BLASTX nr result
ID: Rheum21_contig00000460
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00000460
(400 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003530924.2| PREDICTED: adagio protein 3-like [Glycine max] 77 2e-12
ref|XP_002314780.2| FLAVIN-BINDING KELCH DOMAIN F BOX family pro... 77 3e-12
gb|AAQ73528.1| FKF1 [Mesembryanthemum crystallinum] 76 4e-12
gb|AFA35966.1| flavin-binding, kelch repeat, f-box 1/adagio3 [Ni... 75 9e-12
ref|XP_002533198.1| Adagio protein, putative [Ricinus communis] ... 75 1e-11
gb|ESW32429.1| hypothetical protein PHAVU_002G321800g [Phaseolus... 74 2e-11
gb|ESW10805.1| hypothetical protein PHAVU_009G239400g [Phaseolus... 74 3e-11
gb|EOY01113.1| Flavin-binding, kelch repeat, f box 1 isoform 1 [... 74 3e-11
ref|XP_004142261.1| PREDICTED: adagio protein 3-like [Cucumis sa... 74 3e-11
ref|XP_003594943.1| PAS protein ZEITLUPE [Medicago truncatula] g... 74 3e-11
ref|XP_002888641.1| flavin-binding kelch domain F box protein [A... 73 3e-11
ref|XP_004487946.1| PREDICTED: adagio protein 1-like [Cicer arie... 73 4e-11
ref|NP_001235886.1| circadian clock-associated FKF1 [Glycine max... 73 4e-11
gb|EXB32326.1| Adagio protein 3 [Morus notabilis] 72 6e-11
ref|XP_003533717.1| PREDICTED: adagio protein 1-like [Glycine max] 72 6e-11
ref|XP_003546409.1| PREDICTED: adagio protein 1-like isoform X1 ... 72 6e-11
ref|XP_006301597.1| hypothetical protein CARUB_v10022036mg [Caps... 72 8e-11
ref|XP_004228739.1| PREDICTED: adagio protein 3-like [Solanum ly... 72 8e-11
gb|AAF32298.2|AF216523_1 FKF1 [Arabidopsis thaliana] gi|13487072... 72 8e-11
ref|NP_564919.1| flavin-binding, kelch repeat, f box 1 [Arabidop... 72 8e-11
>ref|XP_003530924.2| PREDICTED: adagio protein 3-like [Glycine max]
Length = 647
Score = 77.0 bits (188), Expect = 2e-12
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Frame = +3
Query: 132 AGKRQKCS----QEREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVVCD 299
+GKR KC+ +E+E Y QV ++ G +F YP + P+S VV D
Sbjct: 28 SGKRLKCTRNEEEEKEQYEQVEADEEEEEEEDSELPLKLG--LFFYPTI---PTSFVVSD 82
Query: 300 ALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
ALEPD+PIIYVN VFE+ TGY A E +GRNCRF
Sbjct: 83 ALEPDFPIIYVNKVFEIATGYRADEALGRNCRF 115
>ref|XP_002314780.2| FLAVIN-BINDING KELCH DOMAIN F BOX family protein [Populus
trichocarpa] gi|550329584|gb|EEF00951.2| FLAVIN-BINDING
KELCH DOMAIN F BOX family protein [Populus trichocarpa]
Length = 627
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/95 (46%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +3
Query: 123 YSPAGKRQKCSQ---EREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVV 293
+ +GKR KC++ E E ++V + +T G +F +P TP S VV
Sbjct: 16 FQSSGKRLKCTKSLKEDEMESEVSL------------MEDTRGGLFFHP---TTPVSFVV 60
Query: 294 CDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
DALE D+PIIYVN VFE+ TGYHA EV+GRNCRF
Sbjct: 61 SDALELDFPIIYVNKVFEIFTGYHAHEVLGRNCRF 95
>gb|AAQ73528.1| FKF1 [Mesembryanthemum crystallinum]
Length = 634
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/50 (70%), Positives = 37/50 (74%)
Frame = +3
Query: 249 FCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
F YP PSSIVVCDALE DYPIIYVN FE+ TGY A E +GRNCRF
Sbjct: 58 FYYPQPVLAPSSIVVCDALEADYPIIYVNTSFEIFTGYRANEALGRNCRF 107
>gb|AFA35966.1| flavin-binding, kelch repeat, f-box 1/adagio3 [Nicotiana attenuata]
Length = 629
Score = 75.1 bits (183), Expect = 9e-12
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = +3
Query: 249 FCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
F YP + TPSSIVV DALEPD PIIYVN VFE+ TGY A EV+GRNCRF
Sbjct: 50 FFYP--STTPSSIVVSDALEPDLPIIYVNTVFEISTGYRADEVLGRNCRF 97
>ref|XP_002533198.1| Adagio protein, putative [Ricinus communis]
gi|223526996|gb|EEF29190.1| Adagio protein, putative
[Ricinus communis]
Length = 630
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/49 (71%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = +3
Query: 258 PFMA--ETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
PF+ ETP+SIVV DALEPD+PIIYVN VFE+ TGY A EV+G+NCRF
Sbjct: 53 PFLMYPETPTSIVVSDALEPDFPIIYVNKVFEIFTGYRADEVLGQNCRF 101
>gb|ESW32429.1| hypothetical protein PHAVU_002G321800g [Phaseolus vulgaris]
Length = 623
Score = 74.3 bits (181), Expect = 2e-11
Identities = 41/88 (46%), Positives = 50/88 (56%)
Frame = +3
Query: 135 GKRQKCSQEREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVVCDALEPD 314
GKR KC++ E + V P IF YP TP+S VV DALEPD
Sbjct: 18 GKRLKCTRNDEDDDGVEAVEEEDSELLLKP------GIFFYP---TTPTSFVVSDALEPD 68
Query: 315 YPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P+IYVN +FE+ TGY A E +GRNCRF
Sbjct: 69 FPVIYVNKIFEISTGYRADEALGRNCRF 96
>gb|ESW10805.1| hypothetical protein PHAVU_009G239400g [Phaseolus vulgaris]
Length = 612
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3
Query: 255 YPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P + P VV DALEPD+PIIYVNAVFE++TGY A EV+GRNCRF
Sbjct: 33 FPVLQTAPCGFVVTDALEPDHPIIYVNAVFEMVTGYRAEEVLGRNCRF 80
>gb|EOY01113.1| Flavin-binding, kelch repeat, f box 1 isoform 1 [Theobroma cacao]
gi|508709217|gb|EOY01114.1| Flavin-binding, kelch
repeat, f box 1 isoform 1 [Theobroma cacao]
Length = 633
Score = 73.6 bits (179), Expect = 3e-11
Identities = 33/46 (71%), Positives = 37/46 (80%)
Frame = +3
Query: 261 FMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
F TP+S VV DALEPD+PIIYVN VFE+ TGY A EV+GRNCRF
Sbjct: 56 FFPTTPTSFVVSDALEPDFPIIYVNKVFEVFTGYRADEVLGRNCRF 101
>ref|XP_004142261.1| PREDICTED: adagio protein 3-like [Cucumis sativus]
Length = 629
Score = 73.6 bits (179), Expect = 3e-11
Identities = 40/89 (44%), Positives = 51/89 (57%)
Frame = +3
Query: 132 AGKRQKCSQEREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVVCDALEP 311
+GKR KCS+ + + P+ +F YP P+S VV DALEP
Sbjct: 15 SGKRLKCSKHDDEQYHLGNEEEEEEQVTELPLKP---GLFFYPM---APTSFVVSDALEP 68
Query: 312 DYPIIYVNAVFELLTGYHATEVIGRNCRF 398
D+PIIYVN VFE+ TGY A EV+G+NCRF
Sbjct: 69 DFPIIYVNKVFEIFTGYRADEVLGQNCRF 97
>ref|XP_003594943.1| PAS protein ZEITLUPE [Medicago truncatula]
gi|355483991|gb|AES65194.1| PAS protein ZEITLUPE
[Medicago truncatula]
Length = 612
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = +3
Query: 255 YPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P + P VV DAL+PD+PIIYVNAVFE+LTGY A EV+GRNCRF
Sbjct: 32 FPVLQTAPCGFVVTDALDPDHPIIYVNAVFEMLTGYRAEEVLGRNCRF 79
>ref|XP_002888641.1| flavin-binding kelch domain F box protein [Arabidopsis lyrata
subsp. lyrata] gi|297334482|gb|EFH64900.1|
flavin-binding kelch domain F box protein [Arabidopsis
lyrata subsp. lyrata]
Length = 623
Score = 73.2 bits (178), Expect = 3e-11
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = +3
Query: 273 TPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
TP S +V DALEPD+P+IYVN VFE+ TGYHA EV+GRNCRF
Sbjct: 56 TPPSFIVSDALEPDFPLIYVNKVFEVFTGYHADEVLGRNCRF 97
>ref|XP_004487946.1| PREDICTED: adagio protein 1-like [Cicer arietinum]
Length = 612
Score = 72.8 bits (177), Expect = 4e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 255 YPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P + P VV DA++PD+PIIYVNAVFE+LTGY A EV+GRNCRF
Sbjct: 32 FPVLQTAPCGFVVTDAIDPDHPIIYVNAVFEMLTGYRAEEVLGRNCRF 79
>ref|NP_001235886.1| circadian clock-associated FKF1 [Glycine max]
gi|87138101|gb|ABD28287.1| circadian clock-associated
FKF1 [Glycine max]
Length = 625
Score = 72.8 bits (177), Expect = 4e-11
Identities = 42/90 (46%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +3
Query: 135 GKRQKC--SQEREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVVCDALE 308
GKR KC ++E E Y + + F YP TP+S VV DALE
Sbjct: 19 GKRLKCMRNEEEEVYEEEESE------------LPLKPGFFFYP---TTPTSFVVSDALE 63
Query: 309 PDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
PD+PIIYVN VFE+ TGY A E +GRNCRF
Sbjct: 64 PDFPIIYVNKVFEISTGYRADEALGRNCRF 93
>gb|EXB32326.1| Adagio protein 3 [Morus notabilis]
Length = 631
Score = 72.4 bits (176), Expect = 6e-11
Identities = 41/89 (46%), Positives = 52/89 (58%)
Frame = +3
Query: 132 AGKRQKCSQEREFYNQVXXXXXXXXXXXXGPIMETGGSIFCYPFMAETPSSIVVCDALEP 311
+GKR K ++E E N + G +F YP TP+S VV DAL+P
Sbjct: 18 SGKRMKLAKEEEPQN---GDVEEEELLSDSELPLKSGFLF-YPM---TPTSFVVSDALDP 70
Query: 312 DYPIIYVNAVFELLTGYHATEVIGRNCRF 398
D+P+IYVN VFE+ TGY A EV+GRNCRF
Sbjct: 71 DFPVIYVNKVFEIFTGYRADEVLGRNCRF 99
>ref|XP_003533717.1| PREDICTED: adagio protein 1-like [Glycine max]
Length = 614
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 255 YPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P + P VV DA+EPD+PIIYVNAVFE++TGY A EV+GRNCRF
Sbjct: 32 FPVLQTAPCGFVVTDAVEPDHPIIYVNAVFEMVTGYRAEEVLGRNCRF 79
>ref|XP_003546409.1| PREDICTED: adagio protein 1-like isoform X1 [Glycine max]
Length = 611
Score = 72.4 bits (176), Expect = 6e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 255 YPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+P + P VV DAL+PD+PIIYVNAVFE++TGY A EV+GRNCRF
Sbjct: 32 FPVLQTAPCGFVVTDALDPDHPIIYVNAVFEMVTGYRAEEVLGRNCRF 79
>ref|XP_006301597.1| hypothetical protein CARUB_v10022036mg [Capsella rubella]
gi|482570307|gb|EOA34495.1| hypothetical protein
CARUB_v10022036mg [Capsella rubella]
Length = 624
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3
Query: 246 IFCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+F YP TP S +V DALEPD+P+IYVN VFE+ TGY A EV+GRNCRF
Sbjct: 51 MFYYPM---TPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRF 98
>ref|XP_004228739.1| PREDICTED: adagio protein 3-like [Solanum lycopersicum]
Length = 641
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = +3
Query: 249 FCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
F YP TPSSIVV DAL+PD P+IYVN+VFE TGY A EV+GRNCRF
Sbjct: 62 FFYPLT--TPSSIVVSDALDPDLPVIYVNSVFESSTGYRADEVLGRNCRF 109
>gb|AAF32298.2|AF216523_1 FKF1 [Arabidopsis thaliana] gi|13487072|gb|AAK27435.1|AF252296_1
Adagio 3 [Arabidopsis thaliana]
Length = 619
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3
Query: 246 IFCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+F YP TP S +V DALEPD+P+IYVN VFE+ TGY A EV+GRNCRF
Sbjct: 46 MFYYPM---TPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRF 93
>ref|NP_564919.1| flavin-binding, kelch repeat, f box 1 [Arabidopsis thaliana]
gi|75169796|sp|Q9C9W9.1|ADO3_ARATH RecName: Full=Adagio
protein 3; AltName: Full=F-box only protein 2a;
Short=FBX2a; AltName: Full=Flavin-binding kelch repeat
F-box protein 1 gi|12324066|gb|AAG51994.1|AC012563_4
unknown protein; 35653-33693 [Arabidopsis thaliana]
gi|18086374|gb|AAL57647.1| At1g68050/T23K23_10
[Arabidopsis thaliana] gi|21360443|gb|AAM47337.1|
At1g68050/T23K23_10 [Arabidopsis thaliana]
gi|332196620|gb|AEE34741.1| flavin-binding, kelch
repeat, f box 1 [Arabidopsis thaliana]
Length = 619
Score = 72.0 bits (175), Expect = 8e-11
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3
Query: 246 IFCYPFMAETPSSIVVCDALEPDYPIIYVNAVFELLTGYHATEVIGRNCRF 398
+F YP TP S +V DALEPD+P+IYVN VFE+ TGY A EV+GRNCRF
Sbjct: 46 MFYYPM---TPPSFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRF 93