BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00000846
         (1672 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Popu...   597   e-168
ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [...   592   e-166
gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]           592   e-166
ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   588   e-165
ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like...   585   e-164
ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citr...   585   e-164
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   582   e-163
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   578   e-162
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              573   e-161
gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus...   568   e-159
gb|EOY22575.1| Pseudouridine synthase family protein isoform 2 [...   568   e-159
ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [...   568   e-159
ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like...   567   e-159
ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Gly...   560   e-157
ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [...   555   e-155
gb|EOY22574.1| Pseudouridine synthase family protein isoform 1 [...   553   e-154
ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatul...   552   e-154
ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [...   547   e-153
sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase ...   545   e-152
gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indi...   544   e-152

>ref|XP_002321729.2| hypothetical protein POPTR_0015s11340g [Populus trichocarpa]
            gi|550322484|gb|EEF05856.2| hypothetical protein
            POPTR_0015s11340g [Populus trichocarpa]
          Length = 388

 Score =  597 bits (1539), Expect = e-168
 Identities = 269/373 (72%), Positives = 324/373 (86%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP ++DYIFR+GRRHV+PY+FEFI+HVKNRWAGKTIVDLFA+EFKGRPYD
Sbjct: 16   MEIVWQTPANPPEKHDYIFRDGRRHVRPYHFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 75

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD + V + Y VK+SQKISHF+HRHEPPVMAWDV +L +E++VVT++K
Sbjct: 76   YYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFVHRHEPPVMAWDVPILDKEDDVVTVWK 135

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PA+VPVHPCGQYRKNTVVG+L+AEHGL PLFP+HRLDRLVSGLLI+AR+A++AD FR++I
Sbjct: 136  PATVPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEI 195

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAG VQKQY+AKV+GVFPE E +VD NVNYNAREG+STVEVG+ C  +P+KGK ACTKF 
Sbjct: 196  EAGKVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGSPIKGKTACTKFT 255

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG +SI+LC+P+TGRTHQIRVHLQ+  HPIAND+LYL+E VT RSSEG  ADRAA 
Sbjct: 256  RIGTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRAAH 315

Query: 972  NMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPG 1151
            +  NC   P + + +  E+   EDF IDPMCTNCPNL PKGYDGHEE LWLHCV+Y+G G
Sbjct: 316  SPNNC-LVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSG 374

Query: 1152 WTYECPYPEWATL 1190
            W Y+CPYP+WA L
Sbjct: 375  WVYQCPYPDWAVL 387


>ref|XP_004297513.1| PREDICTED: RNA pseudourine synthase 7-like [Fragaria vesca subsp.
            vesca]
          Length = 383

 Score =  592 bits (1527), Expect = e-166
 Identities = 277/373 (74%), Positives = 317/373 (84%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ+P++PP R DYIFR GRRHV+PYYFEFIAHVKNRWAGKTIVDLF DEFKGR  D
Sbjct: 10   MEIVWQSPANPPERKDYIFRNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFTDEFKGRNRD 69

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YY+ AVKCGRI+VD Q V + + VK SQKISHFLHRHEPPVM WDV +LQ E +VVTI K
Sbjct: 70   YYISAVKCGRIQVDGQLVPVSFIVKPSQKISHFLHRHEPPVMTWDVKILQTEPDVVTICK 129

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTVVGIL+AEHGL PLFPIHRLDRLVSGLLI+ARSA++AD FR+QI
Sbjct: 130  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSAAQADIFRQQI 189

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            E G+V KQYIA+V+G FPE E VVDAN+++NAREG+S+ EVGD CSD P KGK ACTKF 
Sbjct: 190  EGGMVHKQYIARVIGEFPEEEQVVDANIDHNAREGRSSAEVGDSCSDAPTKGKTACTKFT 249

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ +NG  SI+LCEPVTGRTHQIRVHLQHA HPIAND+LYL++ V+ RS+EG  ADRAAA
Sbjct: 250  RISSNGIQSIVLCEPVTGRTHQIRVHLQHAGHPIANDMLYLSKHVSDRSAEGMGADRAAA 309

Query: 972  NMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPG 1151
            N  + PAS   K  +   ED  EDF IDPMCTNCP+LAPKGYD HEEALWLHC +Y+GPG
Sbjct: 310  NSDHSPASVVGKIKSTSHEDSSEDFSIDPMCTNCPSLAPKGYDYHEEALWLHCFRYSGPG 369

Query: 1152 WTYECPYPEWATL 1190
            W YECP+P+WA+L
Sbjct: 370  WVYECPHPDWASL 382


>gb|EXB54894.1| RNA pseudourine synthase 7 [Morus notabilis]
          Length = 399

 Score =  592 bits (1525), Expect = e-166
 Identities = 279/383 (72%), Positives = 323/383 (84%), Gaps = 2/383 (0%)
 Frame = +3

Query: 48   QQGEDIPAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFAD 227
            ++ E    M+IVWQ P++PP ++DYIFR GRRHV+PYYFEFIAHVK RWAGKTIVDLFA+
Sbjct: 17   EEEEKKKKMEIVWQTPANPPEKHDYIFRNGRRHVRPYYFEFIAHVKIRWAGKTIVDLFAE 76

Query: 228  EFKGRPYDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEE 407
            EFKGRPY+YYV AVKCGRI+VD + V + Y VK+SQKISHFLHRHEPPV+A DV VL +E
Sbjct: 77   EFKGRPYEYYVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVLALDVKVLHKE 136

Query: 408  EEVVTIYKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASK 587
             +VVT++KPAS PVHPCGQYRKNTVVGIL+AEH L P+FP+HRLDRLVSGLLI+AR+ASK
Sbjct: 137  PDVVTVWKPASAPVHPCGQYRKNTVVGILQAEHDLAPVFPVHRLDRLVSGLLILARNASK 196

Query: 588  ADSFRKQIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKG 767
            ADSFR+QIEAG VQKQY+A+V+GVFPE E VVD N+NYNAREG+ST EVGD C DTP+KG
Sbjct: 197  ADSFRQQIEAGKVQKQYVARVIGVFPEHEKVVDVNINYNAREGRSTAEVGDSCCDTPVKG 256

Query: 768  KAACTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEG 947
            KAA TKF R+ TNG  SI+LCEPVTGRTHQIRVHLQ+A HPIAND LYL+++   RS+EG
Sbjct: 257  KAASTKFTRIATNGIQSIVLCEPVTGRTHQIRVHLQYAGHPIANDTLYLSKEFVDRSTEG 316

Query: 948  TTADRAAANMGN--CPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALW 1121
            TTADRAAA +     P+S  D  +   EE   EDF IDPMCTNCPNL PKGYDG EE LW
Sbjct: 317  TTADRAAAGLDRSLSPSSGQD-FLRQNEESSTEDFCIDPMCTNCPNLGPKGYDGDEEGLW 375

Query: 1122 LHCVKYTGPGWTYECPYPEWATL 1190
            LHCV+Y+GPGW YECPYP+WATL
Sbjct: 376  LHCVRYSGPGWAYECPYPDWATL 398


>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  588 bits (1517), Expect = e-165
 Identities = 269/373 (72%), Positives = 319/373 (85%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP ++DYIFR+GRRHV+PYYFEFI+H KNRWAGKTIVDLFA+EFKGRPYD
Sbjct: 13   MEIVWQTPANPPEKHDYIFRDGRRHVRPYYFEFISHAKNRWAGKTIVDLFAEEFKGRPYD 72

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD + V + Y VK+SQKISHFLHRHEPPV AWD+ VL ++ +VVT+YK
Sbjct: 73   YYVSAVKCGRIQVDGETVPVSYIVKSSQKISHFLHRHEPPVTAWDIPVLYKDPDVVTVYK 132

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PA+VPVHPCGQYRKNTVVGIL+AEH L PLFP+HRLDRLVSGLLI+AR+A KAD FR++I
Sbjct: 133  PATVPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFRQEI 192

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAG+VQKQY+AKVVGVFPE E VV  N+NYNAREG+ST EVG+ C D+P KGK ACTKF 
Sbjct: 193  EAGMVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPPKGKTACTKFT 252

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG++SI+LC+P+TGRTHQIRVHLQ+  HPIAND LYL+E    RS+EG +ADRAA 
Sbjct: 253  RISTNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRAAC 312

Query: 972  NMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPG 1151
            +   C  +P D   +  EE+ V+DF IDPMCTNCPNLAPKGYD +EE LWLHCV+Y+GPG
Sbjct: 313  SSSYC-VTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPG 371

Query: 1152 WTYECPYPEWATL 1190
            W YECPYP+WA L
Sbjct: 372  WVYECPYPDWAIL 384


>ref|XP_006493250.1| PREDICTED: RNA pseudouridine synthase 7-like [Citrus sinensis]
          Length = 405

 Score =  585 bits (1508), Expect = e-164
 Identities = 276/374 (73%), Positives = 320/374 (85%), Gaps = 1/374 (0%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP + DYIFR+GRR+VKPYYFEFI+HVKNRWAGKTIVDLFA+EFKGRPYD
Sbjct: 37   MEIVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 96

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD++ V + Y VK+SQKISHFLHRHEPPVMAWDVS+LQ+E +V+T+ K
Sbjct: 97   YYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCK 156

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            P SVPVHPCGQYRKNTVVGIL+AEH   PLFP+HRLDRLVSGLLI+AR+ASKAD FR+QI
Sbjct: 157  PPSVPVHPCGQYRKNTVVGILQAEHDFAPLFPVHRLDRLVSGLLILARNASKADLFRQQI 216

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAG V K+YIA+V GVFPEGE VVD N+NYNA  G+ST E GD   DTPLKGKAACTKF 
Sbjct: 217  EAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFT 276

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG++SI+LCEP+TGRTHQIRVHLQ+  +PIAND+LYL E VT+R  EG +ADRAAA
Sbjct: 277  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSADRAAA 334

Query: 972  NMGNCPAS-PADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGP 1148
               + P    +DK+     E   EDF IDPMCTNCPNLAPKGY+GHEE LWLHCV+Y+GP
Sbjct: 335  YSHHSPPPVSSDKS-----ESSSEDFSIDPMCTNCPNLAPKGYEGHEEGLWLHCVRYSGP 389

Query: 1149 GWTYECPYPEWATL 1190
            GWTYECPYP+WATL
Sbjct: 390  GWTYECPYPDWATL 403


>ref|XP_006436898.1| hypothetical protein CICLE_v10031733mg [Citrus clementina]
            gi|557539094|gb|ESR50138.1| hypothetical protein
            CICLE_v10031733mg [Citrus clementina]
          Length = 399

 Score =  585 bits (1508), Expect = e-164
 Identities = 276/374 (73%), Positives = 321/374 (85%), Gaps = 1/374 (0%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP + DYIFR+GRR+VKPYYFEFI+HVKNRWAGKTIVDLFA+EFKGRPYD
Sbjct: 31   MEIVWQTPANPPVKEDYIFRDGRRNVKPYYFEFISHVKNRWAGKTIVDLFAEEFKGRPYD 90

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD++ V + Y VK+SQKISHFLHRHEPPVMAWDVS+LQ+E +V+T+ K
Sbjct: 91   YYVSAVKCGRIQVDEEMVPVSYTVKSSQKISHFLHRHEPPVMAWDVSILQKEPDVLTVCK 150

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            P SVPVHPCGQYRKNTVVGIL+AEH L PLFP+HRLDRLVSGLLI+AR+ASKAD FR+QI
Sbjct: 151  PPSVPVHPCGQYRKNTVVGILQAEHDLAPLFPVHRLDRLVSGLLILARNASKADLFRQQI 210

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAG V K+YIA+V GVFPEGE VVD N+NYNA  G+ST E GD   DTPLKGKAACTKF 
Sbjct: 211  EAGKVIKRYIARVNGVFPEGEQVVDVNINYNASAGRSTAESGDSLGDTPLKGKAACTKFT 270

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG++SI+LCEP+TGRTHQIRVHLQ+  +PIAND+LYL E VT+R  EG +ADRAAA
Sbjct: 271  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGYPIANDMLYLCEHVTHR--EGMSADRAAA 328

Query: 972  NMGNCPAS-PADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGP 1148
               + P    +DK+     E   EDF IDP+CTNCPNLAPKGY+GHEE LWLHCV+Y+GP
Sbjct: 329  YSHHSPPPVSSDKS-----ESSSEDFSIDPICTNCPNLAPKGYEGHEEGLWLHCVRYSGP 383

Query: 1149 GWTYECPYPEWATL 1190
            GWTYECPYP+WATL
Sbjct: 384  GWTYECPYPDWATL 397


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  582 bits (1500), Expect = e-163
 Identities = 272/379 (71%), Positives = 323/379 (85%), Gaps = 2/379 (0%)
 Frame = +3

Query: 57   EDIPAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFK 236
            ++   M+IVWQ P++PP R+DYIFR G+RHV+PYYFEFI+HVKNRWAGKTIVDLF +EFK
Sbjct: 6    DEAAEMEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFK 65

Query: 237  GRPYDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEV 416
            GRPYDYYV AV+ GRI+VD + V + Y V++SQKISHF+HRHEPPV+A DVSVLQ+E +V
Sbjct: 66   GRPYDYYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDV 125

Query: 417  VTIYKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADS 596
            +TI KPASVPVHPCGQYRKNTVVGIL+AEHGL PLFPIHRLDRLVSGLLI+ARSASKADS
Sbjct: 126  LTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADS 185

Query: 597  FRKQIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAA 776
            FR+QIEAG+VQKQYIAKV GVFP+ E VV+ NVNYNAREG+STVEVG+ C +TPLKGK+A
Sbjct: 186  FRQQIEAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSA 245

Query: 777  CTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTA 956
            CTKF R+ TNG++SI+LCEP+TGRTHQIRVHLQ+  HPIAND+LYL+E    RS++G +A
Sbjct: 246  CTKFTRISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSA 305

Query: 957  DRAAANMGNCPASPADKNI--NGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHC 1130
            DRAAAN G    S + K+     C+++   DF IDPMCTNCPNL PKGYD  EE LWLHC
Sbjct: 306  DRAAANSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHC 365

Query: 1131 VKYTGPGWTYECPYPEWAT 1187
            ++Y GP W YECP+PEWA+
Sbjct: 366  IRYCGPDWVYECPHPEWAS 384


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  578 bits (1490), Expect = e-162
 Identities = 274/372 (73%), Positives = 317/372 (85%), Gaps = 1/372 (0%)
 Frame = +3

Query: 78   IVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYDYY 257
            IVWQ P +PP R+DYIF  GRRHV+PYYFEFIAHVKNRWAGKTIVDLFA+EFKGRPY+YY
Sbjct: 21   IVWQTPDNPPQRSDYIFHNGRRHVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEYY 80

Query: 258  VRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYKPA 437
            V AV+CGRI+VD + V + Y VK+SQKISHFLHRHEPPVMAW V VL+EEEEV+T+ KPA
Sbjct: 81   VDAVECGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMAWGVKVLKEEEEVLTVCKPA 140

Query: 438  SVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQIEA 617
            SVPVHPCGQYRKNTVVGILEAEHGL PLFPIHRLDRLVSGLLI+AR+ASKAD FR+QIE+
Sbjct: 141  SVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARNASKADLFRQQIES 200

Query: 618  GLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFKRL 797
            GLV+KQYIA+VVGVFPE E VVDAN+NYN REG+ST E+ D  +DT  KGKAA TKF R+
Sbjct: 201  GLVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTRTKGKAAQTKFTRI 260

Query: 798  YTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAANM 977
             ++G +SI+ CEP+TGRTHQIRVHLQ+  +PIAND LYLT++ + RS + TTADRAAA  
Sbjct: 261  SSDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRSVQKTTADRAAAIS 320

Query: 978  GNCPASPADKN-INGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPGW 1154
               PA    ++  N C+E+  EDF IDPMCTNCPNLAPKGY+G EE LWLHCV+Y+GPGW
Sbjct: 321  FCSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGW 380

Query: 1155 TYECPYPEWATL 1190
             YECPYPEWA+L
Sbjct: 381  IYECPYPEWASL 392


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  573 bits (1477), Expect = e-161
 Identities = 270/374 (72%), Positives = 319/374 (85%), Gaps = 2/374 (0%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP R+DYIFR G+RHV+PYYFEFI+HVKNRWAGKTIVDLF +EFKGRPYD
Sbjct: 1    MEIVWQTPANPPERHDYIFRNGKRHVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRPYD 60

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AV+ GRI+VD + V + Y V++SQKISHF+HRHEPPV+A DVSVLQ+E +V+TI K
Sbjct: 61   YYVNAVQSGRIQVDGEMVPVSYIVRSSQKISHFVHRHEPPVLALDVSVLQKEPDVLTICK 120

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTVVGIL+AEHGL PLFPIHRLDRLVSGLLI+ARSASKADSFR+QI
Sbjct: 121  PASVPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQI 180

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAG+VQKQYIAKV GVFP+ E VV+ NVNYNAREG+ST  VG+ C +TPLKGK+ACTKF 
Sbjct: 181  EAGMVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRST--VGNCCGNTPLKGKSACTKFT 238

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG++SI+LCEP+TGRTHQIRVHLQ+  HPIAND+LYL+E    RS++G +ADRAAA
Sbjct: 239  RISTNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAA 298

Query: 972  NMGNCPASPADKNI--NGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTG 1145
            N G    S + K+     C+++   DF IDPMCTNCPNL PKGYD  EE LWLHC++Y G
Sbjct: 299  NSGCSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCG 358

Query: 1146 PGWTYECPYPEWAT 1187
            P W YECP+PEWA+
Sbjct: 359  PDWVYECPHPEWAS 372


>gb|ESW09863.1| hypothetical protein PHAVU_009G162600g [Phaseolus vulgaris]
          Length = 379

 Score =  568 bits (1465), Expect = e-159
 Identities = 270/381 (70%), Positives = 316/381 (82%)
 Frame = +3

Query: 48   QQGEDIPAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFAD 227
            ++GE+   MDIVWQ P++PPH  DY+FR G R V+PYYFEFIAHVKNRWAGKTIVDLFA+
Sbjct: 5    REGEE--GMDIVWQTPANPPHPQDYVFRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAE 62

Query: 228  EFKGRPYDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEE 407
            EFKGRPY+YYV AVKCGRI+VD + V + Y V+ SQKISHFLHRHEPPVMA DV +LQ+E
Sbjct: 63   EFKGRPYEYYVSAVKCGRIQVDGEMVPVSYVVRPSQKISHFLHRHEPPVMACDVLILQKE 122

Query: 408  EEVVTIYKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASK 587
             +V+TI KPASVPVHPCGQYRKNTVVGIL+AEHGL PLFP+HRLDRLVSGLLI+ARSA+K
Sbjct: 123  PDVLTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARSAAK 182

Query: 588  ADSFRKQIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKG 767
            AD FR+QIEAGLV KQYIAKVVG FPE EL+VDAN++YNAREG+ST EV D       KG
Sbjct: 183  ADIFRQQIEAGLVHKQYIAKVVGEFPEDELIVDANIDYNAREGRSTAEVRDSA-----KG 237

Query: 768  KAACTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEG 947
            KAA TKF R+ TNG+ SI+LCEP+TGRTHQIRVHLQ++ HPIAND+LY++E+   RS +G
Sbjct: 238  KAASTKFTRISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKG 297

Query: 948  TTADRAAANMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLH 1127
             +ADR+A           D+ +N CE +  EDF+IDPMCTNCPNL PKGYDG+EE LWLH
Sbjct: 298  LSADRSARISDVSLTPNFDEVLNACEANSNEDFIIDPMCTNCPNLEPKGYDGNEEGLWLH 357

Query: 1128 CVKYTGPGWTYECPYPEWATL 1190
            C  Y+GPGWTYECPYP+WA L
Sbjct: 358  CFCYSGPGWTYECPYPDWAKL 378


>gb|EOY22575.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
          Length = 396

 Score =  568 bits (1465), Expect = e-159
 Identities = 262/373 (70%), Positives = 312/373 (83%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            MDIVWQ P+HP H++DYIF  G+R+V+PYYFEF++HV  RW GKTIVDLF  EF+GRP D
Sbjct: 24   MDIVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDLFTQEFRGRPND 83

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD +N+ + Y+VK  QKISHF+HRHEPPVMAWDV++LQ E +V+T+ K
Sbjct: 84   YYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAILQNEPDVLTVCK 143

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTV+GIL+AEHGL+PL+PIHRLDRLVSGLLIVA++ +KAD FR+ I
Sbjct: 144  PASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKNPAKADIFRQHI 203

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFK 791
            EAGLVQKQY+AKV+GVFPE E VVDANV+YNAREG+ST EVG    DT LKGK ACTKF 
Sbjct: 204  EAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEVGISNGDTTLKGKVACTKFT 263

Query: 792  RLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAA 971
            R+ TNG +SI+LCEP TGRTHQIRVHLQ   HPIAND+LYL++ V  RS+ G TADRAAA
Sbjct: 264  RISTNGIHSIVLCEPTTGRTHQIRVHLQCTGHPIANDMLYLSDNVVDRSTLGMTADRAAA 323

Query: 972  NMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPG 1151
               +CP +  + N N   +   EDF IDPMC++CPNLAP GY+GHEE LWLHCV+Y+GPG
Sbjct: 324  LSCSCPVTSCE-NHNEEYKVSSEDFSIDPMCSHCPNLAPNGYNGHEEGLWLHCVRYSGPG 382

Query: 1152 WTYECPYPEWATL 1190
            W YECPYP+WA+L
Sbjct: 383  WVYECPYPDWASL 395


>ref|XP_004235304.1| PREDICTED: RNA pseudourine synthase 7-like [Solanum lycopersicum]
          Length = 383

 Score =  568 bits (1465), Expect = e-159
 Identities = 269/375 (71%), Positives = 319/375 (85%), Gaps = 2/375 (0%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP R+DYIFR G R+VKPYYFEFI+HVKNRWAGKTIVDLF+DEFKGRP D
Sbjct: 10   MEIVWQTPANPPERHDYIFRNGVRYVKPYYFEFISHVKNRWAGKTIVDLFSDEFKGRPRD 69

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YY  AVK GRI+VD + V++ Y V++SQKISHFLHRHEPPVM+WDV +L EE +V+T+ K
Sbjct: 70   YYESAVKSGRIQVDGRKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEPDVLTVCK 129

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTVVGIL+AE+GL PLFP+HRLDRLVSGLLI+ARSAS+AD FR+QI
Sbjct: 130  PASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRADLFRQQI 189

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGD--GCSDTPLKGKAACTK 785
            E+G+VQK+YIA+V+GVFPE + VV+ANVNYNAREG+STVEVGD  G S   LKGKAACTK
Sbjct: 190  ESGVVQKRYIARVIGVFPEKQQVVNANVNYNAREGRSTVEVGDNQGNSTASLKGKAACTK 249

Query: 786  FKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRA 965
            F R+ TNG  SI+LCEPVTGRTHQIRVHLQ+  HPIAND+LY++E V+ R++EG +ADRA
Sbjct: 250  FTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYMSEFVSSRAAEGLSADRA 309

Query: 966  AANMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTG 1145
            AA   +C         +  E D  EDF IDPMCTNCPNLAPKGY+G+EE LWLHCVKY+G
Sbjct: 310  AAK--SCSPPDPISRTSDMENDSNEDFSIDPMCTNCPNLAPKGYEGNEEGLWLHCVKYSG 367

Query: 1146 PGWTYECPYPEWATL 1190
            P W YECP+P+WA+L
Sbjct: 368  PDWIYECPHPDWASL 382


>ref|XP_006347631.1| PREDICTED: RNA pseudouridine synthase 7-like [Solanum tuberosum]
          Length = 385

 Score =  567 bits (1462), Expect = e-159
 Identities = 269/375 (71%), Positives = 317/375 (84%), Gaps = 2/375 (0%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            M+IVWQ P++PP R+DYIFR G R+VKPYYFEFI+HVKNRWAGKTIVDLF+DEFKGRP D
Sbjct: 12   MEIVWQTPANPPERHDYIFRNGIRYVKPYYFEFISHVKNRWAGKTIVDLFSDEFKGRPRD 71

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YY  AVK GRI+VD Q V++ Y V++SQKISHFLHRHEPPVM+WDV +L EE +V+T+ K
Sbjct: 72   YYESAVKSGRIQVDGQKVSVSYVVQSSQKISHFLHRHEPPVMSWDVEILCEEPDVLTVCK 131

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTVVGIL+AE+GL PLFP+HRLDRLVSGLLI+ARSAS+AD FR+QI
Sbjct: 132  PASVPVHPCGQYRKNTVVGILQAEYGLAPLFPVHRLDRLVSGLLILARSASRADLFRQQI 191

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGD--GCSDTPLKGKAACTK 785
            E+G VQK+YIA+V+GVFP+ + VV+ANVNYNAREG+STVEVGD  G S   LKGKAACTK
Sbjct: 192  ESGAVQKRYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDNQGSSTASLKGKAACTK 251

Query: 786  FKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRA 965
            F R+ TNG  SI+LCEPVTGRTHQIRVHLQ+  HPIAND+LYL+E V+ RS++G +ADRA
Sbjct: 252  FTRISTNGKQSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSEFVSSRSAQGLSADRA 311

Query: 966  AANMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTG 1145
            AA   +C         +    D  EDF IDPMCTNCPNLAPKGY+G+EE LWLHCVKY+G
Sbjct: 312  AAK--SCSPPDLISRTSDMANDSNEDFSIDPMCTNCPNLAPKGYEGNEEGLWLHCVKYSG 369

Query: 1146 PGWTYECPYPEWATL 1190
            P W YECP+P+WA+L
Sbjct: 370  PDWIYECPHPDWASL 384


>ref|XP_003526941.1| PREDICTED: RNA pseudouridine synthase 7 [Glycine max]
          Length = 381

 Score =  560 bits (1442), Expect = e-157
 Identities = 264/373 (70%), Positives = 316/373 (84%), Gaps = 1/373 (0%)
 Frame = +3

Query: 75   DIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYDY 254
            +IVWQ P++PPH NDY+FR G R+V+PYYFEFIAHVKNRWAGKTIVDLFA+EFKGRPY+Y
Sbjct: 13   NIVWQTPANPPHPNDYVFRNGIRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFKGRPYEY 72

Query: 255  YVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYKP 434
            YV AVKCGRI+VD + V + Y VK+SQKISHFLHRHEPPVMA +V VLQ++ +V+T+ KP
Sbjct: 73   YVSAVKCGRIQVDGEMVPVSYIVKSSQKISHFLHRHEPPVMACEVPVLQKDIDVLTVCKP 132

Query: 435  ASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQIE 614
            ASVPVHPCGQYRKNTVVGIL+AEHGLTPLFP+HRLDRLVSGLLI+AR+A+KAD FR+QIE
Sbjct: 133  ASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLILARNAAKADIFRQQIE 192

Query: 615  AGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFKR 794
            AGLV KQYIAKV G FPE E++VDAN++YNAREG+ST EV         KGKAA TKF R
Sbjct: 193  AGLVHKQYIAKVGGEFPEDEVIVDANIDYNAREGRSTAEVRGSA-----KGKAASTKFTR 247

Query: 795  LYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAAN 974
            + TNG+ SI+LCEP+TGRTHQIRVHLQ++ HPIAND+LY++E+   RS +G +ADR+A  
Sbjct: 248  ISTNGTQSIVLCEPITGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSVKGLSADRSARI 307

Query: 975  MG-NCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTGPG 1151
             G +  ++  +K +N CEE+   DF IDPMCTNCPNLAPKGYD  EE LWLHC++Y+GPG
Sbjct: 308  SGVSLTSNFNEKVLNECEENSNGDFGIDPMCTNCPNLAPKGYDSDEEGLWLHCIRYSGPG 367

Query: 1152 WTYECPYPEWATL 1190
            WTYECPYP+WA L
Sbjct: 368  WTYECPYPDWAKL 380


>ref|XP_004501725.1| PREDICTED: RNA pseudourine synthase 7-like [Cicer arietinum]
          Length = 380

 Score =  555 bits (1430), Expect = e-155
 Identities = 263/379 (69%), Positives = 311/379 (82%), Gaps = 1/379 (0%)
 Frame = +3

Query: 57   EDIPAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFK 236
            E+   MDIVWQ P++PP   DYIFR G R+V+PYYFEFIAHVKNRWAGKTIVDLFA+EFK
Sbjct: 7    EEKECMDIVWQTPANPPLPQDYIFRNGTRYVRPYYFEFIAHVKNRWAGKTIVDLFAEEFK 66

Query: 237  GRPYDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEV 416
            GRPY+YYV AVKCGRI+VD + V + Y VK+SQKISHFLHRHEPPVMA DV +L +E +V
Sbjct: 67   GRPYEYYVSAVKCGRIQVDGEMVPVSYLVKSSQKISHFLHRHEPPVMACDVPILHKEPDV 126

Query: 417  VTIYKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADS 596
            +TI KPASVPVHPCGQYRKNTVVGIL+AEHGL PLFP+HRLDRLVSGLLI+AR+ +KAD 
Sbjct: 127  LTICKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLILARNGTKADI 186

Query: 597  FRKQIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAA 776
            FR+QIEAGLV+KQYIAKVVG FP+ EL+VDAN++YN REG+ST EV D       KGK A
Sbjct: 187  FRQQIEAGLVKKQYIAKVVGEFPKDELIVDANIDYNPREGRSTAEVRDSA-----KGKVA 241

Query: 777  CTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTA 956
             TKF R+ +NG++SI+ CEPVTGRTHQIRVHLQ++ HPIAND+LY++E+   RS  G+TA
Sbjct: 242  STKFTRIISNGTHSIVSCEPVTGRTHQIRVHLQYSGHPIANDMLYISEQTVDRSINGSTA 301

Query: 957  DRAAANMGNCPASPADKNI-NGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCV 1133
            DR+A        S   + + N C+E+   DF  DPMCTNCPNLAPKGYDG+EE LWLHC 
Sbjct: 302  DRSARIADASLTSNFSEEVPNDCQENSNGDFGFDPMCTNCPNLAPKGYDGNEEGLWLHCF 361

Query: 1134 KYTGPGWTYECPYPEWATL 1190
            +Y+GPGWTYECPYP+WA L
Sbjct: 362  RYSGPGWTYECPYPDWAKL 380


>gb|EOY22574.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 426

 Score =  553 bits (1424), Expect = e-154
 Identities = 262/403 (65%), Positives = 312/403 (77%), Gaps = 30/403 (7%)
 Frame = +3

Query: 72   MDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYD 251
            MDIVWQ P+HP H++DYIF  G+R+V+PYYFEF++HV  RW GKTIVDLF  EF+GRP D
Sbjct: 24   MDIVWQTPAHPAHKDDYIFHNGKRYVRPYYFEFVSHVNKRWEGKTIVDLFTQEFRGRPND 83

Query: 252  YYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYK 431
            YYV AVKCGRI+VD +N+ + Y+VK  QKISHF+HRHEPPVMAWDV++LQ E +V+T+ K
Sbjct: 84   YYVSAVKCGRIQVDGENIPVSYKVKRCQKISHFVHRHEPPVMAWDVAILQNEPDVLTVCK 143

Query: 432  PASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQI 611
            PASVPVHPCGQYRKNTV+GIL+AEHGL+PL+PIHRLDRLVSGLLIVA++ +KAD FR+ I
Sbjct: 144  PASVPVHPCGQYRKNTVLGILQAEHGLSPLYPIHRLDRLVSGLLIVAKNPAKADIFRQHI 203

Query: 612  EAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVE-------------------- 731
            EAGLVQKQY+AKV+GVFPE E VVDANV+YNAREG+ST E                    
Sbjct: 204  EAGLVQKQYVAKVIGVFPECEQVVDANVDYNAREGRSTAEKRKTRRKMRSVVVIHKSLLC 263

Query: 732  ----------VGDGCSDTPLKGKAACTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHA 881
                      VG    DT LKGK ACTKF R+ TNG +SI+LCEP TGRTHQIRVHLQ  
Sbjct: 264  LLCRDFSFSKVGISNGDTTLKGKVACTKFTRISTNGIHSIVLCEPTTGRTHQIRVHLQCT 323

Query: 882  SHPIANDVLYLTEKVTYRSSEGTTADRAAANMGNCPASPADKNINGCEEDHVEDFVIDPM 1061
             HPIAND+LYL++ V  RS+ G TADRAAA   +CP +  + N N   +   EDF IDPM
Sbjct: 324  GHPIANDMLYLSDNVVDRSTLGMTADRAAALSCSCPVTSCE-NHNEEYKVSSEDFSIDPM 382

Query: 1062 CTNCPNLAPKGYDGHEEALWLHCVKYTGPGWTYECPYPEWATL 1190
            C++CPNLAP GY+GHEE LWLHCV+Y+GPGW YECPYP+WA+L
Sbjct: 383  CSHCPNLAPNGYNGHEEGLWLHCVRYSGPGWVYECPYPDWASL 425


>ref|XP_003602781.1| RNA pseudourine synthase [Medicago truncatula]
            gi|355491829|gb|AES73032.1| RNA pseudourine synthase
            [Medicago truncatula]
          Length = 380

 Score =  552 bits (1423), Expect = e-154
 Identities = 263/379 (69%), Positives = 314/379 (82%), Gaps = 1/379 (0%)
 Frame = +3

Query: 57   EDIPAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFK 236
            E+   MDIVWQ P++PP   DYI R G R V+PYYFEFIAHVKNRWAGKTIVDLFA+EFK
Sbjct: 7    EEKECMDIVWQTPANPPLPQDYIVRNGIRFVRPYYFEFIAHVKNRWAGKTIVDLFAEEFK 66

Query: 237  GRPYDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEV 416
            GRPY+YYV AVKCGRI+VD + V + Y VK+SQKISHFLHRHEPPVMA DV +L +E +V
Sbjct: 67   GRPYEYYVSAVKCGRIQVDGEMVPVSYVVKSSQKISHFLHRHEPPVMACDVPILHKEPDV 126

Query: 417  VTIYKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADS 596
            +T+ KPASVPVHPCGQYRKNTVVGIL+AEHGL PLFP+HRLDRLVSGLLI+AR+A+KADS
Sbjct: 127  LTVCKPASVPVHPCGQYRKNTVVGILQAEHGLAPLFPVHRLDRLVSGLLIIARNATKADS 186

Query: 597  FRKQIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAA 776
            FR++IEAGLV+KQYIAKVVG FPE E++VDAN++YNAREG+ST EV D       KGK A
Sbjct: 187  FRQEIEAGLVKKQYIAKVVGEFPEDEIIVDANIDYNAREGRSTAEVRDS-----TKGKVA 241

Query: 777  CTKFKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTA 956
             TKF R+ +NG++SI+LCEPVTGRTHQIRVHLQ + HPIAND+LY++E+   RS  G+TA
Sbjct: 242  STKFTRISSNGTHSIVLCEPVTGRTHQIRVHLQSSGHPIANDMLYISEQTVDRSINGSTA 301

Query: 957  DRAAA-NMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCV 1133
            DR+A  +  +  ++  +K     +E+  EDF IDPMCTNCPNLAPKGYD  EE LWLHC+
Sbjct: 302  DRSACISDASLTSNFGEKVPKDYQENSNEDFRIDPMCTNCPNLAPKGYDTDEEGLWLHCM 361

Query: 1134 KYTGPGWTYECPYPEWATL 1190
            +Y+GPGWTYECPYP+WA L
Sbjct: 362  RYSGPGWTYECPYPDWAKL 380


>ref|XP_003575026.1| PREDICTED: RNA pseudourine synthase 7-like [Brachypodium distachyon]
          Length = 384

 Score =  547 bits (1410), Expect = e-153
 Identities = 257/375 (68%), Positives = 307/375 (81%)
 Frame = +3

Query: 66   PAMDIVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRP 245
            P   IVWQ P++PP   DYIFR GRR+V+PYYFEFI+HVKNRWAGKTIVDLF +EFKGRP
Sbjct: 6    PGAGIVWQTPANPPEAQDYIFRNGRRYVRPYYFEFISHVKNRWAGKTIVDLFTEEFKGRP 65

Query: 246  YDYYVRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTI 425
            Y+YYV AVKCGR++VD+Q V   Y VK+SQKISHFLHRHEPPV+  ++ +LQ E +VVT+
Sbjct: 66   YEYYVHAVKCGRLQVDEQTVPADYIVKSSQKISHFLHRHEPPVLGGNILILQNEVDVVTV 125

Query: 426  YKPASVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRK 605
             KPASVPVHPCGQYRKNTVVGIL+AEHGLTPLFP+HRLDRLVSGLLI A+SA +A+ FR+
Sbjct: 126  CKPASVPVHPCGQYRKNTVVGILQAEHGLTPLFPVHRLDRLVSGLLIFAKSADRAECFRQ 185

Query: 606  QIEAGLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTK 785
            QIEA L+QK+Y+AKVVGVFP+GE  VDANVN+NAREG+STVEV DG       GK ACTK
Sbjct: 186  QIEANLLQKEYVAKVVGVFPDGEQTVDANVNFNAREGRSTVEVCDGPGKALPSGKQACTK 245

Query: 786  FKRLYTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRA 965
            F+R++T+G++SI+LC+PVTGRTHQIRVHL+H  +PIAND LYL+     RSS+GT  +RA
Sbjct: 246  FQRIFTDGNHSIVLCKPVTGRTHQIRVHLKHIGYPIANDELYLSGNFCPRSSKGTGINRA 305

Query: 966  AANMGNCPASPADKNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKYTG 1145
             +    C  S  D + +       E+F IDPMCTNCPNLAP GYDG EEALWLHCV+YTG
Sbjct: 306  TSLA--CSLSSPDPDSSA----EAEEFGIDPMCTNCPNLAPVGYDGDEEALWLHCVRYTG 359

Query: 1146 PGWTYECPYPEWATL 1190
            P W+YECPYP+WA+L
Sbjct: 360  PDWSYECPYPDWASL 374


>sp|Q0E0Y3.2|PUS7_ORYSJ RecName: Full=RNA pseudouridine synthase 7; AltName: Full=RNA
            pseudouridylate synthase 7; AltName: Full=RNA-uridine
            isomerase 7 gi|222622934|gb|EEE57066.1| hypothetical
            protein OsJ_06883 [Oryza sativa Japonica Group]
          Length = 393

 Score =  545 bits (1403), Expect = e-152
 Identities = 259/377 (68%), Positives = 310/377 (82%), Gaps = 6/377 (1%)
 Frame = +3

Query: 78   IVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYDYY 257
            IVWQ P++PP R DYIFR+GRR+V+PYYFEFI+HVKNRWAGKTIVDLF DEFKGRP +YY
Sbjct: 8    IVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPREYY 67

Query: 258  VRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYKPA 437
            V AVKCGR++VDDQ V   Y V++SQKISHFLHRHEPPV+  D+++LQ E +VVT+ KPA
Sbjct: 68   VHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVCKPA 127

Query: 438  SVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQIEA 617
            SVPVHPCGQYRKNTVVGIL+AEHGL PLFP+HRLDRLVSGLLI A++A KA+SFR+QIEA
Sbjct: 128  SVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQIEA 187

Query: 618  GLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFKRL 797
             L+QK+Y+AKVVGVFP+GE  V+ANV++NAREG+ST EV DG    P+ GK ACTKF+R+
Sbjct: 188  SLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTAEVCDGDGKAPI-GKQACTKFQRI 246

Query: 798  YTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAANM 977
             T+G +SI+LC+PVTGRTHQIRVHL+H  +PIAND +YL+E  + RSS+GT  +RA    
Sbjct: 247  CTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRATTLA 306

Query: 978  GNCPASP----ADKNINGCEEDHV--EDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKY 1139
             + P+S     AD   N   ED    E+F IDPMCTNCPNLAP GYD  EEALWLHCV+Y
Sbjct: 307  CSLPSSDPDSCADLGNNDTNEDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRY 366

Query: 1140 TGPGWTYECPYPEWATL 1190
            TGP W+YECPYP+WA L
Sbjct: 367  TGPDWSYECPYPDWAFL 383


>gb|EEC73258.1| hypothetical protein OsI_07380 [Oryza sativa Indica Group]
          Length = 393

 Score =  544 bits (1401), Expect = e-152
 Identities = 256/377 (67%), Positives = 309/377 (81%), Gaps = 6/377 (1%)
 Frame = +3

Query: 78   IVWQNPSHPPHRNDYIFREGRRHVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYDYY 257
            IVWQ P++PP R DYIFR+GRR+V+PYYFEFI+HVKNRWAGKTIVDLF DEFKGRP +YY
Sbjct: 8    IVWQTPANPPERQDYIFRDGRRYVRPYYFEFISHVKNRWAGKTIVDLFTDEFKGRPREYY 67

Query: 258  VRAVKCGRIKVDDQNVTLYYRVKASQKISHFLHRHEPPVMAWDVSVLQEEEEVVTIYKPA 437
            V AVKCGR++VDDQ V   Y V++SQKISHFLHRHEPPV+  D+++LQ E +VVT+ KPA
Sbjct: 68   VHAVKCGRLQVDDQMVHADYVVQSSQKISHFLHRHEPPVLGGDITILQNEADVVTVCKPA 127

Query: 438  SVPVHPCGQYRKNTVVGILEAEHGLTPLFPIHRLDRLVSGLLIVARSASKADSFRKQIEA 617
            SVPVHPCGQYRKNTVVGIL+AEHGL PLFP+HRLDRLVSGLLI A++A KA+SFR+QIEA
Sbjct: 128  SVPVHPCGQYRKNTVVGILQAEHGLVPLFPVHRLDRLVSGLLIFAKNADKAESFRQQIEA 187

Query: 618  GLVQKQYIAKVVGVFPEGELVVDANVNYNAREGKSTVEVGDGCSDTPLKGKAACTKFKRL 797
             L+QK+Y+AKVVGVFP+GE  V+ANV++NAREG+ST EV DG    P+ GK ACTKF+R+
Sbjct: 188  SLLQKEYVAKVVGVFPDGEQTVNANVHFNAREGRSTAEVCDGDGKAPI-GKQACTKFQRI 246

Query: 798  YTNGSYSIILCEPVTGRTHQIRVHLQHASHPIANDVLYLTEKVTYRSSEGTTADRAAANM 977
             T+G +SI+LC+PVTGRTHQIRVHL+H  +PIAND +YL+E  + RSS+GT  +RA    
Sbjct: 247  CTDGIHSIVLCKPVTGRTHQIRVHLKHIGYPIANDEVYLSENFSPRSSKGTRINRATTLA 306

Query: 978  GNCPASPAD------KNINGCEEDHVEDFVIDPMCTNCPNLAPKGYDGHEEALWLHCVKY 1139
             + P+S  D       N    + +  E+F IDPMCTNCPNLAP GYD  EEALWLHCV+Y
Sbjct: 307  CSLPSSDPDSCADLGNNDTNKDTEADEEFSIDPMCTNCPNLAPVGYDADEEALWLHCVRY 366

Query: 1140 TGPGWTYECPYPEWATL 1190
            TGP W+YECPYP+WA L
Sbjct: 367  TGPDWSYECPYPDWAFL 383