BLASTX nr result

ID: Rheum21_contig00001596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00001596
         (392 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]     100   2e-19
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G...    92   9e-17
gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indi...    92   9e-17
gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japoni...    92   9e-17
ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II tra...    91   1e-16
ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    91   1e-16
ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    91   1e-16
ref|XP_006681024.1| hypothetical protein BATDEDRAFT_20420 [Batra...    91   1e-16
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]                  91   1e-16
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]                  91   1e-16
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]        91   1e-16
ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II tra...    91   2e-16
dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Grou...    91   2e-16
dbj|BAG96101.1| unnamed protein product [Oryza sativa Japonica G...    91   2e-16
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra...    91   2e-16
ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II tra...    90   3e-16
ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|...    90   3e-16
ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [A...    90   4e-16
ref|NP_567724.1| mediator of RNA polymerase II transcription sub...    89   6e-16
ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutr...    89   6e-16

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score =  100 bits (250), Expect = 2e-19
 Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
 Frame = -1

Query: 344 VLRGLRTNICEFIDLKPADLEKAQRDLA-LSCSRKRCKSTYKGXXXXXXXXXXSFNDEVV 168
           V+RGLR  I + I L+P +L+KAQR LA L   +KR     K              ++V+
Sbjct: 183 VMRGLREKIDKLIGLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSF--LQEQVM 240

Query: 167 VVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           VVPHR EG F AKGK ++ +CT+NLVPGEA+YGE+LI V+N+DGTE EYRV +P
Sbjct: 241 VVPHRFEGFFNAKGK-KNILCTRNLVPGEALYGEKLIHVQNEDGTEVEYRVCDP 293


>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222630379|gb|EEE62511.1| hypothetical protein
           OsJ_17309 [Oryza sativa Japonica Group]
          Length = 309

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/57 (73%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 70  KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 125


>gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indica Group]
          Length = 269

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/57 (73%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 53  KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 108


>gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japonica Group]
           gi|52353729|gb|AAU44295.1| putative fibrillarin [Oryza
           sativa Japonica Group]
          Length = 351

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 42/57 (73%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 70  KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 125


>ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Oryza brachyantha]
          Length = 308

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +G+FIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 69  KVVVVPHKHDGIFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 124


>ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
           [Brachypodium distachyon]
          Length = 302

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ +SV+N+DGT+ EYRVWNP
Sbjct: 64  KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRVWNP 119


>ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
           [Brachypodium distachyon]
          Length = 302

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ +SV+N+DGT+ EYRVWNP
Sbjct: 64  KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRVWNP 119


>ref|XP_006681024.1| hypothetical protein BATDEDRAFT_20420 [Batrachochytrium
           dendrobatidis JAM81] gi|328768220|gb|EGF78267.1|
           hypothetical protein BATDEDRAFT_20420 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 329

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/57 (77%), Positives = 49/57 (85%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVV PHR EGVFIA GK ED +CTKNLVPGE+VYGE+ ISV N DGT+TEYRVWNP
Sbjct: 91  KVVVKPHRHEGVFIASGK-EDMLCTKNLVPGESVYGEKRISVDNADGTKTEYRVWNP 146


>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = -1

Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           ++VVV PHR  GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130


>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
          Length = 314

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = -1

Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           ++VVV PHR  GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130


>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
          Length = 314

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 44/58 (75%), Positives = 51/58 (87%)
 Frame = -1

Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           ++VVV PHR  GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74  NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130


>ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Solanum lycopersicum]
          Length = 314

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 44/57 (77%), Positives = 50/57 (87%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVV PHR  GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 75  KVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130


>dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group]
           gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza
           sativa Japonica Group] gi|125541665|gb|EAY88060.1|
           hypothetical protein OsI_09490 [Oryza sativa Indica
           Group] gi|125584186|gb|EAZ25117.1| hypothetical protein
           OsJ_08915 [Oryza sativa Japonica Group]
          Length = 306

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+  GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 67  KVVVVPHKHNGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 122


>dbj|BAG96101.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 227

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+  GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 67  KVVVVPHKHNGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 122


>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Solanum tuberosum]
          Length = 314

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 44/56 (78%), Positives = 49/56 (87%)
 Frame = -1

Query: 173 VVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           VVV PHR  GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 76  VVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130


>ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           36a-like [Oryza brachyantha]
          Length = 278

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 40/57 (70%), Positives = 52/57 (91%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVVVPH+ +G+FIAK K EDA+CT+N+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 39  KVVVVPHKHDGIFIAKAK-EDALCTRNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 94


>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
           gi|223547575|gb|EEF49070.1| fibrillarin, putative
           [Ricinus communis]
          Length = 247

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 42/57 (73%), Positives = 48/57 (84%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +VVV PHR EGVFI KG  EDA+ TKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 6   KVVVEPHRHEGVFIGKGGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 62


>ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [Amborella trichopoda]
           gi|548839426|gb|ERM99715.1| hypothetical protein
           AMTR_s00099p00093470 [Amborella trichopoda]
          Length = 245

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 42/57 (73%), Positives = 51/57 (89%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +V++ PHR EGVF+AKGK EDA+ TKNLVPGEAVYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 6   KVLIEPHRHEGVFVAKGK-EDALVTKNLVPGEAVYGEKRISVQNEDGTKEEYRVWNP 61


>ref|NP_567724.1| mediator of RNA polymerase II transcription subunit 36a
           [Arabidopsis thaliana]
           gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
           Full=Mediator of RNA polymerase II transcription subunit
           36a; AltName: Full=Fibrillarin-like protein 2; AltName:
           Full=Histone-glutamine methyltransferase; AltName:
           Full=rRNA 2'-O-methyltransferase fibrillarin 2
           gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
           [Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
           fibrillarin-like protein [Arabidopsis thaliana]
           gi|7269413|emb|CAB81373.1| fibrillarin-like protein
           [Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
           fibrillarin 2 [Arabidopsis thaliana]
           gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
           [Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
           fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
           gi|332659685|gb|AEE85085.1| mediator of RNA polymerase
           II transcription subunit 36a [Arabidopsis thaliana]
          Length = 320

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/57 (75%), Positives = 50/57 (87%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +V+V PHR  GVFIAKGK EDA+ TKNLVPGEAVY E+ ISV+N+DGT+TEYRVWNP
Sbjct: 79  KVIVEPHRHAGVFIAKGK-EDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNP 134


>ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutrema salsugineum]
           gi|557114458|gb|ESQ54741.1| hypothetical protein
           EUTSA_v10025746mg [Eutrema salsugineum]
          Length = 320

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 43/57 (75%), Positives = 50/57 (87%)
 Frame = -1

Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
           +V+V PHR  GVFIAKGK EDA+ TKNLVPGEAVY E+ ISV+N+DGT+TEYRVWNP
Sbjct: 79  KVIVEPHRHAGVFIAKGK-EDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNP 134


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