BLASTX nr result
ID: Rheum21_contig00001593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00001593
(475 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like i... 79 8e-13
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [... 79 8e-13
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like i... 79 8e-13
ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [... 77 2e-12
emb|CBI31382.3| unnamed protein product [Vitis vinifera] 77 2e-12
ref|XP_002532622.1| Far upstream element-binding protein, putati... 76 5e-12
ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [... 75 7e-12
gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus... 75 9e-12
ref|XP_003638174.1| RNA-binding protein Nova-2 [Medicago truncat... 75 9e-12
gb|ABQ23585.1| putative KH-domain containing protein [Medicago t... 75 9e-12
ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [... 75 1e-11
gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [The... 75 1e-11
gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao] 75 1e-11
gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [The... 75 1e-11
ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like i... 74 2e-11
ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like i... 74 2e-11
ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [... 73 3e-11
gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| un... 73 3e-11
emb|CAA54960.1| transcribed sequence 1087 [Zea mays] 73 3e-11
ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like i... 72 6e-11
>ref|XP_006589354.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Glycine max]
Length = 332
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTERG 332
GARIKISD+GD++ GT+DRKVTITGS RAIRTAE+MILQKVA TERG
Sbjct: 282 GARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATERG 329
>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-2-like [Glycine max]
Length = 337
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTERG 332
GARIKISD+GD++ GT+DRKVTITGS RAIRTAE+MILQKVA TERG
Sbjct: 287 GARIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATERG 334
>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Glycine max]
Length = 337
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/48 (81%), Positives = 44/48 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTERG 332
GARIKISD+GD++ GT+DRKVTITGS RAIRTAE+MILQKVA TERG
Sbjct: 287 GARIKISDRGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATERG 334
>ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MI+QKVAS +ER
Sbjct: 263 GARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 309
>emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MI+QKVAS +ER
Sbjct: 311 GARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMIMQKVASASER 357
>ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding
protein, putative [Ricinus communis]
Length = 314
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/48 (77%), Positives = 42/48 (87%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTERG 332
GARIKISD+GDFM GT+DRK+ ITGS RAIRTAE MI+QKVA +ERG
Sbjct: 265 GARIKISDRGDFMSGTNDRKIIITGSQRAIRTAEGMIMQKVAYASERG 312
>ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding
protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 75.5 bits (184), Expect = 7e-12
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MILQKVA +ER
Sbjct: 276 GARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASER 322
>gb|ESW16249.1| hypothetical protein PHAVU_007G141100g [Phaseolus vulgaris]
Length = 335
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GD++ GT+DRKVTITG+ RAIRTAE+MILQKVA TER
Sbjct: 286 GARIKISDRGDYISGTTDRKVTITGAQRAIRTAESMILQKVAYATER 332
>ref|XP_003638174.1| RNA-binding protein Nova-2 [Medicago truncatula]
gi|355504109|gb|AES85312.1| RNA-binding protein Nova-2
[Medicago truncatula]
Length = 126
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GA+IKISD+GD++ GT+DRKVTITGS RAIRTAE+MILQKVA TER
Sbjct: 78 GAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 124
>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GA+IKISD+GD++ GT+DRKVTITGS RAIRTAE+MILQKVA TER
Sbjct: 286 GAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATER 332
>ref|XP_006360517.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum tuberosum]
Length = 328
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/47 (78%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDF+ GTSDRKVTITGS RAIRTAE+MI QK+A+V+ R
Sbjct: 281 GARIKISDRGDFLSGTSDRKVTITGSQRAIRTAESMISQKIATVSVR 327
>gb|EOY18878.1| Binding to TOMV RNA 1L (long form) isoform 6 [Theobroma cacao]
Length = 314
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MI+QKVA T+R
Sbjct: 265 GARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 311
>gb|EOY18874.1| Binding to TOMV RNA 1L isoform 2 [Theobroma cacao]
Length = 334
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MI+QKVA T+R
Sbjct: 285 GARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 331
>gb|EOY18873.1| Binding to TOMV RNA 1L (long form) isoform 1 [Theobroma cacao]
gi|508726978|gb|EOY18875.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
gi|508726979|gb|EOY18876.1| Binding to TOMV RNA 1L (long
form) isoform 1 [Theobroma cacao]
Length = 313
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDFM GT+DRKVTITGS RAIR AE+MI+QKVA T+R
Sbjct: 264 GARIKISDRGDFMSGTTDRKVTITGSQRAIRQAESMIMQKVAYATDR 310
>ref|XP_004496142.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Cicer
arietinum]
Length = 315
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GA+IKISD+GD++ GT+DRKVTITGS RAIRTAE+MI+QKVA TER
Sbjct: 266 GAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATER 312
>ref|XP_004496141.1| PREDICTED: RNA-binding protein Nova-2-like isoform X1 [Cicer
arietinum]
Length = 337
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GA+IKISD+GD++ GT+DRKVTITGS RAIRTAE+MI+QKVA TER
Sbjct: 288 GAKIKISDRGDYISGTTDRKVTITGSQRAIRTAESMIMQKVAYATER 334
>ref|XP_004250025.1| PREDICTED: RNA-binding protein Nova-2-like [Solanum lycopersicum]
Length = 328
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GDF+ GTSDRKVTITGS RAIRTAE+MI +KVA+++ R
Sbjct: 281 GARIKISDRGDFLSGTSDRKVTITGSQRAIRTAESMISRKVATISVR 327
>gb|ACN28670.1| unknown [Zea mays] gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087
protein [Zea mays]
Length = 344
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/47 (72%), Positives = 44/47 (93%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GD++ GTSDRKVTITG+P AIRTAE+MI+Q+V++ +ER
Sbjct: 298 GARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 344
>emb|CAA54960.1| transcribed sequence 1087 [Zea mays]
Length = 228
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/47 (72%), Positives = 44/47 (93%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTER 335
GARIKISD+GD++ GTSDRKVTITG+P AIRTAE+MI+Q+V++ +ER
Sbjct: 182 GARIKISDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 228
>ref|XP_006345845.1| PREDICTED: RNA-binding protein Nova-2-like isoform X2 [Solanum
tuberosum]
Length = 326
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = -1
Query: 475 GARIKISDKGDFMLGTSDRKVTITGSPRAIRTAENMILQKVASVTE 338
GARIKISD+GDFM GTSDRKVTITGS RAI AE+MI +KVA+VTE
Sbjct: 280 GARIKISDRGDFMSGTSDRKVTITGSQRAISIAESMISKKVATVTE 325