQGGQLATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXX 1401
S+ +R N+ G ++ WT+KYRPK P D+VGNQ++ KQLHDWL WD +FLH
Sbjct: 357 NASAENRKAKNIDRG---SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLHSGQ 413
Query: 1402 XXXXXXXXXXXXX--VLLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKG 1575
VLLSG PGIGKTT+AK+VS+MLG +AIEVNASDSRGKA+S I KG
Sbjct: 414 KGKGKKQADNGAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKG 473
Query: 1576 IGGSTANSIKELISNESLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXX 1755
+GGST+NS+KELISN +LN R KH K VLIMDEVDGMSAGDRGGVADL
Sbjct: 474 VGGSTSNSVKELISNATLNYSDNRLKHPKAVLIMDEVDGMSAGDRGGVADLIASIKISKI 533
Query: 1756 XXXXXXNDRYSQKLKSLVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAER 1935
NDRYSQKLKSLVNYCL LNFRKPTKQQM+KRLM+IA E +Q E A+EELAER
Sbjct: 534 PIICICNDRYSQKLKSLVNYCLMLNFRKPTKQQMSKRLMEIAKKEGIQAQENAMEELAER 593
Query: 1936 SNGDIRMAINQLQYMSLSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMD 2115
+GDIRMA+N LQYMSLS SV+KY+DI++RL SS+KDEDISPFTAVDKLFG+NGG+LRMD
Sbjct: 594 VHGDIRMALNHLQYMSLSQSVVKYDDIRERLNSSAKDEDISPFTAVDKLFGFNGGRLRMD 653
Query: 2116 ERIDLSMSDPDLVPLLIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIR 2295
ERID MSDPDLVPL+IQENY+NY+P+ +GKDE G+KRMN LARAAESIA+GD++NVQIR
Sbjct: 654 ERIDFGMSDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIR 713
Query: 2296 RYRXXXXXXXXXXXXXXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDL 2475
RYR HG+REI E GERNFNRFGGWLGK STT KN RLLED
Sbjct: 714 RYRQWQLSQAACFASSIVPAAFMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDA 773
Query: 2476 HVHVLASRGSNXXXXXXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFD 2655
H H+LAS+ +N ++PKDEAV+KVVEFMD YS++QEDFD
Sbjct: 774 HSHILASQQANLDRETLRLDYLTLLLRQLTDPLKTMPKDEAVQKVVEFMDTYSLSQEDFD 833
Query: 2656 TIVELSKFKGYPNPLDGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXX 2835
TIVE+SKFKG+P+P+DGIQPAVKSALTKAYK+GSSSR+V+ ADLI +PG
Sbjct: 834 TIVEISKFKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAA 893
Query: 2836 XLEPANEEVAEDNAGLGAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELK 3015
LEP E +A++N AE+++E +SDTEN E +S+ KG+QVQ++LK
Sbjct: 894 ILEPVEESLADENGVASAEADEEDSSDTENNDELVPSDSMPKLDLQSDKKKGIQVQLDLK 953
Query: 3016 GAGSSSXXXXXXXXXXXXSEAASAKKTGQGSAKRKR 3123
G+ S + + K G + KRKR
Sbjct: 954 SNGNGSSGKKTPASRSRAAPGSGGKSAGGSAGKRKR 989
>tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea mays]
Length = 985
Score = 910 bits (2353), Expect = 0.0
Identities = 508/991 (51%), Positives = 618/991 (62%), Gaps = 20/991 (2%)
Frame = +1
Query: 211 MQSDLRKWFMKQHDKG---NGAPSKPA-LASEKPPSASQTEK--------SGDQVGVTRR 354
M SD+RKWFMK DK +GA KP+ A+EK P S EK S D RR
Sbjct: 1 MSSDIRKWFMKPQDKSAAASGAAGKPSGSAAEKKPVLSIPEKKSAPPALASCDHDTSARR 60
Query: 355 KSSKYF----DKDQQKATLEKEKEQLPTPKTTKRGGDNLREEVKPSPSKKAHXXXXXXXX 522
K+SKYF +KD + + + ++ D ++E+ KP P+KK
Sbjct: 61 KTSKYFGSKAEKDSDVQMADASGGKSAAKRKLQKCNDEVKEDSKPFPAKKMFDDEEDDDF 120
Query: 523 XXXXXXKRPGKKTVDVTANKRLKDNSAKAVSRKTEDVSEXXXXXXXXXXXXXXXXXXXXX 702
K P K +K+LK S KT V +
Sbjct: 121 VAPAKKKTPVKPP----PSKKLKVESNVEAPAKTTGVDDAEDEDRMDEDAKTPSKGAGRG 176
Query: 703 XXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPNKGTKEVPEGVADCLAGLTFVVSGTL 882
FMNFGERKDPP+KG KEVPEG DCL+GLTFV+SGTL
Sbjct: 177 RGRGGRGGAGAAPGGRGRGGGRGFMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTL 236
Query: 883 DSLEREEAEDLIKRHGGRITGSVSKKTSYLLCDEDIEGRKSAKAKELGTPFLTEDGLFDI 1062
DSLEREEA DLIKR+GGR+TGS+SKKTSYLL DEDI G KS KAK+LG PFLTEDGLFD+
Sbjct: 237 DSLEREEATDLIKRYGGRVTGSISKKTSYLLADEDIGGVKSNKAKDLGVPFLTEDGLFDL 296
Query: 1063 IRASNKSKSPA-RGDPKKTPDKTSSAVPKRSPQKIDQKKNQAVDADAKSSVKQAITSSAS 1239
IR S +K+P + + +K + K SP K++++ + + +S A ++SA
Sbjct: 297 IRKSKPAKAPVDKRQNNNSSEKLQKSQTKSSPAKVEKRAEASAVGKSIASNSNAASASAD 356
Query: 1240 RPKPNVQGGQLATLTWTDKYRPKTPTDMVGNQAIFKQLHDWLSQWDGRFLHXXXXXXXXX 1419
+ KP + ++ WT+KYRPK P D+VGNQ++ KQLHDWL WD FLH
Sbjct: 357 KQKPKIV--DRGSMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDALFLHSGQKGKGKK 414
Query: 1420 XXXXXXX--VLLSGTPGIGKTTSAKLVSKMLGFEAIEVNASDSRGKANSNIVKGIGGSTA 1593
VLLSG PGIGKTT+AK+VS+MLG +AIEVNASDSRGKA+S I KG+GGST+
Sbjct: 415 QTDSAAKKAVLLSGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTS 474
Query: 1594 NSIKELISNESLNAGAERSKHQKTVLIMDEVDGMSAGDRGGVADLXXXXXXXXXXXXXXX 1773
NSIKELI+N +LN R KH K VL+MDEVDGMSAGDRGGVADL
Sbjct: 475 NSIKELINNATLNYSDNRLKHPKAVLVMDEVDGMSAGDRGGVADLIASIKISKIPIICIC 534
Query: 1774 NDRYSQKLKSLVNYCLPLNFRKPTKQQMAKRLMQIANVEKLQVNEIALEELAERSNGDIR 1953
NDRYSQKLK+LVNYCL LNFRKPTKQQM KRLM+IA E +Q E A+EELAER +GDIR
Sbjct: 535 NDRYSQKLKNLVNYCLMLNFRKPTKQQMGKRLMEIAKKEGIQAQENAMEELAERVHGDIR 594
Query: 1954 MAINQLQYMSLSMSVIKYEDIKKRLQSSSKDEDISPFTAVDKLFGYNGGKLRMDERIDLS 2133
MA+N LQYMSLS SV+KY+DIK+RL SSSKDEDISPFTAVDKLFG+NGG+LRMDER+D
Sbjct: 595 MALNHLQYMSLSQSVVKYDDIKERLNSSSKDEDISPFTAVDKLFGFNGGRLRMDERMDFG 654
Query: 2134 MSDPDLVPLLIQENYVNYKPSGVGKDEDGLKRMNLLARAAESIANGDIINVQIRRYRXXX 2313
MSDPDLVPL+IQENY+NY+P+ +GKDE G+KRMN LARAAESIA+GD++NVQIRRYR
Sbjct: 655 MSDPDLVPLIIQENYINYRPNTIGKDESGVKRMNALARAAESIADGDLVNVQIRRYRQWQ 714
Query: 2314 XXXXXXXXXXXXXXXXXHGSREIFEQGERNFNRFGGWLGKNSTTGKNYRLLEDLHVHVLA 2493
HG+REI E GERNFNRFGGWLGK STT KN RLLED+H H+LA
Sbjct: 715 LSQAACFASSIVPAALMHGNREILEAGERNFNRFGGWLGKYSTTNKNRRLLEDVHSHILA 774
Query: 2494 SRGSNXXXXXXXXXXXXXXXXXXXXXXXSLPKDEAVKKVVEFMDLYSINQEDFDTIVELS 2673
S+ +N + KDEAV+KVVEFMD YS++QEDFDTIVE+S
Sbjct: 775 SQQANLDRDALRLDYLTLILRELTDPLKKMSKDEAVQKVVEFMDTYSLSQEDFDTIVEVS 834
Query: 2674 KFKGYPNPLDGIQPAVKSALTKAYKEGSSSRLVKTADLITLPGXXXXXXXXXXXXLEPAN 2853
KFKG+P+P+DGIQPAVKSALTKAYK+GSSSR+V+ ADLI +PG LEP
Sbjct: 835 KFKGHPSPMDGIQPAVKSALTKAYKQGSSSRVVRAADLINIPGMKKPLKKRVAAILEPVE 894
Query: 2854 EEVAEDNAGLGAESEDEVTSDTENTAEXXXXXXXXXXXXESNHAKGVQVQVELKGAGSSS 3033
E + E+N AE +++ +SD EN E +S+ KG+QVQ++LK G
Sbjct: 895 ESLPEENGLASAEDDEDGSSDAENNDELVPADSTPKLDLQSDKKKGIQVQLDLKSNGDGP 954
Query: 3034 XXXXXXXXXXXXSEAASAKKTGQGSA-KRKR 3123
+ + G GSA KRKR
Sbjct: 955 RGKKAPAARSRATGSGGKAAAGGGSAGKRKR 985