BLASTX nr result
ID: Rheum21_contig00001596
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00001596
(392 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] 100 2e-19
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G... 92 9e-17
gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indi... 92 9e-17
gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japoni... 92 9e-17
ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II tra... 91 1e-16
ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibri... 91 1e-16
ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibri... 91 1e-16
ref|XP_006681024.1| hypothetical protein BATDEDRAFT_20420 [Batra... 91 1e-16
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] 91 1e-16
emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana] 91 1e-16
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum] 91 1e-16
ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II tra... 91 2e-16
dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Grou... 91 2e-16
dbj|BAG96101.1| unnamed protein product [Oryza sativa Japonica G... 91 2e-16
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra... 91 2e-16
ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II tra... 90 3e-16
ref|XP_002513667.1| fibrillarin, putative [Ricinus communis] gi|... 90 3e-16
ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [A... 90 4e-16
ref|NP_567724.1| mediator of RNA polymerase II transcription sub... 89 6e-16
ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutr... 89 6e-16
>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
Length = 475
Score = 100 bits (250), Expect = 2e-19
Identities = 58/114 (50%), Positives = 76/114 (66%), Gaps = 1/114 (0%)
Frame = -1
Query: 344 VLRGLRTNICEFIDLKPADLEKAQRDLA-LSCSRKRCKSTYKGXXXXXXXXXXSFNDEVV 168
V+RGLR I + I L+P +L+KAQR LA L +KR K ++V+
Sbjct: 183 VMRGLREKIDKLIGLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSF--LQEQVM 240
Query: 167 VVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
VVPHR EG F AKGK ++ +CT+NLVPGEA+YGE+LI V+N+DGTE EYRV +P
Sbjct: 241 VVPHRFEGFFNAKGK-KNILCTRNLVPGEALYGEKLIHVQNEDGTEVEYRVCDP 293
>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630379|gb|EEE62511.1| hypothetical protein
OsJ_17309 [Oryza sativa Japonica Group]
Length = 309
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 70 KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 125
>gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indica Group]
Length = 269
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 53 KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 108
>gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japonica Group]
gi|52353729|gb|AAU44295.1| putative fibrillarin [Oryza
sativa Japonica Group]
Length = 351
Score = 91.7 bits (226), Expect = 9e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 70 KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 125
>ref|XP_006648138.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Oryza brachyantha]
Length = 308
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +G+FIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 69 KVVVVPHKHDGIFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 124
>ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
[Brachypodium distachyon]
Length = 302
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ +SV+N+DGT+ EYRVWNP
Sbjct: 64 KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRVWNP 119
>ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
[Brachypodium distachyon]
Length = 302
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/57 (71%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +GVFIAK K EDA+CTKN+VPGE+VYGE+ +SV+N+DGT+ EYRVWNP
Sbjct: 64 KVVVVPHKHDGVFIAKAK-EDALCTKNMVPGESVYGEKRVSVQNEDGTKVEYRVWNP 119
>ref|XP_006681024.1| hypothetical protein BATDEDRAFT_20420 [Batrachochytrium
dendrobatidis JAM81] gi|328768220|gb|EGF78267.1|
hypothetical protein BATDEDRAFT_20420 [Batrachochytrium
dendrobatidis JAM81]
Length = 329
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/57 (77%), Positives = 49/57 (85%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVV PHR EGVFIA GK ED +CTKNLVPGE+VYGE+ ISV N DGT+TEYRVWNP
Sbjct: 91 KVVVKPHRHEGVFIASGK-EDMLCTKNLVPGESVYGEKRISVDNADGTKTEYRVWNP 146
>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -1
Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
++VVV PHR GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74 NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130
>emb|CAK32531.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -1
Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
++VVV PHR GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74 NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130
>dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/58 (75%), Positives = 51/58 (87%)
Frame = -1
Query: 179 DEVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
++VVV PHR GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 74 NKVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130
>ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum lycopersicum]
Length = 314
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/57 (77%), Positives = 50/57 (87%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVV PHR GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 75 KVVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130
>dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group]
gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza
sativa Japonica Group] gi|125541665|gb|EAY88060.1|
hypothetical protein OsI_09490 [Oryza sativa Indica
Group] gi|125584186|gb|EAZ25117.1| hypothetical protein
OsJ_08915 [Oryza sativa Japonica Group]
Length = 306
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 67 KVVVVPHKHNGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 122
>dbj|BAG96101.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 90.9 bits (224), Expect = 2e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ GVFIAK K EDA+CTKN+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 67 KVVVVPHKHNGVFIAKAK-EDALCTKNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 122
>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum tuberosum]
Length = 314
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -1
Query: 173 VVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
VVV PHR GVFIAKGK EDA+CTKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 76 VVVEPHRHGGVFIAKGK-EDALCTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 130
>ref|XP_006655045.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Oryza brachyantha]
Length = 278
Score = 90.1 bits (222), Expect = 3e-16
Identities = 40/57 (70%), Positives = 52/57 (91%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVVVPH+ +G+FIAK K EDA+CT+N+VPGE+VYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 39 KVVVVPHKHDGIFIAKAK-EDALCTRNMVPGESVYGEKRISVQNEDGTKVEYRVWNP 94
>ref|XP_002513667.1| fibrillarin, putative [Ricinus communis]
gi|223547575|gb|EEF49070.1| fibrillarin, putative
[Ricinus communis]
Length = 247
Score = 90.1 bits (222), Expect = 3e-16
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+VVV PHR EGVFI KG EDA+ TKNLVPGEAVY E+ ISV+N+DGT+ EYRVWNP
Sbjct: 6 KVVVEPHRHEGVFIGKGGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYRVWNP 62
>ref|XP_006836862.1| hypothetical protein AMTR_s00099p00093470 [Amborella trichopoda]
gi|548839426|gb|ERM99715.1| hypothetical protein
AMTR_s00099p00093470 [Amborella trichopoda]
Length = 245
Score = 89.7 bits (221), Expect = 4e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+V++ PHR EGVF+AKGK EDA+ TKNLVPGEAVYGE+ ISV+N+DGT+ EYRVWNP
Sbjct: 6 KVLIEPHRHEGVFVAKGK-EDALVTKNLVPGEAVYGEKRISVQNEDGTKEEYRVWNP 61
>ref|NP_567724.1| mediator of RNA polymerase II transcription subunit 36a
[Arabidopsis thaliana]
gi|67461067|sp|Q94AH9.2|MD36A_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
36a; AltName: Full=Fibrillarin-like protein 2; AltName:
Full=Histone-glutamine methyltransferase; AltName:
Full=rRNA 2'-O-methyltransferase fibrillarin 2
gi|9965655|gb|AAG10104.1|AF233444_1 fibrillarin 2
[Arabidopsis thaliana] gi|4914455|emb|CAB43694.1|
fibrillarin-like protein [Arabidopsis thaliana]
gi|7269413|emb|CAB81373.1| fibrillarin-like protein
[Arabidopsis thaliana] gi|9965796|gb|AAG10153.1|
fibrillarin 2 [Arabidopsis thaliana]
gi|21536840|gb|AAM61172.1| fibrillarin 2 (AtFib2)
[Arabidopsis thaliana] gi|23297150|gb|AAN13105.1|
fibrillarin 2 (AtFib2) [Arabidopsis thaliana]
gi|332659685|gb|AEE85085.1| mediator of RNA polymerase
II transcription subunit 36a [Arabidopsis thaliana]
Length = 320
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+V+V PHR GVFIAKGK EDA+ TKNLVPGEAVY E+ ISV+N+DGT+TEYRVWNP
Sbjct: 79 KVIVEPHRHAGVFIAKGK-EDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNP 134
>ref|XP_006413288.1| hypothetical protein EUTSA_v10025746mg [Eutrema salsugineum]
gi|557114458|gb|ESQ54741.1| hypothetical protein
EUTSA_v10025746mg [Eutrema salsugineum]
Length = 320
Score = 89.0 bits (219), Expect = 6e-16
Identities = 43/57 (75%), Positives = 50/57 (87%)
Frame = -1
Query: 176 EVVVVPHRIEGVFIAKGKNEDAICTKNLVPGEAVYGEELISVKNKDGTETEYRVWNP 6
+V+V PHR GVFIAKGK EDA+ TKNLVPGEAVY E+ ISV+N+DGT+TEYRVWNP
Sbjct: 79 KVIVEPHRHAGVFIAKGK-EDALVTKNLVPGEAVYNEKRISVQNEDGTKTEYRVWNP 134