BLASTX nr result

ID: Rheum21_contig00001703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00001703
         (2580 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein...   642   0.0  
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   631   e-178
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   623   e-175
ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   620   e-174
gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus pe...   616   e-173
ref|XP_002332503.1| predicted protein [Populus trichocarpa]           613   e-173
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   609   e-171
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             604   e-170
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   600   e-169
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              600   e-168
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   593   e-167
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   583   e-163
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   554   e-155
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   553   e-154
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   553   e-154
ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associa...   545   e-152
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   543   e-151
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   543   e-151
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   541   e-151
ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chlorop...   533   e-148

>gb|EOY30694.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
            [Theobroma cacao]
          Length = 767

 Score =  642 bits (1656), Expect = 0.0
 Identities = 350/773 (45%), Positives = 460/773 (59%), Gaps = 32/773 (4%)
 Frame = +2

Query: 233  FPIFAPPAQYXXXXXXXXXX----EVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQ 400
            FPIFAPP                 E+RFSRWNNANAEKFN++QR  +EIEDD+RR+RR+ 
Sbjct: 9    FPIFAPPLPNPYPNPNEPAHRPPTEIRFSRWNNANAEKFNQRQRAQQEIEDDIRRYRRFD 68

Query: 401  SALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNH 580
            SA  IA            +                            P  KS +S   NH
Sbjct: 69   SATKIAITIDPSSASPRPTETYKSLGSPSSPSNPSI-----------PGKKSKYSKPPNH 117

Query: 581  PAFRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLALR 760
            PAFRK      P       + +P ++ +   G+S+V+ GAPFE+ YSYTETPK KP+ LR
Sbjct: 118  PAFRKFSKTANPPPPTPLDK-KPANVSIGDDGISFVIDGAPFEFKYSYTETPKVKPIKLR 176

Query: 761  EPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSGP 937
            EPP +PFGP TMPRPWTGR           EFDSF  PP +KKG+KP+Q+PGP+LPG+GP
Sbjct: 177  EPPYSPFGPSTMPRPWTGRAPLPPSKKKMKEFDSFVLPPPNKKGVKPIQKPGPYLPGTGP 236

Query: 938  KYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCKI 1117
            +YV SR                     KS RQLNMGRDGLTHNMLDNIH+HWKRRRVCKI
Sbjct: 237  RYVQSREEILGEPLNAEEVKELVNGCLKSKRQLNMGRDGLTHNMLDNIHAHWKRRRVCKI 296

Query: 1118 KCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSPV 1297
            KCKGVCTVDMDNVC+QLEE+TGGK+IYRRGG +FLFRGRNYNY+TRP+FPLMLWKPV+P+
Sbjct: 297  KCKGVCTVDMDNVCEQLEERTGGKVIYRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPM 356

Query: 1298 YPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRIDC 1477
            YPRL+++ P+GLT++E SEMR+KGR L+PICKLAKNGVY DLV +VREAFE CELVR++C
Sbjct: 357  YPRLIQKAPEGLTVEEMSEMRKKGRKLMPICKLAKNGVYSDLVKNVREAFEECELVRVNC 416

Query: 1478 QGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSF---DVNASGNAESTINX 1648
            +G+  SDY+KIG KLK+LVPCVLISFENE IL+WRGR W+SSF     N+        N 
Sbjct: 417  EGIKGSDYRKIGAKLKELVPCVLISFENESILMWRGRNWKSSFLKPAFNSGVEERDAENA 476

Query: 1649 XXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDN---------TESSPL 1801
                                  ++    +  + + + E S  +D           +   +
Sbjct: 477  TSILGQLEGQELSPVCVQAGYTDQPLMISQEISIEQRESSVEKDRPNAVLDAKPAKMETI 536

Query: 1802 LSAEQEISAENADSSITGNTS-----------SSIEEDEESVAFGNKGDVSNTGPYAQDD 1948
             S    I   N +S    NTS           +S E +  S  +  +  + N G   ++ 
Sbjct: 537  ESTLDRIDYANDESESKRNTSGGATFFGDIKCASSESETMSKTYSPEPILDNPGIENEEP 596

Query: 1949 THISPAVSVF--TLEGTQSTNDGQIVSSTDGETLDPI--NTHQSSGPADLEQPYMQEVLL 2116
              +     V   + E T S ++  ++ S + + L+ +   +   +GPA    P  + VLL
Sbjct: 597  VALPLESDVMPRSSENTLSQSESSVMDSLNLDQLEDVAQASQDINGPARKTAPCTERVLL 656

Query: 2117 LLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEE 2296
             ++QAVESG+A+V D+  +DAD++YER+V+ AR +P GPVFRH+P+KV + K+  QE   
Sbjct: 657  FMKQAVESGSAVVLDDATLDADIIYERAVAFARSAPPGPVFRHQPRKVAVQKNGKQEPAN 716

Query: 2297 DRVQEAVPVADRKPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
              V+E   V ++   E   SK  T+++K +   +  + P+GSLGVDE+AKLLA
Sbjct: 717  LEVKELKAVPNKGGNEKQASK--TQRIKYIDERHLDIVPRGSLGVDELAKLLA 767


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            tuberosum]
          Length = 764

 Score =  631 bits (1627), Expect = e-178
 Identities = 356/778 (45%), Positives = 458/778 (58%), Gaps = 33/778 (4%)
 Frame = +2

Query: 221  TVTPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQ 400
            T+  FPIF+PPA            E+RFSRWNNANAEKF R +R  KEIED++R H+R+ 
Sbjct: 5    TLIQFPIFSPPAP---PHSHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFD 61

Query: 401  SALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATN- 577
            S L+IA                                         P  KS +S     
Sbjct: 62   SVLNIANNYNPAPPSPVTEKTFKSVGTPSTPSSPSI-----------PGKKSKYSRNFQN 110

Query: 578  -----HPAFRK-VRTRPIPTKEAAE-GEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETP 736
                 HPAF+  VRTR IP + A E      +DI+V + GV Y  P APF Y YSYTETP
Sbjct: 111  NPRQIHPAFKPLVRTRKIPDETADETARKSAIDIKVDENGVCYEFPEAPFVYQYSYTETP 170

Query: 737  KAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKPVQRPG 913
            K KP  LREP ++PFGP++M RPWTGR           EFDSF  PP  KKG+KPVQ PG
Sbjct: 171  KLKPKKLREPLVSPFGPESMQRPWTGRKPLPPSKKKRPEFDSFQLPPPHKKGVKPVQAPG 230

Query: 914  PFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHW 1093
            PFL GSGPKYV SR                    +K++RQ+N+GRDGLTHNML+NIH+HW
Sbjct: 231  PFLAGSGPKYVKSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHW 290

Query: 1094 KRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLM 1273
            KR+RVCKIKCKGVCTVDMDNVC++LEEKTGGKIIY +GG ++LFRGRNYNY+TRP+FPLM
Sbjct: 291  KRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLM 350

Query: 1274 LWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEA 1453
            LW+PV+PVYPRLV+R+P+GLTL+EA+ MR+KGR+LIPICKLAKNGVY DLV +VREAFEA
Sbjct: 351  LWRPVTPVYPRLVQRVPEGLTLEEATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEA 410

Query: 1454 CELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAE 1633
            CELV I+CQG+NPSDY+KIG KLKDLVPCVLISFE EHIL+WRGR+W SS   +   +++
Sbjct: 411  CELVSINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILMWRGRDWVSSLPEDRDNDSD 470

Query: 1634 STINXXXXXXXXXXXXXXXXXXXXXXXNESSEANL---TLMVGREEGSQLEDNTESSPLL 1804
               N                        E +  NL   T  +G EE   +  +       
Sbjct: 471  KAAN--TNRSLEVQVVASTSGSPRLPITEMNTCNLSANTFPLGEEESEYVRRDGTKEDRS 528

Query: 1805 SAEQEISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAV--SVF 1978
                  S+  A   +   T++ I E E  + +   GD  +      D       +  SV 
Sbjct: 529  EDHYLESSNKAPLDVCSVTTTGISESEIPLVYA--GDTGDNSRILSDCRECKTRLDDSVV 586

Query: 1979 TLEGTQSTNDGQIVSSTDGETLDP----------INTHQSSGPADLEQPYMQEVLLLLRQ 2128
              E    +    + +  D  +L P          ++T+Q+        P  + +LLL +Q
Sbjct: 587  DTENELESASDDVENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLLWKQ 646

Query: 2129 AVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEEDRV- 2305
            A+ESG+A++ D+  +DAD+VY+R+V+L+  +PAGPVF+H+PKKV + +   +E  +  V 
Sbjct: 647  AIESGSAVLLDDSSIDADIVYQRAVALSTSAPAGPVFQHQPKKVSVQRRGEEEIGDLEVG 706

Query: 2306 --QEAVPVADRKP------KEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
              +   P + RK       K  S + T   KLKG+  +Y +V PKGSLGVDE+AKLLA
Sbjct: 707  CTKLDTPASSRKETAVSGRKVNSTTSTRKEKLKGIREDYLNVVPKGSLGVDELAKLLA 764


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
            gi|223524018|gb|EEF27274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 748

 Score =  623 bits (1607), Expect = e-175
 Identities = 356/765 (46%), Positives = 460/765 (60%), Gaps = 24/765 (3%)
 Frame = +2

Query: 233  FPIFAPPAQ---YXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQS 403
            FP+F+PP                ++ FSRWNNANA +FN ++R  KEIE+D+RR+RR+ S
Sbjct: 10   FPVFSPPLNPNLLSQTQHHRPPSDIHFSRWNNANAREFNDRRRAQKEIEEDIRRNRRFNS 69

Query: 404  ALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKS----PFSMA 571
            A +I                                          P  KS    P S  
Sbjct: 70   AANIIDNYDSATSNENFKSKSIGTPSSPSAPSI-------------PGRKSKYSKPESPT 116

Query: 572  TNHPAFR---KVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKA 742
            ++HPAFR   K+  +P+P K          D+++ + G+S+VV GAPFE+ YSYTETPKA
Sbjct: 117  SHHPAFRSISKITKKPLPEKPIDRNA----DVKLSEDGLSFVVDGAPFEFKYSYTETPKA 172

Query: 743  KPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPF 919
            KP+ LRE P +PFGP TM RPWTGR           EFDSF  PP  KKG+KPVQ+PGPF
Sbjct: 173  KPIKLREAPFSPFGPTTMGRPWTGRAPLPPSKKKLREFDSFKLPPPDKKGVKPVQKPGPF 232

Query: 920  LPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKR 1099
            LPG+GP+YV+SR                     K+ RQLNMGRDGLTHNMLDNIH+HWKR
Sbjct: 233  LPGAGPRYVYSREEILGEPLTTEEVKILIEGCLKTRRQLNMGRDGLTHNMLDNIHAHWKR 292

Query: 1100 RRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLW 1279
            RRVCKIKC GVCTVDMDNVCQQLEE+TGGK+IYR+GG V+LFRGRNYNYRTRP+FPLMLW
Sbjct: 293  RRVCKIKCMGVCTVDMDNVCQQLEERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLMLW 352

Query: 1280 KPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACE 1459
            KPV+PVYPRL+KR P+GLTL+EASEMRRKGR LIPICKLAKNGVY +LV +VREAFE CE
Sbjct: 353  KPVTPVYPRLIKRAPEGLTLEEASEMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEECE 412

Query: 1460 LVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAEST 1639
            LVRIDCQG+N SDY+K+G KLK+LVPC+LISFE+EHIL+WRGR+W+SS     + + E+ 
Sbjct: 413  LVRIDCQGVNGSDYRKVGAKLKELVPCLLISFEHEHILMWRGRDWKSSMIKPVNDSVEAI 472

Query: 1640 INXXXXXXXXXXXXXXXXXXXXXXXNESSEANL-TLMVG-----REEGSQLEDNTESSPL 1801
             +                       +  S+ ++ T+ VG      E  S L+  + +   
Sbjct: 473  GSDVNSATSIASVLEDQIMEIVSHEDGLSKPDMSTIPVGSMDEQAEHPSILDGTSVAIGA 532

Query: 1802 LSAEQEISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFT 1981
             S   E+S  N  +  +G++S+  E +  + A G++  V+N  P       +  A+SV +
Sbjct: 533  SSTTVEMSEINPMTE-SGSSSAVSESEVINNAVGSESVVNNMDP----ANEMPVAMSVSS 587

Query: 1982 LEGTQSTNDGQIVSSTDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFD 2161
                +S    + +     E  D +N      PA+L   Y   VLLL +QAVESG+A++  
Sbjct: 588  ETVLESVGSKKELHDVSIECSDDVNK-----PANLSVSYADRVLLLWKQAVESGSALILV 642

Query: 2162 EDVVDADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEEDRVQE-------AVP 2320
            +  +DAD+VY+R+V+ A+ +P GPVFRHR KK  I KSE QE+++   +E          
Sbjct: 643  DADLDADIVYQRAVAFAKSAPPGPVFRHRSKKASIRKSEKQESKDSEPKEFLNLEYLETN 702

Query: 2321 VADRKPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
            V+     E   SK   +K     +N  S A  G LGVDE+AKLLA
Sbjct: 703  VSQTMGSENKSSKPQRKKKSREQQNLNS-ARLGRLGVDELAKLLA 746


>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
            lycopersicum]
          Length = 766

 Score =  620 bits (1598), Expect = e-174
 Identities = 358/781 (45%), Positives = 457/781 (58%), Gaps = 36/781 (4%)
 Frame = +2

Query: 221  TVTPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQ 400
            T+  FPIF+PPA            E+RFSRWNNANAEKF R +R  KEIED++R H+R+ 
Sbjct: 5    TLIQFPIFSPPAP---PHSHRPATEIRFSRWNNANAEKFIRHERTQKEIEDEIRFHKRFD 61

Query: 401  SALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATN- 577
            S LSIA                                         P  KS +S   + 
Sbjct: 62   SVLSIANNYNPAPPSPVAEKTFKSTGTPSTPSSPSI-----------PGKKSKYSRNFHN 110

Query: 578  -----HPAFRK-VRTRPIPTKEAAEGEGEP-LDIRVVQGGVSYVVPGAPFEYMYSYTETP 736
                 HPAF+  VRTR IP +   E  G+  +DI+V + GV Y  P APF Y YSYTETP
Sbjct: 111  NPRQIHPAFKPLVRTRKIPVETPDETAGKSDIDIKVDENGVCYEFPEAPFVYQYSYTETP 170

Query: 737  KAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKPVQRPG 913
            K KP  LREP ++PFGP++M RPWTGR           EFDSF  PP  KKG+KPVQ PG
Sbjct: 171  KVKPRKLREPLVSPFGPESMQRPWTGRKPLPPSKKKLPEFDSFQLPPPHKKGVKPVQAPG 230

Query: 914  PFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHW 1093
            PFL GSGPKYV SR                    +K++RQ+N+GRDGLTHNML+NIH+HW
Sbjct: 231  PFLAGSGPKYVKSREEVLGEPLTKEEMMELINSCKKTTRQMNIGRDGLTHNMLENIHAHW 290

Query: 1094 KRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLM 1273
            KR+RVCKIKCKGVCTVDMDNVC++LEEKTGGKIIY +GG ++LFRGRNYNY TRP+FPLM
Sbjct: 291  KRKRVCKIKCKGVCTVDMDNVCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFPLM 350

Query: 1274 LWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEA 1453
            LW+PV+PVYPRLV+R+P+GLTL+EA+EMR+KGR+LIPICKLAKNGVY DLV +VREAFEA
Sbjct: 351  LWRPVTPVYPRLVRRVPEGLTLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEA 410

Query: 1454 CELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASG--- 1624
            CELV I+CQG+NPSDY+KIG KLKDLVPCVLISFE EHIL+WRGR+W SS   +      
Sbjct: 411  CELVCINCQGLNPSDYRKIGAKLKDLVPCVLISFEQEHILIWRGRDWVSSLPEDGDNPEI 470

Query: 1625 --NAESTINXXXXXXXXXXXXXXXXXXXXXXXNESSEANL---TLMVGREEGSQLEDNTE 1789
               +ES                           E +  NL   T  +G E+   +  +  
Sbjct: 471  REGSESVNAANTNRSFEVQVVASTAGSSSLPVTEVNTYNLSANTFPLGDEDAEYVRKDGT 530

Query: 1790 SSPLLSAEQEISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAV 1969
                       S+     + TG + S I      V  G+ GD S      ++    S   
Sbjct: 531  KEDRSEDHYPESSNKVSVTTTGISKSEI----PLVYAGDTGDNSRILSDCRECKTRSDD- 585

Query: 1970 SVFTLEGTQSTNDGQIVSSTDGETLDP----------INTHQSSGPADLEQPYMQEVLLL 2119
            SV   E    +    + +  D  +L P          ++T+Q+        P  + +LLL
Sbjct: 586  SVVDKESEFESASDDVENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLL 645

Query: 2120 LRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEED 2299
             +QA+ESG+A+V ++  +DAD+VY+R+V+L+   P GPVF+H+PKKV + +   +E  + 
Sbjct: 646  WKQAIESGSAVVLNDSSIDADIVYQRAVALSTSVPPGPVFQHQPKKVSVQRRGEEEIGDL 705

Query: 2300 RV---QEAVPVADRKP------KEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLL 2452
             V   +   P + RK       K  S + T   K KG+ ++Y +V PKGSLGVDE+AKLL
Sbjct: 706  EVGCTKLDTPASSRKETVVSSRKVNSTTSTRKEKKKGIRKDYLNVVPKGSLGVDELAKLL 765

Query: 2453 A 2455
            A
Sbjct: 766  A 766


>gb|EMJ04984.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  616 bits (1588), Expect = e-173
 Identities = 360/778 (46%), Positives = 446/778 (57%), Gaps = 27/778 (3%)
 Frame = +2

Query: 203  MALIRPTVTPFPIFAPPAQYXXXXXXXXXX---EVRFSRWNNANAEKFNRQQRNLKEIED 373
            MAL  PT  P  IFAP                 EVRF+RWNNANAEKFN ++R  +EIED
Sbjct: 1    MALNLPTSCP--IFAPLLNLNPNHNPTPNRPPTEVRFARWNNANAEKFNERRRAQQEIED 58

Query: 374  DLRRHRRYQSALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTK 553
            D+RR RR+ SA  IA            S                           NPN K
Sbjct: 59   DIRRERRFDSATRIATIYDSATDTTTTSE-TFKSVGTPSFPSSPSIPGKKSKYSKNPNPK 117

Query: 554  SPFSMATNHPAFRKVRTRPIPTKEAAEGEGEPLD----IRVVQGGVSYVVPGAPFEYMYS 721
                   +HPAFR++  RP    +  + +G  +D    I V   G+SYV+ GAPFE+ YS
Sbjct: 118  E------SHPAFRRI-IRPTKLSKIPKDKGPTVDRKANISVGDDGLSYVIDGAPFEFKYS 170

Query: 722  YTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKP 898
            YTETPK KPL LREP   PFGP TM RPWTGR           EFDSF  PP  KKG+KP
Sbjct: 171  YTETPKVKPLKLREPAYAPFGPTTMARPWTGRAPLPPSKKKLKEFDSFQLPPPHKKGVKP 230

Query: 899  VQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDN 1078
            VQ PGP+LPGSGPKYV SR                     K+ RQLNMGRDG THNMLDN
Sbjct: 231  VQSPGPYLPGSGPKYVKSRDEILGDPLTPEEVKELVKGCIKTRRQLNMGRDGFTHNMLDN 290

Query: 1079 IHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRP 1258
            IH+HWKRRRVCKIKCKGVCTVDMDNVC+Q+EEKTGGKIIYR+GG ++LFRGRNYNY+TRP
Sbjct: 291  IHAHWKRRRVCKIKCKGVCTVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRNYNYKTRP 350

Query: 1259 QFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVR 1438
            QFPLMLW+P++PVYPRLV+R P+GLTL+EA+EMR+KGR+LIPICKL KNGVY +L  + R
Sbjct: 351  QFPLMLWRPITPVYPRLVQRAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYSELAKNAR 410

Query: 1439 EAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSF---- 1606
            EAFE CELVRI+C GMN SDY+KIG KLKDLVPCVLISFE EHIL+WRGREW+SS     
Sbjct: 411  EAFEECELVRINCTGMNGSDYRKIGAKLKDLVPCVLISFELEHILMWRGREWKSSIPYPE 470

Query: 1607 ----DVNASGNAESTI----NXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREE 1762
                +V  S   +ST                             N S+ +  + +VG EE
Sbjct: 471  NDLKEVKGSDVDDSTSIAPPLEGQEESTSCASTVSVKDASLEILNTSTPSIGSEVVGAEE 530

Query: 1763 GSQLEDNTESSPLLSAEQEISAENADSSITGNTSSSIEEDEESVAFGNKG---DVSNTGP 1933
               L  +    P  + +          +    T S +E+DE        G    + NTG 
Sbjct: 531  SGDLSPSQYVEPCATVD---GVSAVGGTHVTETISDVEDDESKAILDPSGIDRILDNTGC 587

Query: 1934 YAQDDTHISPAVSVFTLEGTQSTNDGQIVSSTDGETLDPINTHQSSGPADLEQPYMQEVL 2113
             A +        S  T+ G   +N+    +S   E L        S PA    P M+ VL
Sbjct: 588  AADE-------ASPTTVTGGPRSNENPQCASVSSENL--------SEPARSSGPCMENVL 632

Query: 2114 LLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVFR-HRPKKVVINKS---EN 2281
            LLL +AV SG+A++ D+  +DAD++++R+V+LA+ +P GPVF+ HRPKKV + K      
Sbjct: 633  LLLNEAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVFKHHRPKKVAVQKRIKIMK 692

Query: 2282 QETEEDRVQEAVPVADRKPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
            QE     V+E      R  ++     T  ++ +    +  +V P+GSL VDE+AKLLA
Sbjct: 693  QEASVSEVKEITVPVKRGSEKIQMKDTKVKRTRDFGESLDNVVPQGSLRVDELAKLLA 750


>ref|XP_002332503.1| predicted protein [Populus trichocarpa]
          Length = 699

 Score =  613 bits (1582), Expect = e-173
 Identities = 352/754 (46%), Positives = 440/754 (58%), Gaps = 11/754 (1%)
 Frame = +2

Query: 227  TPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSA 406
            TPFPIFAPP+            EV FSRW NANA+KFN++ R+ +EIE+D+ R RR+ SA
Sbjct: 8    TPFPIFAPPSP---NPSHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSA 64

Query: 407  LSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFS--MATNH 580
             +I               F                          P  KS +S  +   H
Sbjct: 65   NNIVTNYDPKNAAEVDISFFKSTGTPSSPSSPSI-----------PGKKSKYSKPLKKTH 113

Query: 581  PAFRKVRTR-PIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLAL 757
            PAF    TR P+P   A        DI++ + GVSYV+ GAPFE+ YSYTETPK KPL L
Sbjct: 114  PAFLPKITRVPLPRNNAKPPIDRKADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKL 173

Query: 758  REPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSG 934
            RE P  PFGP TMPRPWTGR           EFDSF  PP  KKG+KPVQ PGPFLPG+G
Sbjct: 174  REAPYAPFGPITMPRPWTGRAPLPPSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAG 233

Query: 935  PKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCK 1114
            P+Y  +R                     K+ RQLNMGRDGLTHNMLDNIH+HWKRRRVCK
Sbjct: 234  PRYAKTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCK 293

Query: 1115 IKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSP 1294
            IKCKGVCTVDMDNVCQQLEE+TGGKIIYR+GG ++LFRGRNYNYR RP+FPLMLWKPV+P
Sbjct: 294  IKCKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTP 353

Query: 1295 VYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRID 1474
            VYPRL++R P+GLTL EAS MR KGR LIPICKL KNGVY DLV +VREAFE CELVRI+
Sbjct: 354  VYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRIN 413

Query: 1475 CQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXXX 1654
            CQGMN SD++KIG KL+DLVPCVLISFE EHIL+WRGR+W+SSF                
Sbjct: 414  CQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWRGRDWKSSF---------------- 457

Query: 1655 XXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAEN 1834
                                N+  EA         + S ++  T ++PLL   Q  +   
Sbjct: 458  ----------------TKPVNDGDEA---------KNSSIDGATSATPLLEGLQNETFSV 492

Query: 1835 ADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTLEGTQSTNDGQ 2014
             D+S     +S ++ +++      K D+  T         IS +  ++  + T   +D  
Sbjct: 493  KDASTLNLKTSRMDAEDQGEDLSQK-DIDET---FAAKIFISTSTEIYESKTTPDNDDSS 548

Query: 2015 IVSSTD------GETLDPINT-HQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVV 2173
             V+ ++      G  L  ++     S  A L + Y Q VL LL+QAVE G+A+V D + +
Sbjct: 549  AVTKSEAMRIASGSELQNVSEGSHVSELAKLNESYTQGVLELLKQAVEIGSAVVLDAN-L 607

Query: 2174 DADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEEDRVQEAVPVADRKPKEPSR 2353
            DAD VY+++V+ A+ +P GPVFR +P+  V+ KSE QE  E  V++    +  K    S 
Sbjct: 608  DADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEMQENGELEVKQVTSFS--KMGGGSE 665

Query: 2354 SKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
             K+   + K     Y    P+GSL VDE+AKLLA
Sbjct: 666  RKSSKVRRKYFNEQYVDSVPQGSLRVDELAKLLA 699


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
            gi|550312256|gb|ERP48370.1| hypothetical protein
            POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  609 bits (1571), Expect = e-171
 Identities = 354/753 (47%), Positives = 444/753 (58%), Gaps = 10/753 (1%)
 Frame = +2

Query: 227  TPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSA 406
            TPFPIFAPP+            EV FSRW NANA+KFN++ R+ +EIE+D+ R RR+ SA
Sbjct: 8    TPFPIFAPPSP---NPSHRPSTEVHFSRWFNANADKFNQRYRSQQEIEEDISRRRRFTSA 64

Query: 407  LSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFS--MATNH 580
             +I               F                          P  KS +S  +   H
Sbjct: 65   NNIVTNYDPKNAAEVDISFFKSTGTPSSPSSPSI-----------PGKKSKYSKPLKKTH 113

Query: 581  PAFRKVRTR-PIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLAL 757
            PAF    TR P+P   A        DI++ + GVSYV+ GAPFE+ YSYTETPK KPL L
Sbjct: 114  PAFLPKITRVPLPRNNAKPPIDRKADIKLSEDGVSYVIDGAPFEFKYSYTETPKVKPLKL 173

Query: 758  REPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSG 934
            RE P  PFGP TMPRPWTGR           EFDSF  PP  KKG+KPVQ PGPFLPG+G
Sbjct: 174  REAPYAPFGPITMPRPWTGRAPLPPSKKKLREFDSFVLPPPDKKGVKPVQAPGPFLPGAG 233

Query: 935  PKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCK 1114
            P+Y  +R                     K+ RQLNMGRDGLTHNMLDNIH+HWKRRRVCK
Sbjct: 234  PRYAKTREEILGDPLTQEEIQELVDGCLKAKRQLNMGRDGLTHNMLDNIHAHWKRRRVCK 293

Query: 1115 IKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSP 1294
            IKCKGVCTVDMDNVCQQLEE+TGGKIIYR+GG ++LFRGRNYNYR RP+FPLMLWKPV+P
Sbjct: 294  IKCKGVCTVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTP 353

Query: 1295 VYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRID 1474
            VYPRL++R P+GLTL EAS MR KGR LIPICKL KNGVY DLV +VREAFE CELVRI+
Sbjct: 354  VYPRLIQRAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRIN 413

Query: 1475 CQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXXX 1654
            CQGMN SD++KIG KL+DLVPCVLISFE EHIL+WRGR+W+SSF    +   E+  N   
Sbjct: 414  CQGMNGSDFRKIGAKLRDLVPCVLISFECEHILMWRGRDWKSSFTKPVNDGDEAK-NSSI 472

Query: 1655 XXXXXXXXXXXXXXXXXXXXNESSEANL--TLMVGREEGSQLE----DNTESSPLLSAEQ 1816
                                 ++S  NL  + M   ++G  L     D T ++ +  +  
Sbjct: 473  DGATSATPLLEGLQNETFSVKDASTLNLKTSRMDAEDQGEDLSQKDIDETFAAKIFISTS 532

Query: 1817 EISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTLEGTQ 1996
                E+  +    ++S+  + +   +A G++  + + G Y  +    +   S  TLE   
Sbjct: 533  TEIYESKTTPDNDDSSAVTKSEAMRIASGSEVILDDRG-YIDEMLITTSVESDTTLERIG 591

Query: 1997 STNDGQIVSSTDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVD 2176
            +    Q VS           +H S   A L + Y Q VL LL+QAVE G+A+V D + +D
Sbjct: 592  NMEKLQNVSE---------GSHVSE-LAKLNESYTQGVLELLKQAVEIGSAVVLDAN-LD 640

Query: 2177 ADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEEDRVQEAVPVADRKPKEPSRS 2356
            AD VY+++V+ A+ +P GPVFR +P+  V+ KSE QE  E  V++    +  K    S  
Sbjct: 641  ADAVYQKAVAFAQSAPPGPVFRRQPRNTVVQKSEMQENGELEVKQVTSFS--KMGGGSER 698

Query: 2357 KTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
            K+   + K     Y    P+GSL VDE+AKLLA
Sbjct: 699  KSSKVRRKYFNEQYVDSVPQGSLRVDELAKLLA 731


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  604 bits (1558), Expect = e-170
 Identities = 369/804 (45%), Positives = 454/804 (56%), Gaps = 53/804 (6%)
 Frame = +2

Query: 203  MALIRPTVTPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLR 382
            MAL  P   PFPIFAP              E+RFSRWNNANAEKFN ++R L++IEDD+R
Sbjct: 1    MALKLPI--PFPIFAPHLNPSPPQYHRLPTELRFSRWNNANAEKFNERRRTLQQIEDDIR 58

Query: 383  RHRRYQSALSIAXXXXXXXXXXXXS--GFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKS 556
            R RR+ SA  I+            S  G                          NPN   
Sbjct: 59   RQRRFDSATRISDIPDSASPSTAGSATGEFFKSIGTPSSPSRPSIPGKKSKYSKNPN--- 115

Query: 557  PFSMATNHPAFRKV-RTRPIPTKEAA------EGEGEPLDIRVVQGGVSYVVPGAPFEYM 715
            P   + +HPAFR + R R I  KE +             D+RV + GVSYV+ GAPFE+ 
Sbjct: 116  PSFDSRSHPAFRPLRRVRKIAVKELSGLPKDKRDVERKADVRVGEDGVSYVIDGAPFEFK 175

Query: 716  YSYTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSF-TAPPSKKGM 892
            YSYTETPKA+P+ LRE P  PFGP TMPRPWTGR           EFDSF  +PP KKG+
Sbjct: 176  YSYTETPKAQPVKLREAPYAPFGPTTMPRPWTGRAPLPPSKKKLKEFDSFRLSPPHKKGV 235

Query: 893  KPVQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNML 1072
            KPVQ PGPFLPGSGPKYV SR                    RK+ RQ+NMGRDGLTHNML
Sbjct: 236  KPVQAPGPFLPGSGPKYVMSREEILGEPLTEEEIKDLIEGCRKTKRQMNMGRDGLTHNML 295

Query: 1073 DNIHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRT 1252
            DNIH+HWKRRRVCKIKCKGVCTVDMDNV +QLEE+TGGKIIY +GG +FLFRGRNYNYRT
Sbjct: 296  DNIHAHWKRRRVCKIKCKGVCTVDMDNVKEQLEERTGGKIIYGKGGVIFLFRGRNYNYRT 355

Query: 1253 RPQFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVAD 1432
            RP+FPLMLWKPV+PVYPRLVKR+P+GLTL+EA EMR+KG  L+PICKL KNGVY +LV  
Sbjct: 356  RPRFPLMLWKPVTPVYPRLVKRVPEGLTLEEAKEMRKKGHKLMPICKLGKNGVYHNLVKH 415

Query: 1433 VREAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSF-- 1606
            VREAFE CELVRI+CQGMN SDY+KIG KLKDLVPCVL+SF  EHIL+WRG +W+SS   
Sbjct: 416  VREAFEECELVRINCQGMNGSDYRKIGAKLKDLVPCVLLSFAFEHILIWRGCDWKSSLPK 475

Query: 1607 -----------DVNASGNAESTINXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVG 1753
                       DV    +   ++                          +    +    G
Sbjct: 476  LVKDRDEAKESDVQIVTSVAPSVEGEEVAMSTGSVNDASLELISTTSTLNRSHEVIGTEG 535

Query: 1754 REEGSQLEDNTESSPLLSAEQEI----SAENADSSI--------TGNTSSSIEEDEESVA 1897
            RE+ S +E     S       EI    + + +D  I        T NTS +    E S +
Sbjct: 536  REDSSSVEYVEPCSTTGDVSNEIKTFATEKISDVQIPVDDRLGDTSNTSYNGTTSENSGS 595

Query: 1898 FGNKGDV-----SNTGPYAQDDTHISPAVSVFTLEGTQSTNDGQIVSS----TDGETLDP 2050
             G + D       +T     D   I P V+    E   +  +   +++       E L  
Sbjct: 596  NGTRSDSIECDGLSTAMLGLDT--IIPKVADGNAEMKSALFEADSLANEKEQVPSEVLQD 653

Query: 2051 INTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAG 2230
            +N      P  L  P  + VL LL+QAV  G AI+ DED +D+D+VY+R+V+ ++ +P G
Sbjct: 654  VNQ-----PTRLNAPCTEGVLSLLQQAVVGGLAIILDEDNLDSDVVYQRTVAFSQSAPPG 708

Query: 2231 PVFRHR-----PKKVVINKSENQETEEDRVQEAVPVADRK--PKEPSRSK-TDTRKLKGL 2386
            PVF+ R     PKKV++  SE  E E+   ++  P   R    KE S  K +  R+ K  
Sbjct: 709  PVFKGRPRKMLPKKVMVKNSEVLENEKQDTEDFAPKEIRTIYVKEGSGKKASKARRRKDF 768

Query: 2387 PRNYGS-VAPKGSLGVDEIAKLLA 2455
              N  + V P+GSL VDE+AKLLA
Sbjct: 769  GENLDNVVVPQGSLRVDELAKLLA 792


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
            vesca subsp. vesca]
          Length = 804

 Score =  600 bits (1548), Expect = e-169
 Identities = 357/816 (43%), Positives = 464/816 (56%), Gaps = 65/816 (7%)
 Frame = +2

Query: 203  MALIRPTVTPFPIFAPPAQ---YXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIED 373
            MAL  PT  P  IFAPP                EVRF+RWNNANAEKFN+++R  +EIED
Sbjct: 1    MALNLPTSCP--IFAPPVNPNPAHNPIHTRPPTEVRFARWNNANAEKFNQRRRAQQEIED 58

Query: 374  DLRRHRRYQSALSIAXXXXXXXXXXXX-SGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNT 550
            D RR RR+ SA  IA             + F                         NPN 
Sbjct: 59   DFRRERRFDSATRIATVSVAGSSTSDAETAFKSIGTPSSPSRPSIPGKKSKYSENPNPNP 118

Query: 551  KSPFSMATNHPAFRKVRTRPIPTKEAAEGEGEP-----LDIRVVQGGVSYVVPGAPFEYM 715
             S       HPAFR+V     PTK ++    +P      +I +   G+SYV+ GAPFE+ 
Sbjct: 119  SS-------HPAFRRVIK---PTKLSSITREKPEVDRKANISIGDDGLSYVIDGAPFEFK 168

Query: 716  YSYTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGM 892
            YSYTETPK KP+ LREPP  PFGP TM RPWTGR           EFDSF  PP  KKG+
Sbjct: 169  YSYTETPKQKPIKLREPPYAPFGPTTMGRPWTGRAPLPASKKKMKEFDSFQLPPPHKKGV 228

Query: 893  KPVQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNML 1072
            +PVQ PGP+LPGSGPKYV SR                     K+ RQLNMGRDGLTHNML
Sbjct: 229  RPVQSPGPYLPGSGPKYVKSREEILGDPLTDQEVKDLVNGCIKTRRQLNMGRDGLTHNML 288

Query: 1073 DNIHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRT 1252
            DNIH+HWKRRRVCKIKCKGVCTVDM+NVCQQLEE+TGGKIIYRRGG +FLFRGRNYNY+T
Sbjct: 289  DNIHAHWKRRRVCKIKCKGVCTVDMENVCQQLEERTGGKIIYRRGGVIFLFRGRNYNYKT 348

Query: 1253 RPQFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVAD 1432
            RP+FPLMLW+P++PVYPRL++R P+GLT++EA+EMR+KGRDLIPI KL KNGVY DLV +
Sbjct: 349  RPRFPLMLWRPITPVYPRLIQRAPEGLTVEEATEMRKKGRDLIPIRKLGKNGVYSDLVDN 408

Query: 1433 VREAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSF-- 1606
            VREAFE CELVRIDCQGMN SDY+KIG KLKDLVPCVLISFE E IL+WRGREW+SS   
Sbjct: 409  VREAFEECELVRIDCQGMNGSDYRKIGAKLKDLVPCVLISFERESILMWRGREWKSSLVN 468

Query: 1607 ------DVNASGNAESTINXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGS 1768
                  +V  S   +S                           E  + +++  +    G+
Sbjct: 469  PESNLKEVKESNVDDSPSIALSLEGEDASTVCAFTGSVKDANPEMIDTSISSSIAEVVGA 528

Query: 1769 QLEDNTESSPLLSA----------------------------EQEISAENADSSITGNTS 1864
            +  ++   SP +                              E E++ +   S +    +
Sbjct: 529  EGTEDPSPSPYIEPPAIIDTVSDVGSTCETVTISDIKGFRDDEAELNMKAYSSLVIPEDT 588

Query: 1865 SSIEEDEESVA--FGNKGDVSNT--GPYAQDDTHISPAVSVFTLEGTQSTNDGQIVSSTD 2032
            S  +++ E+++   G +  + NT     A   T +     + T+E T++  +  + S   
Sbjct: 589  SYADDESETISSTSGTEDILDNTRHADEASPTTSVGTGAILVTVENTETKLNTLMESPGS 648

Query: 2033 GETLD--PINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVS 2206
             +T     + +   +  A L     ++VL LL +AV SG+A++ D+  +DAD++Y+R+V 
Sbjct: 649  NKTPQDASVASQNLNERAKLCAACKEKVLSLLNEAVGSGSALILDDSSLDADIIYQRAVD 708

Query: 2207 LARVSPAGPVFRHRP--------KKVVINKSENQETEEDRVQEAVPVADRKPKEPSRS-K 2359
            LA+ +P GPVF+HR         KK+V+ K + + TE +  +  V    R   E  RS +
Sbjct: 709  LAKSAPPGPVFKHRSSRGSAQMRKKLVVRKQKQEATELEVKEITVYDMQRNLGEKKRSER 768

Query: 2360 TDTRKLKGLPRNYG----SVAPKGSLGVDEIAKLLA 2455
             D++  +   R++G    S+ P+GSL VDE+AKLLA
Sbjct: 769  KDSKVHRTRTRDFGEPLDSIVPQGSLRVDELAKLLA 804


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  600 bits (1546), Expect = e-168
 Identities = 350/756 (46%), Positives = 440/756 (58%), Gaps = 11/756 (1%)
 Frame = +2

Query: 221  TVTPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQ 400
            T+ PFPI AP              EVRFSRWNNANAE+F  ++R  KEIED++RR RR+ 
Sbjct: 5    TLIPFPILAPS-----NPSHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFD 59

Query: 401  SALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNH 580
            SA  IA            +G                            ++K   +  T+H
Sbjct: 60   SATRIADIDD--------AGTSKEAAAAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSH 111

Query: 581  PAFRKVRTR-----PIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAK 745
            PAFR++  R     P  + EA  G      I + + GVSY+VPG PFE  YSYTETPK K
Sbjct: 112  PAFRQISRRTKLPGPNISPEAKRG------ISIGEDGVSYMVPGVPFELRYSYTETPKVK 165

Query: 746  PLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFL 922
            P+ALREPP  PFGP TMPRPWTGR           EFDSF  PP  KK +KPVQ PGPFL
Sbjct: 166  PIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFL 225

Query: 923  PGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRR 1102
            PGSGP+YV SR                     KS RQLNMGRDGLTHNMLDNIH+HWKRR
Sbjct: 226  PGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRR 285

Query: 1103 RVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWK 1282
            RVCKIKCKGVCTVDMDNV QQLEEKTGGK+IY +GG +FLFRGRNYNYR RP+FPLMLWK
Sbjct: 286  RVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWK 345

Query: 1283 PVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACEL 1462
            PV+PVYPRLV+R P+GLTL+EA  MR+KGR LIPICKLAKNGVY DLV +VREAFE CEL
Sbjct: 346  PVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECEL 405

Query: 1463 VRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTI 1642
            VRI+CQG+N SDY+KIG KLKDLVPCVLISFE+EHIL+WRG +W+        G  E+  
Sbjct: 406  VRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEA-- 463

Query: 1643 NXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEI 1822
                                     +   A+ +  +  ++ S    +T +SP+++ E   
Sbjct: 464  --------KESDNNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDTIASPVIN-EDVA 514

Query: 1823 SAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDT--HISPAVSVFTLEGTQ 1996
              +  D S  GN   S E +++  A       +       DDT       + +  L+   
Sbjct: 515  MDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSDDTGGTNESEIILTKLDNAH 574

Query: 1997 STNDGQIVSSTDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVD 2176
              +D       +      ++T   +G    + P    +LLLL+QAV+SG+A+V D D  D
Sbjct: 575  HADDESAAMPVE------LDTMLENGSIKNDAPCTGGLLLLLKQAVDSGSAVVLDGDSCD 628

Query: 2177 ADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQETEEDRVQEAV--PVADRKPKEPS 2350
            AD+VY ++V+ ++ +P GPVFR RP+K  + K E +E  +  V + V  P   R   + S
Sbjct: 629  ADIVYGKTVAFSKDAPPGPVFR-RPRKAAVQKCEKEEPRDLVVGKIVTAPEKGRSQSKSS 687

Query: 2351 RSKTDTRKLKG-LPRNYGSVAPKGSLGVDEIAKLLA 2455
            R++      +G L  +Y  V  +G+LGVDE+AKLLA
Sbjct: 688  RNQIAKDFKEGYLDVDYPGVGTRGTLGVDELAKLLA 723


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  593 bits (1530), Expect = e-167
 Identities = 356/779 (45%), Positives = 445/779 (57%), Gaps = 34/779 (4%)
 Frame = +2

Query: 221  TVTPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQ 400
            T+ PFPI AP              EVRFSRWNNANAE+F  ++R  KEIED++RR RR+ 
Sbjct: 5    TLIPFPILAPS-----NPSHRPASEVRFSRWNNANAERFTLRERAQKEIEDNIRRERRFD 59

Query: 401  SALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNH 580
            SA  IA            +G                            ++K   +  T+H
Sbjct: 60   SATRIADIDD--------AGTSKEAAAAGTFKSTGTPSSPSKPSIPGKSSKYSKNSKTSH 111

Query: 581  PAFRKVRTR-----PIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAK 745
            PAFR++  R     P  + EA  G      I + + GVSY+VPG PFE  YSYTETPK K
Sbjct: 112  PAFRQISRRTKLPGPNISPEAKRG------ISIGEDGVSYMVPGVPFELRYSYTETPKVK 165

Query: 746  PLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFL 922
            P+ALREPP  PFGP TMPRPWTGR           EFDSF  PP  KK +KPVQ PGPFL
Sbjct: 166  PIALREPPFLPFGPDTMPRPWTGRAPLPPSKKKLKEFDSFQLPPPGKKRVKPVQAPGPFL 225

Query: 923  PGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRR 1102
            PGSGP+YV SR                     KS RQLNMGRDGLTHNMLDNIH+HWKRR
Sbjct: 226  PGSGPRYVRSREEILGEPLTEEEIKELVQGCVKSKRQLNMGRDGLTHNMLDNIHAHWKRR 285

Query: 1103 RVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWK 1282
            RVCKIKCKGVCTVDMDNV QQLEEKTGGK+IY +GG +FLFRGRNYNYR RP+FPLMLWK
Sbjct: 286  RVCKIKCKGVCTVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWK 345

Query: 1283 PVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACEL 1462
            PV+PVYPRLV+R P+GLTL+EA  MR+KGR LIPICKLAKNGVY DLV +VREAFE CEL
Sbjct: 346  PVTPVYPRLVQRAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECEL 405

Query: 1463 VRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTI 1642
            VRI+CQG+N SDY+KIG KLKDLVPCVLISFE+EHIL+WRG +W+        G  E+  
Sbjct: 406  VRINCQGLNASDYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEA-- 463

Query: 1643 NXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEI 1822
                                     +   A+ +  +  ++ S    +T +SP+++ E   
Sbjct: 464  --------KESDNNSEASIPPPFEGQELSASCSSKISVKDTSLDMLDTIASPVIN-EDVA 514

Query: 1823 SAENADSSITGNTSSSIEEDEESVAF-------------------GNKGDVSNT----GP 1933
              +  D S  GN   S E +++  A                     N+ ++  T      
Sbjct: 515  MDKTEDLSSKGNDILSFEGNDKPFAATQLVKTAYNWDTVSDDTGGTNESEIILTKLDNAH 574

Query: 1934 YAQDDTHISPAVSVFTLEGTQSTNDGQIVSSTDGETLDPI-NTHQSSGP-ADLEQPYMQE 2107
            +A D++   P      LE     N+     + D + L  I    Q  G       P    
Sbjct: 575  HADDESAAMPVELDTMLENGSIKNELMDAVTHDMDKLQDIPKASQDCGKMTGSSAPCTGG 634

Query: 2108 VLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVFRHRPKKVVINKSENQE 2287
            +LLLL+QAV+SG+A+V D D  DAD+VY ++V+ ++ +P GPVFR RP+K  + K E +E
Sbjct: 635  LLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVFR-RPRKAAVQKCEKEE 693

Query: 2288 TEEDRVQEAV--PVADRKPKEPSRSKTDTRKLKG-LPRNYGSVAPKGSLGVDEIAKLLA 2455
              +  V + V  P   R   + SR++      +G L  +Y  V  +G+LGVDE+AKLLA
Sbjct: 694  PRDLVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLGVDELAKLLA 752


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
            CRS2-associated factor 1, chloroplastic-like [Cucumis
            sativus]
          Length = 745

 Score =  583 bits (1504), Expect = e-163
 Identities = 336/761 (44%), Positives = 432/761 (56%), Gaps = 19/761 (2%)
 Frame = +2

Query: 230  PFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSAL 409
            PFPIF P              E+RFSRW NANAEKF +++R+ +EIED++RR RR+ SA 
Sbjct: 8    PFPIFTPQFNPNSTPSHRTLTEIRFSRWYNANAEKFEQRRRSQQEIEDEIRRERRFSSAA 67

Query: 410  SIAXXXXXXXXXXXXSG---FXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNH 580
             I                  F                         NP++ SPF   +  
Sbjct: 68   KIVDLCDSDSPSSAIDRNETFRSVGTPSSPSRPSIPGRKSKYSKNPNPDSPSPFRQVS-- 125

Query: 581  PAFRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLALR 760
                  +T+           G   ++ + + GVSYV+ GAPFE+ YSYTETPK KP+ LR
Sbjct: 126  ------KTKKTMNAPEERHIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPKVKPIKLR 179

Query: 761  EPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSGP 937
            EP   PFGP TM RPWTGR           EFDSF  PP +KKG+KPVQ PGPFL GSGP
Sbjct: 180  EP-YAPFGPTTMSRPWTGRAPLPPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGP 238

Query: 938  KYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCKI 1117
            KYV SR                      S+RQLN+GRDGLTHNML+NIH+ WKRRRVCKI
Sbjct: 239  KYVMSREEILGEPLTKEEIKALIRGCINSNRQLNIGRDGLTHNMLENIHALWKRRRVCKI 298

Query: 1118 KCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSPV 1297
            KCKGVCTVDMDNV QQLEE+TGGKIIY RGGA++L+RGRNYNY+TRP+FPLMLWKP +PV
Sbjct: 299  KCKGVCTVDMDNVKQQLEERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPV 358

Query: 1298 YPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRIDC 1477
            YPRLVK IPDGLTL+E +EMR+KGR LIPICKL KNGVY  LV  VREAFE CELVRI+C
Sbjct: 359  YPRLVKHIPDGLTLEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINC 418

Query: 1478 QGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSF--------DVNASGNAE 1633
            QG+N SD++KIG KLKDLVPCVLISFE+EHIL+WRGR+W+SS            A G  E
Sbjct: 419  QGLNGSDFRKIGAKLKDLVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGTDE 478

Query: 1634 STI---NXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLL 1804
            +TI   +                       NE  ++ +       +   L      S  +
Sbjct: 479  TTIVAPSIEQDVSVKNTLTSLDSEDLSTGGNEDPDSMIAEKSISADVDSLTTTMHESNFV 538

Query: 1805 SAEQEISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTL 1984
            S ++E +  +     T  TS  +  D  S   G + ++ +   ++  D   +  +     
Sbjct: 539  SYDEEATGLDDQKLHTATTSEDL--DSWSTISGGESEIESGYEFSDSDFDEAEPMEQLEF 596

Query: 1985 EGTQSTNDGQIVSSTDGETLDPINTHQSSGPADLEQPYMQE---VLLLLRQAVESGNAIV 2155
            +   +T +    S T+G        + S G   L +P       VL LL+QAVE+G+A+V
Sbjct: 597  DSIAATGN----SETNG-------LYTSEGSQALTKPTSNATDGVLQLLKQAVENGSAVV 645

Query: 2156 FDEDVVDADLVYERSVSLARVSPAGPVFRH-RPKKVVINKSENQETEEDRVQEAVPVADR 2332
             D   +DAD++Y++SV+ ++ +P  PVF+H R KKV  +KSE + + E  V+E       
Sbjct: 646  LDSSSLDADVIYQQSVAFSQSAPPSPVFKHERRKKVAADKSEEETSRELEVKEEETAVSM 705

Query: 2333 KPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
            +     +  + T+K K     Y   +P+GSLGVDE+AKLLA
Sbjct: 706  EVGNDKKKDSKTKKNKNF-GEYNFSSPQGSLGVDELAKLLA 745


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
            gi|355524767|gb|AET05221.1| CRS2-associated factor
            [Medicago truncatula]
          Length = 698

 Score =  554 bits (1427), Expect = e-155
 Identities = 310/680 (45%), Positives = 404/680 (59%), Gaps = 42/680 (6%)
 Frame = +2

Query: 539  NPNTKSPFSMATNHPAFRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMY 718
            N N   P     +HPA   ++   IP ++       P ++++ + GVSYV+ GAPFE+ Y
Sbjct: 28   NKNPSKPKVDPQSHPA---LKFSNIPKQKLKPVNKTPENVKISEDGVSYVIEGAPFEFKY 84

Query: 719  SYTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMK 895
            SYTETPK+KP+ +REPP  PFGP TMPRPWTGR           EFDSF  PP  KKG+K
Sbjct: 85   SYTETPKSKPVQMREPPFVPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVK 144

Query: 896  PVQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLD 1075
            PVQ PGPFLPG+ P+YV SR                   + KSSRQLN+GRDG  HNMLD
Sbjct: 145  PVQSPGPFLPGTSPRYVMSREEVLGEPLTKEEINELVRSTLKSSRQLNLGRDGFIHNMLD 204

Query: 1076 NIHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTR 1255
            NIH+HWKRRRVCKIKC GVCTVDMDNVCQQLEEKTGGK+IYRRGG ++LFRGRNYN++TR
Sbjct: 205  NIHAHWKRRRVCKIKCIGVCTVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTR 264

Query: 1256 PQFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADV 1435
            P+FPLMLWKPV PVYPRL++++P+GLTL+EA+EMR+KGR L PICKL KNGVY +LV +V
Sbjct: 265  PRFPLMLWKPVPPVYPRLIQQVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNV 324

Query: 1436 REAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVN 1615
            REAFE CELVR++CQG+N SDY+KIG KL+DLVPC L+S+ENEHIL+WRGR W+SSF   
Sbjct: 325  REAFEECELVRVNCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKSSFPDL 384

Query: 1616 ASGNAESTINXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESS 1795
                 E+T                         +   E    L          +D T   
Sbjct: 385  VEDFKEATKADADNKNDKTLQSEALDVSTPSLNHNPVEHVSNLSHDTSISFCPDDVTVDK 444

Query: 1796 ---PLLSAEQEISAENADSSITGNTSSSIEEDEESVA---FGNKGDVSNTGP---YAQDD 1948
               P  +++Q +S   AD+S+T       E +  +VA   +G     SNT P    + D 
Sbjct: 445  VPCPTKNSKQSMSVV-ADASLT----KVYEAETTNVATDSYGEPESCSNTSPGMTISHDS 499

Query: 1949 THIS-PAVSVFTLEGTQSTNDGQ---------------IVSSTDGETLDPINTH-----Q 2065
             H   P+ ++    GT    D +               ++ S +      ++ H      
Sbjct: 500  RHTECPSNAISDSHGTSDIMDDKGFGDCLSTSISGSNAMLGSRNSNIYGTVDPHADELLN 559

Query: 2066 SSGPADLE------QPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPA 2227
             SG AD+        P+M+ + LLL QAVE GNA+V D+D +DAD VY  +VS A+ +P 
Sbjct: 560  DSGAADVSPLPRAAAPFMKGISLLLEQAVEQGNALVLDKDSLDADNVYRTTVSFAQSAPP 619

Query: 2228 GPVF-RHRPKKVVINKSENQETEEDRVQEAVPVADRKPKEPSRSKTD----TRKLKGLPR 2392
            GPVF +HR  KV + KS+ QE      +E   V  +     ++ K +     R+ +    
Sbjct: 620  GPVFMKHR--KVAVQKSDKQEALTPETRETTTVTTKGTTVATKGKRERSPRIRRKENFDE 677

Query: 2393 NYGSVAPKGSLGVDEIAKLL 2452
             + ++ P+G+LGVDE+AKLL
Sbjct: 678  RFMNLVPQGTLGVDELAKLL 697


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
            gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
            Full=CRS2-associated factor 1, chloroplastic; AltName:
            Full=Chloroplastic group IIA intron splicing facilitator
            CRS2-associated factor 1; Flags: Precursor
            gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
            thaliana] gi|20197570|gb|AAD24394.2| expressed protein
            [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1| unknown
            protein [Arabidopsis thaliana]
            gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
            [Arabidopsis thaliana]
          Length = 701

 Score =  553 bits (1426), Expect = e-154
 Identities = 319/768 (41%), Positives = 433/768 (56%), Gaps = 25/768 (3%)
 Frame = +2

Query: 227  TPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSA 406
            TPFPIFAP              E+RFSRW NANAE+F +++R+ +E+E ++RR RR+ +A
Sbjct: 7    TPFPIFAP--SLFPNHNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAA 64

Query: 407  LSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNHPA 586
              I                                          P  +S +S   + P 
Sbjct: 65   TKIVHTHDSEAAAAEPKTSPFRSRGTPSLPSARSI----------PGRRSKYSKPDSGP- 113

Query: 587  FRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLALREP 766
              + + +P       + + +P ++++ + G++YV+ GAPFE+ YSYTETPK KPL LREP
Sbjct: 114  -NRPKNKPRVPDSPPQLDAKP-EVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREP 171

Query: 767  PMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSGPKY 943
               PFGP TM RPWTGR           EFDSF  PP  KKG+KPVQ+PGPF PG GP+Y
Sbjct: 172  AYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRY 231

Query: 944  VWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCKIKC 1123
            V+S+                     K++RQLNMGRDGLTHNML+NIH  WKRRRVCKIKC
Sbjct: 232  VYSKEEILGEPLTKEEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKC 291

Query: 1124 KGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSPVYP 1303
            KGVCTVDMDNVC+QLEEK GGK+IYRRGG +FLFRGRNYN+RTRP+FPLMLWKPV+PVYP
Sbjct: 292  KGVCTVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYP 351

Query: 1304 RLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRIDCQG 1483
            RL++++P+GLT  EA+ MRRKGR+L+PICKL KNGVY DLV +V+EAFE CELVRIDCQG
Sbjct: 352  RLIQQVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQG 411

Query: 1484 MNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXXXXXX 1663
            M  SD++KIG KLKDLVPCVL+SFENE IL+WRGREW+SS                    
Sbjct: 412  MKGSDFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSS-------------------- 451

Query: 1664 XXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAENADS 1843
                                      L    ++G  LED    + L         E+ + 
Sbjct: 452  --------------------------LTTPDKKGDILEDIEVDTAL--------PEDDEP 477

Query: 1844 SITGNTSSSIEEDE--ESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTLEGTQSTNDGQI 2017
            S++ N S ++ ++   +S+   N  D  +  P   D + +   ++      T+   +   
Sbjct: 478  SVSPNQSQTMTQNPPLDSMELQNDPDGHDLSPSTVDSSEMEGTINSLQSWSTKDVTE-PT 536

Query: 2018 VSSTDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYER 2197
            V S   +  +P +  ++S   ++ +  ++ VL+L++QAVESG A+V D   +DAD V+ +
Sbjct: 537  VDSFLRDLEEPEDEPETS--EEISKQSIERVLILMKQAVESGTALVLDAADLDADTVFSK 594

Query: 2198 SVSLARVSPAGPVFRH-RPKKVVINKSENQE----TEEDRVQEAV--------------- 2317
            +V+ + V+  GPVF+H   K+  + K E+QE      E +    V               
Sbjct: 595  AVAFSSVASPGPVFQHGLRKQPTVKKQESQEFGYGDLEAKSSNVVVSRNASKSSNVVVFG 654

Query: 2318 --PVADRKPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
               VA+R  +E  + +   +K+     +Y  V P G+L VDE+AKLLA
Sbjct: 655  KREVAERGERE-EKEEGSKKKMDEFAEDYREVMPHGTLKVDELAKLLA 701


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
            lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
            ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  553 bits (1425), Expect = e-154
 Identities = 323/769 (42%), Positives = 427/769 (55%), Gaps = 26/769 (3%)
 Frame = +2

Query: 227  TPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSA 406
            TPFPIFAP              E+RFSRW NANAE+F +++R+ +E+E ++RR RR+ +A
Sbjct: 7    TPFPIFAP--SLFPNHNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAA 64

Query: 407  LSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNHPA 586
              I                                          P  +S +S   + P 
Sbjct: 65   TKIVHTHDSEAAASEPKTSPFRSRGTPSLPSARSI----------PGRRSKYSKPDSGP- 113

Query: 587  FRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLALREP 766
              K + +P       + + +P ++++ + G+SYV+ GAPFE+ YSYTETPK KPL LREP
Sbjct: 114  -NKPKNKPRVPDSPPQLDAKP-EVKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREP 171

Query: 767  PMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKPVQRPGPFLPGSGPKY 943
               PFGP TM RPWTGR           EFDSF  PP  KKG+KPVQ+PGPF PG GP+Y
Sbjct: 172  AYAPFGPTTMGRPWTGRAPLPQSQKTPREFDSFRLPPDGKKGVKPVQKPGPFRPGLGPRY 231

Query: 944  VWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCKIKC 1123
            V+++                     K++RQLNMGRDGLTHNML+NIH  WKRRRVCKIKC
Sbjct: 232  VYTKEEILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKC 291

Query: 1124 KGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSPVYP 1303
            KGVCTVDMD VC+QLEEK GGK+IYRRGG +FLFRGRNYN+RTRP+FPLMLWKPV+PVYP
Sbjct: 292  KGVCTVDMDKVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYP 351

Query: 1304 RLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRIDCQG 1483
            RL++++P+GLTL EA+EMRRKGR+L+PICKL KNGVY DLV +V+EAFE CELVRIDCQG
Sbjct: 352  RLIQQVPEGLTLQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQG 411

Query: 1484 MNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXXXXXX 1663
            M  SD++KIG KLKDLVPCVLISFENE IL+WRGREW+SS  +                 
Sbjct: 412  MKGSDFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTI----------------- 454

Query: 1664 XXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAENADS 1843
                              E  EA+++        +Q +  T++ PL S E +      D 
Sbjct: 455  PDKKDDILEDIEVDAALPEDDEASVS-------PNQTQTVTQNPPLDSMELQNDPGGHDL 507

Query: 1844 SITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTLEGTQSTNDGQIVS 2023
            S +    S++E+   S+                     SP+    T + T+ T D  I  
Sbjct: 508  SPSTVDFSAMEDTSNSLQ--------------------SPS----TKDLTEPTADSSIQD 543

Query: 2024 STDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSV 2203
              + E       H+     ++ +  ++ VL L++QAVESG A+V D   +DAD V+ ++V
Sbjct: 544  HEEPE-------HEPETSEEISKQSIERVLNLMKQAVESGTALVLDAADLDADTVFSKAV 596

Query: 2204 SLARVSPAGPVFRHRPKK-----------------------VVI--NKSENQETEEDRVQ 2308
            + + V+  GPVF+H  +K                       VV+  N S++        +
Sbjct: 597  TFSTVASPGPVFQHGLRKQPTVKKQESREFGYRNLEAKSSNVVVSRNASKSSNVVVSGKR 656

Query: 2309 EAVPVADRKPKEPSRSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
            E     +R+ KE  + K D         +Y  V P G+L +DE+AKLLA
Sbjct: 657  EVAVSGEREEKEGLKKKMDE-----FAEDYREVIPHGTLKLDELAKLLA 700


>ref|XP_004503464.1| PREDICTED: LOW QUALITY PROTEIN: CRS2-associated factor 1,
            chloroplastic-like [Cicer arietinum]
          Length = 706

 Score =  545 bits (1403), Expect = e-152
 Identities = 308/674 (45%), Positives = 392/674 (58%), Gaps = 37/674 (5%)
 Frame = +2

Query: 542  PNTKSPFSMATNHPAFRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYS 721
            P TK P     +HPA  K    P  T +      E  ++++   G+SYV+ GAPFE+ YS
Sbjct: 39   PTTK-PKLDPQSHPAL-KFSNIPKQTSKPVSKASE--NVKISDDGLSYVIEGAPFEFKYS 94

Query: 722  YTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKP 898
            YTETPKAKPL LREP   PFGP TMPRPWTGR           EFDSF  PP  KKG+KP
Sbjct: 95   YTETPKAKPLKLREPGFLPFGPVTMPRPWTGRPPLPPSKKKLKEFDSFVLPPPHKKGVKP 154

Query: 899  VQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDN 1078
            VQ PGP+LPG+ PKYV SR                     KSSRQLNMGRDG THNMLDN
Sbjct: 155  VQSPGPYLPGTSPKYVRSREEVLGEPLTKEEIKVLVQSCLKSSRQLNMGRDGFTHNMLDN 214

Query: 1079 IHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRP 1258
            IH+HWKRRRVCKIKC GVCTVDMDNVC QLEEKTGGK+IYRRGG ++LFRGRNYNY+TRP
Sbjct: 215  IHAHWKRRRVCKIKCLGVCTVDMDNVCHQLEEKTGGKVIYRRGGVLYLFRGRNYNYKTRP 274

Query: 1259 QFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVR 1438
             FPLMLWKPV PVYP+L++R+P+GLTL+EA+EMR+KGR L PICK+ KNGVY +LV +VR
Sbjct: 275  LFPLMLWKPVPPVYPKLIQRVPEGLTLEEATEMRQKGRTLTPICKIGKNGVYFNLVKNVR 334

Query: 1439 EAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNA 1618
            EAFE CELVRI+CQG+N SDY+KIG KL+DLVPC L+S+ENEHIL+WRGR W+ S     
Sbjct: 335  EAFEECELVRINCQGLNKSDYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKPSLPDLR 394

Query: 1619 SGNAESTINXXXXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESS- 1795
                E+                          N  +E    L         L+D T    
Sbjct: 395  DDRKEANKVDPDNKNYKALPSEALDVSAPNLHNNPAELVSNLSHDTSISFCLDDVTVDKV 454

Query: 1796 ----PLLSAEQEISAENADSSITGNTSSSIEEDEESVAFGNKGDVSNTGPY------AQD 1945
                P  ++++ +S   AD+ IT   + S  E E   +     ++S+ G +      A  
Sbjct: 455  EVPCPTKNSKRSMSV-IADAEITNVATDSYGEPEPCRSTSPGTNISHDGGHITCPSNAMS 513

Query: 1946 DTHISPAVSVF-----------------TLEGTQSTNDGQIVSSTDGETLDPINTHQSSG 2074
            D H    +++                   + G+  +N   +V     E LD       S 
Sbjct: 514  DNHEMLDINIMDDKSFSDRLSTSISGSDAMLGSSDSNIYGMVDPRADELLDDSGATDVSP 573

Query: 2075 PADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVF-RHRP 2251
             +    P M+E+ LLL QAVE G+A+V D+D +DAD +Y+ +VS A+ +P GPVF +HR 
Sbjct: 574  LSRSAVPCMKEISLLLEQAVEQGSALVLDKDSLDADNIYQTTVSFAKSAPLGPVFMKHR- 632

Query: 2252 KKVVINKSENQETEEDRVQEAVPVADRKPKEPS-------RSKTDTRKLKGLPRNYGSVA 2410
             KVV+ K   QE     + +       K +E +       R  +  R+ +     + +V 
Sbjct: 633  -KVVVQKRVKQEAPTSEISDKQEARTLKTRETTAVTTKGKRENSPIRRRENFDERFQNVV 691

Query: 2411 PKGSLGVDEIAKLL 2452
            P+G+LGVDE+AKLL
Sbjct: 692  PQGTLGVDELAKLL 705


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
            gi|482565819|gb|EOA30008.1| hypothetical protein
            CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  543 bits (1400), Expect = e-151
 Identities = 314/755 (41%), Positives = 423/755 (56%), Gaps = 12/755 (1%)
 Frame = +2

Query: 227  TPFPIFAPPAQYXXXXXXXXXXEVRFSRWNNANAEKFNRQQRNLKEIEDDLRRHRRYQSA 406
            TPFPIFAP              E+RFSRW NANAE+F +++R+ +E+E ++RR RR+ +A
Sbjct: 7    TPFPIFAP--SLFPNPNPRAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRDRRFDAA 64

Query: 407  LSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSMATNHPA 586
              I                                          P  +S +S   + P 
Sbjct: 65   TKIVHTHDSDAAASESKTSPFRSRGTPSLPSARSI----------PGRRSKYSKPDSGPN 114

Query: 587  FRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLALREP 766
              K + R   +    + + E   +++ + G+SYV+ GAPFE+ YSYTETPK KPL LREP
Sbjct: 115  KPKNKPRVPDSPPQLDAKAE---VKLSEDGLSYVINGAPFEFKYSYTETPKVKPLKLREP 171

Query: 767  PMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQRPGPFLPGSGPKY 943
               PFGP TM RPWTGR           +FDSF  PP  KKG+KPVQ+PGPF PG GP+Y
Sbjct: 172  AYAPFGPTTMGRPWTGRAPLPQSQKTPRDFDSFRLPPVGKKGVKPVQKPGPFRPGIGPRY 231

Query: 944  VWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVCKIKC 1123
            V+++                     K++RQLNMGRDGLTHNML+NIH  WKRRRVCKIKC
Sbjct: 232  VYTKEEILGEPLTKEEIRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKC 291

Query: 1124 KGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVSPVYP 1303
            KGVCTVDMDN+C+QLEEK GGK+IYRRGG +FLFRGRNYN+RTRP+FPLMLWKPV+PVYP
Sbjct: 292  KGVCTVDMDNICEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYP 351

Query: 1304 RLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRIDCQG 1483
            +L++++P+GLT  EA+EMRRKGR+L+PICKL KNGVY DLV +V+EAFE CELVRIDCQG
Sbjct: 352  KLIQQVPEGLTRLEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQG 411

Query: 1484 MNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXXXXXX 1663
            +  SD++KIG KLKDLVPCVLISFENE IL+WRGREW+SS                    
Sbjct: 412  LKASDFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSS-------------------- 451

Query: 1664 XXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAENADS 1843
                                      L    ++   L D    + L   ++  S +   +
Sbjct: 452  --------------------------LTTPDKKDDYLRDIEVDTALPEDDEPSSPDQPQT 485

Query: 1844 SITGNTSSSIEEDEESVAFGNKGDVSNTGPYAQDDTHISPAVSVFTLEGTQSTNDGQIVS 2023
             I  +   S+E   ++   G+    S     A + T  S ++   + + T+ T D  +  
Sbjct: 486  VIQNSPLGSME--SQNNPDGHDLSPSTVDFLAMEGT--SSSLRSLSTDVTELTADSSL-- 539

Query: 2024 STDGETLDPINTHQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSV 2203
               G+  +P    + S   ++ +  ++ VL L+ QAVESG A+V D   +DAD V+ ++V
Sbjct: 540  ---GDDQEPEPEPEKS--EEISKQSIERVLNLMNQAVESGTALVLDSTELDADTVFAKAV 594

Query: 2204 SLARVSPAGPVFRH-RPKKVVINKSENQE----TEEDRVQEAVPVADR------KPKEPS 2350
            + + V+  GP F+H   K+ ++ K E +E    + E +V   V    +      K +E  
Sbjct: 595  AFSAVAAPGPAFQHGLRKQPMVKKQEKRESGYRSVEAKVSNVVVTVKKEVAFSVKREEKE 654

Query: 2351 RSKTDTRKLKGLPRNYGSVAPKGSLGVDEIAKLLA 2455
                  +K+     +Y  V P G+L VDE+AKLLA
Sbjct: 655  EEGGLKKKIDEFDEDYREVLPHGTLKVDELAKLLA 689


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus clementina]
            gi|557554477|gb|ESR64491.1| hypothetical protein
            CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  543 bits (1398), Expect = e-151
 Identities = 277/485 (57%), Positives = 330/485 (68%), Gaps = 12/485 (2%)
 Frame = +2

Query: 185  KLRSLTMALIRPTVTPFPIFAPPAQYXXXXXXXXXX-----EVRFSRWNNANAEKFNRQQ 349
            +L S  MAL    + PFPIF+PP  +               E+RFSRWNNANAE+FN+++
Sbjct: 1    QLASQIMAL--KLIIPFPIFSPPPNHNPNLNPNPPNHRPATEIRFSRWNNANAEEFNQRR 58

Query: 350  RNLKEIEDDLRRHRRYQSALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXX 529
            R  +EIEDD+RRHRR+ SA  I                                      
Sbjct: 59   RAQQEIEDDIRRHRRFDSATKITQSYDSSTSTATNG-----------VAFKSAGTPSSPS 107

Query: 530  XXXNPNTKSPFSM-ATN----HPAFRKVRTRPIPTKEAAEGEG-EPLDIRVVQGGVSYVV 691
                P  KS +S  ATN    HPAFRK+  R   T ++ E       +I + + G+SYV+
Sbjct: 108  RPSIPGRKSKYSKPATNSSVDHPAFRKISKREKTTNKSPEKPAASKSNISITEDGLSYVI 167

Query: 692  PGAPFEYMYSYTETPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTA 871
             GAPFE+ YSYTE PKAKPL LRE   +PFGP TM RPWTGR           EFDSF  
Sbjct: 168  DGAPFEFKYSYTEAPKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQL 227

Query: 872  PP-SKKGMKPVQRPGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGR 1048
            PP +KKG+KPVQ+PGP+LPG+GP+YV +R                    ++SSRQLNMGR
Sbjct: 228  PPPNKKGVKPVQKPGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGR 287

Query: 1049 DGLTHNMLDNIHSHWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFR 1228
            DGLTHNMLDNIH+HWKRRR CKIKCKGVCTVDMDNVC+QLEE+TGGKIIYRRGG ++LFR
Sbjct: 288  DGLTHNMLDNIHAHWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFR 347

Query: 1229 GRNYNYRTRPQFPLMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNG 1408
            GRNYNYR RP FPLMLWKP++PVYPRL++++PDGLTL+EA+EMR+KGR LIPICKL KNG
Sbjct: 348  GRNYNYRNRPHFPLMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNG 407

Query: 1409 VYVDLVADVREAFEACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGR 1588
            VY DL  +VREAFE CELVRI+CQGMN SDY+KIG KL+DLVPCVLISFE EHIL+WRG+
Sbjct: 408  VYCDLAKNVREAFEVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQ 467

Query: 1589 EWESS 1603
            EW+SS
Sbjct: 468  EWKSS 472



 Score = 80.1 bits (196), Expect = 4e-12
 Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
 Frame = +2

Query: 1721 SSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAENADSSITGNTSSSIEEDEE-SVA 1897
            +S++   +M   E  S    + + S  +    E  ++  +S +  +TS  + +  E    
Sbjct: 596  ASDSTTNVMEINETISATGCSNDKSDAMKNIFENVSKLENSGVGNDTSEPVSDTNECQTV 655

Query: 1898 FGNKGDVSNTGPYAQDDTHISPAVSV---FTLEGTQSTNDGQIVSSTDGETLDPINTHQS 2068
              NKG V             S A+SV    TL   +ST D Q      G        + S
Sbjct: 656  LDNKGSVLGE----------SAALSVGSETTLGSAESTRD-QSEHFYVGSLNHDYQQNPS 704

Query: 2069 SGPAD------LEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAG 2230
              P D      L  P ++ VL L+RQAVE+G+A+V D+  +DAD +YERSV+ A+ +P G
Sbjct: 705  EVPEDHNVLTRLHGPSLEIVLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPG 764

Query: 2231 PVFRHRPKKVVINKSENQETEEDRVQEAVP 2320
            PVF+ R +K+ I K E +E    +++  VP
Sbjct: 765  PVFQQRSRKIAIQKGEKKEAGHLKMKREVP 794


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
            sinensis]
          Length = 837

 Score =  541 bits (1395), Expect = e-151
 Identities = 272/472 (57%), Positives = 324/472 (68%), Gaps = 12/472 (2%)
 Frame = +2

Query: 224  VTPFPIFAPPAQYXXXXXXXXXX-----EVRFSRWNNANAEKFNRQQRNLKEIEDDLRRH 388
            + PFPIF+PP  +               E+RFSRWNNANAE+FN+++R  +EIEDD+RRH
Sbjct: 6    IIPFPIFSPPPNHNPNLNPNPPNHRPATEIRFSRWNNANAEEFNQRRRAQQEIEDDIRRH 65

Query: 389  RRYQSALSIAXXXXXXXXXXXXSGFXXXXXXXXXXXXXXXXXXXXXXXXXNPNTKSPFSM 568
            RR+ SA  I                                          P  KS +S 
Sbjct: 66   RRFDSATKITQSYDSSTSTATNG-----------VAFKSAGTPSSPSRPSIPGRKSKYSK 114

Query: 569  -ATN----HPAFRKVRTRPIPTKEAAEGEG-EPLDIRVVQGGVSYVVPGAPFEYMYSYTE 730
             ATN    HPAFRK+  R   T ++ E       +I + + G+SYV+ GAPFE+ YSYTE
Sbjct: 115  PATNSSVDHPAFRKISKREKTTNKSPEKPAASKSNISITEDGLSYVIDGAPFEFKYSYTE 174

Query: 731  TPKAKPLALREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPP-SKKGMKPVQR 907
             PKAKPL LRE   +PFGP TM RPWTGR           EFDSF  PP +KKG+KPVQ+
Sbjct: 175  APKAKPLKLREAAFSPFGPTTMGRPWTGRAPLPPSKKKLKEFDSFQLPPPNKKGVKPVQK 234

Query: 908  PGPFLPGSGPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHS 1087
            PGP+LPG+GP+YV +R                    ++SSRQLNMGRDGLTHNMLDNIH+
Sbjct: 235  PGPYLPGTGPRYVSTREEILGEPLTAEEVRELVESVKRSSRQLNMGRDGLTHNMLDNIHA 294

Query: 1088 HWKRRRVCKIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFP 1267
            HWKRRR CKIKCKGVCTVDMDNVC+QLEE+TGGKIIYRRGG ++LFRGRNYNYR RP FP
Sbjct: 295  HWKRRRACKIKCKGVCTVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFP 354

Query: 1268 LMLWKPVSPVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAF 1447
            LMLWKP++PVYPRL++++PDGLTL+EA+EMR+KGR LIPICKL KNGVY DL  +VREAF
Sbjct: 355  LMLWKPITPVYPRLIQQVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREAF 414

Query: 1448 EACELVRIDCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESS 1603
            E CELVRI+CQGMN SDY+KIG KL+DLVPCVLISFE EHIL+WRG+EW+SS
Sbjct: 415  EVCELVRINCQGMNGSDYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSS 466



 Score = 94.7 bits (234), Expect = 2e-16
 Identities = 78/259 (30%), Positives = 125/259 (48%), Gaps = 14/259 (5%)
 Frame = +2

Query: 1721 SSEANLTLMVGREEGSQLEDNTESSPLLSAEQEISAENADSSITGNTSSSIEEDEE-SVA 1897
            +S++   +M   E  S    + + S  +    E  ++  +S +  +TS  + +  E    
Sbjct: 590  ASDSTTNVMEINETISATGCSNDKSDAMKNIFENVSKLENSGVGNDTSEPVSDTNECQTV 649

Query: 1898 FGNKGDVSNTGPYAQDDTHISPAVSV---FTLEGTQSTNDGQIVSSTDGETLDPINTHQS 2068
              NKG V             S A+SV    TL   +ST D Q      G        + S
Sbjct: 650  LDNKGSVLGE----------SAALSVGSETTLGSAESTRD-QSEHFYVGSLNHDYQQNPS 698

Query: 2069 SGPAD------LEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAG 2230
              P D      L  P ++ VL L+RQAVE+G+A+V D+  +DAD +YERSV+ A+ +P G
Sbjct: 699  EVPEDHNVLTRLHGPSLEIVLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPG 758

Query: 2231 PVFRHRPKKVVINKSENQETEEDRVQEAVP---VADRKPKEPSRSKTDTRKLKGLPRNYG 2401
            PVF+ R +K+ I K E +E    +++  VP   V++ +      ++  T+    +     
Sbjct: 759  PVFQQRSRKIAIQKGEKKEAGHLKMKREVPNMVVSENRGNVRQSNRKKTKNSDEIEHGLD 818

Query: 2402 SV-APKGSLGVDEIAKLLA 2455
             V +P+GSL +DE+AKLLA
Sbjct: 819  VVLSPQGSLKIDELAKLLA 837


>ref|XP_003532480.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Glycine max]
          Length = 723

 Score =  533 bits (1374), Expect = e-148
 Identities = 303/676 (44%), Positives = 386/676 (57%), Gaps = 50/676 (7%)
 Frame = +2

Query: 575  NHPAFRKVRTRPIPTKEAAEGEGEPLDIRVVQGGVSYVVPGAPFEYMYSYTETPKAKPLA 754
            +HPAFR      IP  +     G P ++++   G+SYV+ GAPFE+ YSYTETPK KP+ 
Sbjct: 69   SHPAFRFSN---IPKSKPQRVSGAPENVKISDDGLSYVIDGAPFEFKYSYTETPKVKPIK 125

Query: 755  LREPPMTPFGPQTMPRPWTGRXXXXXXXXXXXEFDSFTAPPS-KKGMKPVQRPGPFLPGS 931
            +RE P  PFGP TMPRPWTGR           EFDSF  PP  KKG+KPVQ PGP+L G+
Sbjct: 126  MREAPFVPFGPDTMPRPWTGRAPLPASKKKLKEFDSFVLPPPHKKGVKPVQSPGPYLAGT 185

Query: 932  GPKYVWSRXXXXXXXXXXXXXXXXXXXSRKSSRQLNMGRDGLTHNMLDNIHSHWKRRRVC 1111
            GP+YV SR                     K+ RQLN+GRDGLTHNMLDNIH+HWKRRR C
Sbjct: 186  GPRYVKSREEILGEPLTQEEIRDLVKSCMKAQRQLNIGRDGLTHNMLDNIHAHWKRRRAC 245

Query: 1112 KIKCKGVCTVDMDNVCQQLEEKTGGKIIYRRGGAVFLFRGRNYNYRTRPQFPLMLWKPVS 1291
            KI+CKGVCTVDMDNVC QLEE+TGGKII+R+GG ++LFRGRNYNY+TRP FPLMLWKPV 
Sbjct: 246  KIRCKGVCTVDMDNVCHQLEERTGGKIIHRKGGVLYLFRGRNYNYKTRPHFPLMLWKPVP 305

Query: 1292 PVYPRLVKRIPDGLTLDEASEMRRKGRDLIPICKLAKNGVYVDLVADVREAFEACELVRI 1471
            PVYPRLV+R+P+GLTL+EA++MR+KG  LIPICKL KNGVY DLV  VREAFE CELVRI
Sbjct: 306  PVYPRLVQRVPEGLTLEEATKMRQKGSTLIPICKLGKNGVYCDLVKTVREAFEECELVRI 365

Query: 1472 DCQGMNPSDYKKIGGKLKDLVPCVLISFENEHILVWRGREWESSFDVNASGNAESTINXX 1651
            +CQG+N SDY+KIG KL+DLVPC L+SFE EHIL+WRG  W+SS         ES     
Sbjct: 366  NCQGLNKSDYRKIGAKLRDLVPCTLLSFEYEHILMWRGPNWKSSIPDRGDDRKES----- 420

Query: 1652 XXXXXXXXXXXXXXXXXXXXXNESSEANLTLMVGREEGSQLEDNTESS-----PLLSAEQ 1816
                                  E S  +L +     E + L D + SS      L   E 
Sbjct: 421  ----KQIEVDHKNYKPLPSEALEFSAPSLQMNPLEHESNLLHDTSISSISSDVTLDKVEV 476

Query: 1817 EISAENADSSITGNT--------------------------------SSSIEEDEESVAF 1900
                EN+  S++G T                                S +I   +    F
Sbjct: 477  SYPNENSHQSMSGVTEVPSLTKIYDVETTNDSTDSYAEPEPRTSLIPSMTIPHYDSHAEF 536

Query: 1901 GNKGDVSNTG-PYAQDDTHISPAVSV------FTLEGTQSTNDGQIVSSTDGETLDPINT 2059
             +K    + G  +  D    S  +S        TL G+ ++ +G +V S   + LD +  
Sbjct: 537  SSKAMSESHGTEHIMDSKSCSDGLSASISGSHATLGGSDNSTNG-MVDSHSNKLLDALGE 595

Query: 2060 HQSSGPADLEQPYMQEVLLLLRQAVESGNAIVFDEDVVDADLVYERSVSLARVSPAGPVF 2239
               S       P M+ + LLL QAVE G+A+V D+D +DAD +Y+ +V+ A+ +P GP F
Sbjct: 596  EDVSQAPRSAAPSMKAIWLLLEQAVEKGSALVLDKDSLDADNIYQNTVAFAKSAPPGPAF 655

Query: 2240 RHRPKKVVINKSENQ-----ETEEDRVQEAVPVADRKPKEPSRSKTDTRKLKGLPRNYGS 2404
            R +  K V  K+  Q     ET+E  +       +   K P ++  D + L        +
Sbjct: 656  R-KNTKAVSQKNPKQEGSTLETKETTIDSMKRKKENSTKIPRKANFDDQLL--------N 706

Query: 2405 VAPKGSLGVDEIAKLL 2452
            V P+G+LGVDE+AKLL
Sbjct: 707  VVPQGTLGVDELAKLL 722


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