BLASTX nr result
ID: Rheum21_contig00000274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00000274
(2253 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY24655.1| P-loop containing nucleoside triphosphate hydrola... 681 0.0
ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 679 0.0
ref|XP_006477431.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 669 0.0
ref|XP_006440569.1| hypothetical protein CICLE_v10019528mg [Citr... 665 0.0
ref|XP_004290722.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 660 0.0
ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Popul... 659 0.0
ref|XP_004147988.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 657 0.0
ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putativ... 654 0.0
ref|NP_001047522.1| Os02g0636300 [Oryza sativa Japonica Group] g... 636 e-179
ref|XP_002454221.1| hypothetical protein SORBIDRAFT_04g026990 [S... 635 e-179
gb|EXB56020.1| DEAD-box ATP-dependent RNA helicase 47 [Morus not... 635 e-179
gb|ACG27628.1| EMB1586 [Zea mays] gi|223946723|gb|ACN27445.1| un... 634 e-179
ref|XP_006647573.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 634 e-179
ref|XP_004953210.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 632 e-178
ref|XP_002889966.1| EMB1586 [Arabidopsis lyrata subsp. lyrata] g... 631 e-178
ref|NP_001049403.1| Os03g0219700 [Oryza sativa Japonica Group] g... 629 e-177
ref|XP_004245636.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 627 e-177
ref|XP_006358880.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 627 e-177
gb|ESW21142.1| hypothetical protein PHAVU_005G045400g [Phaseolus... 627 e-177
ref|NP_172737.2| DEAD-box ATP-dependent RNA helicase 47 [Arabido... 626 e-176
>gb|EOY24655.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein [Theobroma cacao]
Length = 560
Score = 681 bits (1756), Expect = 0.0
Identities = 374/624 (59%), Positives = 445/624 (71%), Gaps = 12/624 (1%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPF----SISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSER 478
MPA+ S RLL G+SLPF S+SR + L R
Sbjct: 1 MPALASTRLLLFFGESLPFHRFPSVSRKVWC---------------------QLSVRFVS 39
Query: 479 QVTRHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVL 658
QV ++ P T LGFKSE T K+
Sbjct: 40 QVNHNNGP-----------LTLASLGFKSEFGETNKN----------------------- 65
Query: 659 RPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQ---VEPAAVKKPLEVDTTLFSA 829
+ N++E V EA K K +V N V+ VKK LE+++ F+A
Sbjct: 66 KGNKIERLSVSN------------EAPKSKVRVIGSNSIKGVKVVGVKKSLEIESAPFAA 113
Query: 830 KSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPIL 1009
+SF G+T PTDVQS ++PT++K HDVVIQSYTGSGKTLAYLLPIL
Sbjct: 114 QSFPELGLPPLLLESLETAGYTVPTDVQSVAVPTVLKGHDVVIQSYTGSGKTLAYLLPIL 173
Query: 1010 SEVGPLAKKTPNRE-DSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGG 1186
SEVGPL KK+PN +S K+++IEAVIVAPSRELGMQIVRE EKLLGP +KR VQQLVGG
Sbjct: 174 SEVGPLKKKSPNGNGESGKKREIEAVIVAPSRELGMQIVREFEKLLGPADKRVVQQLVGG 233
Query: 1187 ANRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMH 1366
ANRSRQEEALKKNKP IVVGTPGRIAEISA GKLHTHGCRFLVLDEVDELL+FNFREDMH
Sbjct: 234 ANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDELLSFNFREDMH 293
Query: 1367 RILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKIS 1546
RILEHVGR++GA+PR + LAK ERQTIMVSATVP+SV+RAARSWGRDP+LV+AKK+
Sbjct: 294 RILEHVGRRSGADPRGS---LAKWAERQTIMVSATVPYSVIRAARSWGRDPLLVQAKKVM 350
Query: 1547 PLESVSPSGPVNI----SALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIY 1714
PLESVSPSGPVN+ S+ +S+ QTQAAS+SLPP+LKH++CV+KLQHKVDTLRRC++
Sbjct: 351 PLESVSPSGPVNLLRPTSSSDSSSNMQTQAASQSLPPALKHYHCVTKLQHKVDTLRRCVH 410
Query: 1715 ALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVT 1894
ALD++ VI FMN+ +QLKD V+KL+ARG+KA ELHGDL KL R+T LKKFK GE++VLVT
Sbjct: 411 ALDSKSVIAFMNHAKQLKDAVFKLEARGMKAAELHGDLGKLVRSTTLKKFKHGEVRVLVT 470
Query: 1895 NELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLE 2074
NEL+ARGLDV ECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTV+ +CE+ EVFVVKKL+
Sbjct: 471 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEEPEVFVVKKLQ 530
Query: 2075 RQLGVSVQACDFVEGQLVIKQEER 2146
+QLGV + AC+F EG+L + +EE+
Sbjct: 531 KQLGVPIPACEFTEGKLHVIEEEK 554
>ref|XP_002276531.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial
[Vitis vinifera] gi|147852111|emb|CAN82264.1|
hypothetical protein VITISV_009282 [Vitis vinifera]
Length = 557
Score = 679 bits (1752), Expect = 0.0
Identities = 369/616 (59%), Positives = 442/616 (71%), Gaps = 5/616 (0%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFSISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVTR 490
M A+ S RLL LVGD LP G L S S R ++R
Sbjct: 1 MQALASTRLLLLVGDCLPV-----------------------GKLLHVSRFHGSVRFLSR 37
Query: 491 HDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPNR 670
D+ T LGFKSE + T K ++ K QL +V E
Sbjct: 38 VDREHG--------PLTLASLGFKSEFETT-KGNKTKPLHQLNAVPE------------- 75
Query: 671 VEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXX 850
+K K K R N+++ KK +E++ F+AKSFS
Sbjct: 76 ---------------------VSKNKVKAVRSNEMKAVGTKKSIEIEAAPFAAKSFSELG 114
Query: 851 XXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLA 1030
+ GF+ PTDVQS +IPTI+KNHDVVIQSYTGSGKTLAYLLPILSEVGPL
Sbjct: 115 LPPLLIDRLEREGFSVPTDVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLK 174
Query: 1031 KKTPNREDSSKRK-DIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQE 1207
K PN +++S+ K +IEAVI+APSRELGMQIVREVEKLLGP +K+ VQQLVGGANR+RQE
Sbjct: 175 NKPPNADNTSRNKMEIEAVILAPSRELGMQIVREVEKLLGPADKKLVQQLVGGANRTRQE 234
Query: 1208 EALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHVG 1387
EALKKNKP IVVGTPGRIAE+SA+GKL THGCR+LVLDEVDELL+FNFREDMHRILEHVG
Sbjct: 235 EALKKNKPSIVVGTPGRIAEMSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVG 294
Query: 1388 RKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVSP 1567
R++GA+P T PL +R ERQTIMVSATVPFSV+RAARSWGRDP+LV+AK + PLES+ P
Sbjct: 295 RRSGADPHGTKSPLERRTERQTIMVSATVPFSVIRAARSWGRDPLLVQAKSVIPLESL-P 353
Query: 1568 SGPVNI----SALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFV 1735
+GPVN+ S +S+ + QTQAA+E LPP LKH++CV+KLQHK+DTLRRC++ALDA+ V
Sbjct: 354 TGPVNLLGPTSTSSSSSSLQTQAAAEGLPPVLKHYFCVTKLQHKIDTLRRCVHALDAKCV 413
Query: 1736 IVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARG 1915
I FMN+ ++LKD V+KL+ARG+KA ELHGDL KLAR+T LKKFK GE++VLVTNEL+ARG
Sbjct: 414 IAFMNHTKRLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARG 473
Query: 1916 LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSV 2095
LDV ECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTV+N+CE+ EVFVVKKL+RQLGV +
Sbjct: 474 LDVSECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVNICEEPEVFVVKKLQRQLGVPI 533
Query: 2096 QACDFVEGQLVIKQEE 2143
QAC+F EG+LV +E
Sbjct: 534 QACEFTEGKLVATTDE 549
>ref|XP_006477431.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47A-like [Citrus
sinensis]
Length = 560
Score = 669 bits (1727), Expect = 0.0
Identities = 365/622 (58%), Positives = 438/622 (70%), Gaps = 11/622 (1%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFS----ISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSER 478
MPA+VS RLL LVG+SLP +SR + G R
Sbjct: 1 MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHN---------------------GVRFLS 39
Query: 479 QVTRHDKPKELPQVDTAVEATKTGLGFKSELKATAKH--DRPKEYRQLGSVVEPIRRKAK 652
QV RH P T LG+KSE + T K+ ++PK++
Sbjct: 40 QVGRHHGP-----------LTLASLGYKSEFEPTNKNKSNKPKKH--------------- 73
Query: 653 VLRPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAK 832
S +E K K K R + ++ A VKK LE+++ F+A
Sbjct: 74 -----------------------SPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAAN 110
Query: 833 SFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILS 1012
SF + GF PT+VQS +IP+I+KNHDVVIQSYTGSGKTLAYLLPILS
Sbjct: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
Query: 1013 EVGPLAKKTPNRE-DSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGA 1189
+VGPL K+ N +S K+ DIEAVIVAPSRELGMQIVRE+EKLLGP++K+AVQQLVGGA
Sbjct: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIEKLLGPSDKKAVQQLVGGA 230
Query: 1190 NRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHR 1369
NRSRQEEAL+KNKP IVVGTPGRIAEISA GKLHTHGCRFLVLDE+DELL+FNFRE MHR
Sbjct: 231 NRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHR 290
Query: 1370 ILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISP 1549
I+EHVGR++GA PR LA R ERQTIMVSATVPFSV+RAARSWG DP+LV+AK + P
Sbjct: 291 IVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIP 350
Query: 1550 LESVSPSGPVNISALNSAPTG----QTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYA 1717
LES+ +GP N+S S + Q + A +SLPP+LKH+YCV+KLQHKVDTLRRC++A
Sbjct: 351 LESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHA 410
Query: 1718 LDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTN 1897
LDA+ VI FMNN RQLKD V+KL+ARG+KA ELHGDL KLAR+T LKKFK GE++VLVTN
Sbjct: 411 LDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTN 470
Query: 1898 ELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLER 2077
EL+ARGLDV ECDLVVNLDLPTDSIHYAHRAGRTGRLGR+GTV+++CE+ EVFVVKK+++
Sbjct: 471 ELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQK 530
Query: 2078 QLGVSVQACDFVEGQLVIKQEE 2143
QL V +QAC+F EG+LVI +EE
Sbjct: 531 QLAVPIQACEFTEGRLVIGKEE 552
>ref|XP_006440569.1| hypothetical protein CICLE_v10019528mg [Citrus clementina]
gi|557542831|gb|ESR53809.1| hypothetical protein
CICLE_v10019528mg [Citrus clementina]
Length = 561
Score = 665 bits (1716), Expect = 0.0
Identities = 362/622 (58%), Positives = 438/622 (70%), Gaps = 11/622 (1%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFS----ISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSER 478
MPA+VS RLL LVG+SLP +SR + G R
Sbjct: 1 MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHN---------------------GVRFLS 39
Query: 479 QVTRHDKPKELPQVDTAVEATKTGLGFKSELKATAKH--DRPKEYRQLGSVVEPIRRKAK 652
QV +H P T LG+KSE ++T K+ ++PK++
Sbjct: 40 QVGQHHGP-----------LTLASLGYKSEFESTNKNKSNKPKKHSP------------- 75
Query: 653 VLRPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAK 832
+E K K K R + ++ A VKK LE+++ F+A
Sbjct: 76 ------------------------PIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAAN 111
Query: 833 SFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILS 1012
SF + GF PT+VQS +IP+I+KNHDVVIQSYTGSGKTLAYLLPILS
Sbjct: 112 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 171
Query: 1013 EVGPLAKKTPNRE-DSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGA 1189
+VGPL K+ N +S K+ DIEAVIVAPSRELGMQIVRE++KLLGP++K+AVQQLVGGA
Sbjct: 172 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 231
Query: 1190 NRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHR 1369
NRSRQEEAL+KNKP IVVGTPGRIAEISA GKLHTHGCRFLVLDE+DELL+FNFRE MHR
Sbjct: 232 NRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHR 291
Query: 1370 ILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISP 1549
I+EHVGR++GA PR LA R ERQTIMVSATVPFSV+RAARSWG DP+LV+AK + P
Sbjct: 292 IVEHVGRRSGANPREPKSALATRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIP 351
Query: 1550 LESVSPSGPVNISALNSAPTG----QTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYA 1717
LES+ +GP N+S S + Q + A +SLPP+LKH+YCV+KLQHKVDTLRRC++A
Sbjct: 352 LESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHA 411
Query: 1718 LDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTN 1897
LDA+ VI FMNN RQLKD V+KL+ARG+KA ELHGDL KLAR+T LKKFK GE++VLVTN
Sbjct: 412 LDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTN 471
Query: 1898 ELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLER 2077
EL+ARGLDV ECDLVVNLDLPTDSIHYAHRAGRTGRLGR+GTV+++CE+ EVFVVKK+++
Sbjct: 472 ELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQK 531
Query: 2078 QLGVSVQACDFVEGQLVIKQEE 2143
QL V +QAC+F EG+LVI +EE
Sbjct: 532 QLAVPIQACEFTEGRLVIGKEE 553
>ref|XP_004290722.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47B-like [Fragaria
vesca subsp. vesca]
Length = 550
Score = 660 bits (1703), Expect = 0.0
Identities = 339/497 (68%), Positives = 400/497 (80%), Gaps = 5/497 (1%)
Frame = +2
Query: 671 VEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXX 850
+E KE+ EV T L S + K KAKV R ++ A + LEVD++LF+AKSFS
Sbjct: 48 IELVDKKETNEV-TRLSSFKDVPKSKAKVVRSTVIKAAGAQSSLEVDSSLFNAKSFSELG 106
Query: 851 XXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLA 1030
GF +PTDVQST+IPTI+K+HDVVIQSYTGSGKTLAYLLPILSEVGPL
Sbjct: 107 LPPLLIERLESQGFRTPTDVQSTAIPTILKDHDVVIQSYTGSGKTLAYLLPILSEVGPLK 166
Query: 1031 KK-TPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQE 1207
++ + ++ KR DIEAVIVAPSRELGMQIVRE EK+LGP K+ VQQLVGGANRSRQE
Sbjct: 167 ERPSDGGGENGKRTDIEAVIVAPSRELGMQIVREFEKILGPANKKTVQQLVGGANRSRQE 226
Query: 1208 EALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHVG 1387
EALKKNKP IVVGTPGRIAEISA GKLHTHGCRFLVLDEVD+LL+FNFREDMHRILEHVG
Sbjct: 227 EALKKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDQLLSFNFREDMHRILEHVG 286
Query: 1388 RKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVSP 1567
RK+ A+ L KR ERQTI+VSATVPFSV+RAA SWGRDP+LV+AK + PL+S+SP
Sbjct: 287 RKSSADSHGPKGSLGKRAERQTILVSATVPFSVIRAASSWGRDPLLVQAKNVIPLDSISP 346
Query: 1568 SG----PVNISALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFV 1735
SG P N + NS Q +A ESLPPSLKH+YCV+KLQHKVD LRRC++AL+A+ V
Sbjct: 347 SGPGTLPGNSISTNSTSNLQGHSAIESLPPSLKHYYCVTKLQHKVDALRRCVHALNAKSV 406
Query: 1736 IVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARG 1915
I FMN+ RQLKDTV+KL+ARG+ A ELHGDL KL R T +KKFK GE+++LVTNEL+ARG
Sbjct: 407 IAFMNHTRQLKDTVFKLEARGMTASELHGDLGKLGRATTMKKFKKGEVRILVTNELSARG 466
Query: 1916 LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSV 2095
LDV ECDLVVNLDLPTD+IHYAHRAGRTGRLGRKGTV+ +CE+SEVFVV+KL++QLG+ +
Sbjct: 467 LDVAECDLVVNLDLPTDTIHYAHRAGRTGRLGRKGTVVTMCEESEVFVVRKLQKQLGIPI 526
Query: 2096 QACDFVEGQLVIKQEER 2146
AC+F EG+LVI +EE+
Sbjct: 527 SACEFTEGKLVITEEEK 543
>ref|XP_002303572.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222841004|gb|EEE78551.1| DEAD/DEAH box helicase family
protein [Populus trichocarpa]
Length = 563
Score = 659 bits (1699), Expect = 0.0
Identities = 363/617 (58%), Positives = 437/617 (70%), Gaps = 6/617 (0%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFS-ISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVT 487
MP++VS RLLFLVG+++ +SR S AL S+ F S
Sbjct: 1 MPSLVSPRLLFLVGETIHLKKLSR----------------GSSSALCQRSVRFFS----- 39
Query: 488 RHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPN 667
R D+ K P T LGF +E + T K+ R K KV P
Sbjct: 40 RVDRDKNAP-------LTLANLGFNTEFETTTKNKRNK------------LENVKVNYP- 79
Query: 668 RVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXX 847
+EA K + KVA N+ VKK LE+++ F+AKSFS
Sbjct: 80 --------------------IEAPKSREKVATSNKSRVVRVKKTLEIESAPFAAKSFSEL 119
Query: 848 XXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPL 1027
+ GF PTDVQS +IPTI+KNHD VIQSYTGSGKTLAY+LPILSEVGPL
Sbjct: 120 GLPPPLIERLEREGFNVPTDVQSAAIPTILKNHDAVIQSYTGSGKTLAYVLPILSEVGPL 179
Query: 1028 AKKTPNRE-DSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQ 1204
+ + ++ K+ +IEAV+VAPSREL MQIVREVEKLLGP KR VQQLVGGANRSRQ
Sbjct: 180 KNNYSSADKETGKKTEIEAVVVAPSRELAMQIVREVEKLLGPENKRVVQQLVGGANRSRQ 239
Query: 1205 EEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHV 1384
EEALKKNKP IVVGTPGRIAEISA GKLHTHGCRFLVLDEVDELL+FNFR+D+HRILEHV
Sbjct: 240 EEALKKNKPLIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDELLSFNFRQDIHRILEHV 299
Query: 1385 GRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVS 1564
GR++GA+P+ + L + +R+TIMVSATVPFSVVRAARSW DP+LV+AK + PLES++
Sbjct: 300 GRRSGADPQGQKNSLVRWADRRTIMVSATVPFSVVRAARSWACDPLLVQAKSVIPLESLA 359
Query: 1565 PSGPVNISALNSAPTG----QTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARF 1732
P G VN+S+ S+ Q QA +SLPP+LKH+YCV++LQHKVDTLRRC++AL+A+
Sbjct: 360 P-GTVNLSSPTSSSNSDSNLQHQATVQSLPPALKHYYCVTRLQHKVDTLRRCVHALNAQS 418
Query: 1733 VIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAAR 1912
VI FMN+ RQLKD V+KL+ARG+KA ELHGDL KL R+TILKKFK GE++VLVTNELAAR
Sbjct: 419 VIAFMNHTRQLKDAVFKLEARGMKAAELHGDLGKLGRSTILKKFKSGEVRVLVTNELAAR 478
Query: 1913 GLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVS 2092
GLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTV+ +CE+ EVFVVKKL++QLGV
Sbjct: 479 GLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEEREVFVVKKLQKQLGVP 538
Query: 2093 VQACDFVEGQLVIKQEE 2143
+ ACDF EG+L++ +E
Sbjct: 539 IPACDFTEGKLIVTDKE 555
>ref|XP_004147988.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like
[Cucumis sativus] gi|449519613|ref|XP_004166829.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 47,
mitochondrial-like [Cucumis sativus]
Length = 555
Score = 657 bits (1694), Expect = 0.0
Identities = 355/620 (57%), Positives = 424/620 (68%), Gaps = 8/620 (1%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPF-SISRTCYXXXXXXXXXXXXXXQ--SGALTLESLGFRSERQ 481
M A+V RL G+S PF + + C + G LTL SLGF+SE Q
Sbjct: 1 MNALVPGRLFLFAGESFPFHKLPQVCRSTFFHSGVFCLNKAEVNHGPLTLASLGFKSEFQ 60
Query: 482 VTRHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLR 661
T KS++ A+ D P++
Sbjct: 61 ETD-----------------------KSQVNKVAELDTPRDI------------------ 79
Query: 662 PNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFS 841
+K K K+ R N+ + + +E+ F+AKSFS
Sbjct: 80 -------------------------SKSKVKIVRNNEKKVGGARSSVEIQMAPFAAKSFS 114
Query: 842 XXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVG 1021
GFT PTD+QS SIPTI+K HDVVIQSYTGSGKTLAY+LPILSE+G
Sbjct: 115 ELGLADALIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIG 174
Query: 1022 PLAKKTPNREDS-SKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRS 1198
P N D K+K+IEAVIVAPSRELGMQIVREVEK+LGP ++ VQQLVGGANRS
Sbjct: 175 PFKNTISNYNDEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRS 234
Query: 1199 RQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILE 1378
RQEEALKKNKP IVVGTPGRIAEISATGKLHTHGC FL+LDEVDELL+FNFREDMHRILE
Sbjct: 235 RQEEALKKNKPSIVVGTPGRIAEISATGKLHTHGCSFLILDEVDELLSFNFREDMHRILE 294
Query: 1379 HVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLES 1558
HVGR++GA R + + A+R ERQ +MVSATVPFSVVRAA+SWG DP+LVKA K++PLES
Sbjct: 295 HVGRRSGANSRGSENTQARRAERQLVMVSATVPFSVVRAAKSWGFDPLLVKANKVAPLES 354
Query: 1559 VSPSGPVNISALNSAPTG----QTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDA 1726
V PSGPVN+ A +S T Q+Q A ++LPPSLKH+YC S+LQHKVD LRRCI+ALDA
Sbjct: 355 VPPSGPVNLRAPSSGSTSDSTLQSQTAIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDA 414
Query: 1727 RFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELA 1906
+FV+VFMN+ +QL+D V+KL ARG+ A ELHGDL KLAR+T LK FK GEL+VLVTNEL+
Sbjct: 415 KFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELS 474
Query: 1907 ARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLG 2086
ARGLD+ ECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVL++CE+ EVFVVKKL++QLG
Sbjct: 475 ARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVLSICEEPEVFVVKKLQKQLG 534
Query: 2087 VSVQACDFVEGQLVIKQEER 2146
V + ACDF EG+LV+ +EE+
Sbjct: 535 VPILACDFNEGKLVLNEEEK 554
>ref|XP_002509744.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223549643|gb|EEF51131.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 595
Score = 654 bits (1687), Expect = 0.0
Identities = 359/625 (57%), Positives = 433/625 (69%), Gaps = 9/625 (1%)
Frame = +2
Query: 305 VKMPAIVSARLLFLVGDSLPFS----ISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRS 472
+KMPA+VS RLLFL G S P +SRT + Q+ LTLESLG +S
Sbjct: 30 LKMPALVSTRLLFLFGLSSPLPKLLRVSRTGWCHRNVLFYSQVRQDQA-PLTLESLGIKS 88
Query: 473 ERQVTRHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAK 652
+ + K ++ T KH++ K+
Sbjct: 89 QFER-------------------------KEKITKTNKHEKFKQN--------------- 108
Query: 653 VLRPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAK 832
SA++ + K KV +V K LE +T LF+AK
Sbjct: 109 -----------------------SAIDVPRSKVKVVNKG-TRDVSVNKSLEDETALFAAK 144
Query: 833 SFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILS 1012
SFS GF PT+VQS +IPTI+KNHDVVIQSYTGSGKTLAYLLPILS
Sbjct: 145 SFSELGLPPLLLERLESEGFKVPTEVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILS 204
Query: 1013 EVGPLA-KKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGA 1189
EVGPL K + E+ K+ +IEAVIVAPSREL MQIVREVEKLLGP K+AVQQLVGGA
Sbjct: 205 EVGPLIDKSSKGNEEVGKKSEIEAVIVAPSRELAMQIVREVEKLLGPANKKAVQQLVGGA 264
Query: 1190 NRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHR 1369
NRSRQEEAL+KNKP I+VGTPGRI+EISA GKLHTHGCR+LVLDEVDELL+FNFRED+HR
Sbjct: 265 NRSRQEEALRKNKPAIIVGTPGRISEISAAGKLHTHGCRYLVLDEVDELLSFNFREDVHR 324
Query: 1370 ILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISP 1549
IL+HVGR++ A+ LA+R RQTI+VSATVPFSV+RAARSWG DP+LV+AK + P
Sbjct: 325 ILDHVGRRSNADSHGPNSQLARRAARQTILVSATVPFSVIRAARSWGHDPLLVQAKTVIP 384
Query: 1550 LESVSPSGPVN----ISALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYA 1717
LESV S PVN IS+ +S Q QAA +SLPP+LKH+YCV+++QHKVDTLRRC++A
Sbjct: 385 LESVPASRPVNASGPISSSSSNSNPQPQAAIQSLPPALKHYYCVTRIQHKVDTLRRCVHA 444
Query: 1718 LDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTN 1897
LDA+ VI FMN RQLKD V+KL+ARG+KA ELHGDL KL+R+TILKKFK GE++VLVTN
Sbjct: 445 LDAKSVIAFMNQTRQLKDAVFKLEARGMKAAELHGDLGKLSRSTILKKFKNGEVRVLVTN 504
Query: 1898 ELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLER 2077
EL+ARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTV+ +CE+SEVFVVKK+++
Sbjct: 505 ELSARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKMQK 564
Query: 2078 QLGVSVQACDFVEGQLVIKQEERAK 2152
QLG+++ C+F EG+L + EE K
Sbjct: 565 QLGITIPTCEFTEGKLSMTVEEEKK 589
>ref|NP_001047522.1| Os02g0636300 [Oryza sativa Japonica Group]
gi|75323584|sp|Q6H874.1|RH47A_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 47A
gi|49387967|dbj|BAD25075.1| DEAD/DEAH box helicase-like
[Oryza sativa Japonica Group]
gi|113537053|dbj|BAF09436.1| Os02g0636300 [Oryza sativa
Japonica Group] gi|215713571|dbj|BAG94708.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222623309|gb|EEE57441.1| hypothetical protein
OsJ_07650 [Oryza sativa Japonica Group]
Length = 573
Score = 636 bits (1641), Expect = e-179
Identities = 349/616 (56%), Positives = 426/616 (69%), Gaps = 7/616 (1%)
Frame = +2
Query: 317 AIVSARLLFLVGDSLPF---SISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVT 487
A+ S+R F++GD LPF S+ R +SG LTL SL +++ +
Sbjct: 14 ALASSRSCFVLGDHLPFRMLSLPRVVRFHQTAWHDIQTVEDKSGPLTLASLEVQNKVEYV 73
Query: 488 RHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPN 667
+ ++ AT+TG G K +A+A + +PK
Sbjct: 74 KKER------------ATRTG-GIKPSSRASALNMKPK---------------------- 98
Query: 668 RVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXX 847
+ F+A + K A P A +KK L++D +LFSAKSF
Sbjct: 99 --------------VSSFNA-----KPVKSALPKS---AVLKKTLKIDESLFSAKSFEEL 136
Query: 848 XXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPL 1027
K G T+PT+VQS +IP I + HD VIQSYTGSGKTLAYLLPILSE+GPL
Sbjct: 137 GLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPL 196
Query: 1028 AKKTPNREDSS-KRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQ 1204
K P +DSS KR +EAVIVAPSRELGMQIVREVEK+LGP +KR VQQLVGGANRSRQ
Sbjct: 197 --KRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQ 254
Query: 1205 EEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHV 1384
EEALKKNKP IVVGTPGRI+EISA GKLHTH CRFLVLDEVD+LL+FN+REDMHRILEHV
Sbjct: 255 EEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHV 314
Query: 1385 GRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVS 1564
GRK+G R PLA+R ERQTI+VSAT+PFSV+RAARSWG DPVLV+A + PLES++
Sbjct: 315 GRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLESIT 374
Query: 1565 PSGPV---NISALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFV 1735
PV + NS QAA +SLPPSL+H+YC SK QHKVDTLRRCI+AL+A+ V
Sbjct: 375 VPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALEAQTV 434
Query: 1736 IVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARG 1915
I FMNN + LKD V+KL+ARG+KA ELHGDL KLAR+T+LKKFK GE +VLVTNEL+ARG
Sbjct: 435 IAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARG 494
Query: 1916 LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSV 2095
LDVPECDLV+NLDLPTDS HYAHRAGRTGRLGRKGTV+ +CE++E FVV+K+ +QL V +
Sbjct: 495 LDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPI 554
Query: 2096 QACDFVEGQLVIKQEE 2143
+ C+F EG+L++ +EE
Sbjct: 555 KPCEFTEGKLLVHKEE 570
>ref|XP_002454221.1| hypothetical protein SORBIDRAFT_04g026990 [Sorghum bicolor]
gi|241934052|gb|EES07197.1| hypothetical protein
SORBIDRAFT_04g026990 [Sorghum bicolor]
Length = 573
Score = 635 bits (1639), Expect = e-179
Identities = 328/504 (65%), Positives = 397/504 (78%), Gaps = 3/504 (0%)
Frame = +2
Query: 641 RKAKVLRPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTL 820
+K KV R + + SL V + S V K A+ ++ A +KK L+VD +
Sbjct: 76 KKEKVARTAVPKPSSRASSLNVKPKVSSNV-------KPAKSALMKSAGIKKTLKVDEAM 128
Query: 821 FSAKSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLL 1000
FSAKSF K G T+PT+VQS +IP I + HDVVIQSYTGSGKTLAYLL
Sbjct: 129 FSAKSFEELGLPPLLVDQLNKEGLTAPTEVQSAAIPIIAQKHDVVIQSYTGSGKTLAYLL 188
Query: 1001 PILSEVGPLAKKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLV 1180
PILSE+GPL K+T +++S KR +EAVIVAPSRELGMQIVREVEK+LGP++KR VQQLV
Sbjct: 189 PILSEIGPL-KRTMEQDNSEKRSGVEAVIVAPSRELGMQIVREVEKILGPSDKRLVQQLV 247
Query: 1181 GGANRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFRED 1360
GGANRSRQEEALKKNKP IVVGTPGRI+EISA GKLHTHGCRFLVLDEVD+LL+FN+RED
Sbjct: 248 GGANRSRQEEALKKNKPLIVVGTPGRISEISAAGKLHTHGCRFLVLDEVDQLLSFNYRED 307
Query: 1361 MHRILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKK 1540
MHRILEHVGR++GA R PLA+R ERQTI+VSAT+PFSV+RAARSWG DPVL++AK
Sbjct: 308 MHRILEHVGRRSGATSRDVLGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLIRAKS 367
Query: 1541 ISPLESVS-PSGPVNISALNSAPTGQT--QAASESLPPSLKHFYCVSKLQHKVDTLRRCI 1711
+ PL+SV+ P ++ S NS Q+ QAA SLPPSL+H+YC +K QHKVDTLRRCI
Sbjct: 368 VVPLDSVTVPRPALSQSDANSTSPSQSVNQAAVGSLPPSLEHYYCTAKAQHKVDTLRRCI 427
Query: 1712 YALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLV 1891
+AL+A+ VI FMNN + LKD V+KL+ARGIKA ELHGDL KLAR+T+LKKFK GE +VLV
Sbjct: 428 HALEAQTVIAFMNNTKPLKDVVFKLEARGIKATELHGDLGKLARSTVLKKFKDGEFRVLV 487
Query: 1892 TNELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKL 2071
TNEL+ARGLDVPECDLVVNLDLPTDS HYAHRAGRTGRLGRKG V+ +CE++E FVV+K+
Sbjct: 488 TNELSARGLDVPECDLVVNLDLPTDSTHYAHRAGRTGRLGRKGIVVTICEENEGFVVRKM 547
Query: 2072 ERQLGVSVQACDFVEGQLVIKQEE 2143
+QL V+++ C+F EG+LV+ +E+
Sbjct: 548 RKQLAVAIKPCEFTEGELVVHKED 571
>gb|EXB56020.1| DEAD-box ATP-dependent RNA helicase 47 [Morus notabilis]
Length = 676
Score = 635 bits (1638), Expect = e-179
Identities = 327/509 (64%), Positives = 398/509 (78%), Gaps = 14/509 (2%)
Frame = +2
Query: 662 PNRVEAAGVKESLEVDTTLFSAVEATKRK---------AKVARPNQVEPAAVKKPLEVDT 814
P + + G+K +E TT + E KR K R N ++ A +K +E++
Sbjct: 164 PLTLASVGIKSVIE--TTEPAETEKVKRLNSRPEVPKGKKAVRSNVIKSAGKQKTVEIEA 221
Query: 815 TLFSAKSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAY 994
F+AKSFS GF +PTDVQS +IP I+K HD VIQSYTGSGKTLAY
Sbjct: 222 APFAAKSFSELGLSQTLIERLESEGFMTPTDVQSAAIPLILKGHDAVIQSYTGSGKTLAY 281
Query: 995 LLPILSEVGPLAKKTPNRE-DSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQ 1171
LLPIL++VGPL KKT + K+ DIEAV+VAPSRELGMQIVRE EK+LGP KRAVQ
Sbjct: 282 LLPILADVGPLKKKTSGGGGEPGKKTDIEAVVVAPSRELGMQIVREFEKILGPANKRAVQ 341
Query: 1172 QLVGGANRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNF 1351
QLVGGANRSRQEEALKKNKP IVVGTPGRIAEISA GKLHTHGC++LVLDEVDELL+FNF
Sbjct: 342 QLVGGANRSRQEEALKKNKPLIVVGTPGRIAEISAAGKLHTHGCQYLVLDEVDELLSFNF 401
Query: 1352 REDMHRILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVK 1531
REDMHRILEHVG ++G++PR + LAKR ERQTI+VSATVPFSV+RAARSWG DP+LV+
Sbjct: 402 REDMHRILEHVGSRSGSDPRESKSSLAKRVERQTILVSATVPFSVIRAARSWGHDPLLVQ 461
Query: 1532 AKKISPLESVSPSGPV----NISALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTL 1699
AKK+ LESV +GP+ ++ +S+ Q A ESLPPSLKH++CV++LQHKVDTL
Sbjct: 462 AKKVIRLESVPQTGPIIPSKPTTSSSSSSNLQGPPAVESLPPSLKHYHCVTRLQHKVDTL 521
Query: 1700 RRCIYALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGEL 1879
RRC++ALDA+ VIVFMN+ +QLKD V+KL+ARG+ A ELHGDL KLAR+T +KKFK GE+
Sbjct: 522 RRCVHALDAKSVIVFMNHTKQLKDAVFKLEARGMSAMELHGDLGKLARSTTMKKFKRGEV 581
Query: 1880 KVLVTNELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFV 2059
+VLVTNEL+ARGLDV ECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTV+ +CE+ E+FV
Sbjct: 582 RVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRPGTVVTLCEEPEIFV 641
Query: 2060 VKKLERQLGVSVQACDFVEGQLVIKQEER 2146
VKKL++QLGV + AC F+EG+L++ ++E+
Sbjct: 642 VKKLQKQLGVPIPACQFIEGKLIVTEDEK 670
>gb|ACG27628.1| EMB1586 [Zea mays] gi|223946723|gb|ACN27445.1| unknown [Zea mays]
Length = 573
Score = 634 bits (1636), Expect = e-179
Identities = 328/504 (65%), Positives = 395/504 (78%), Gaps = 3/504 (0%)
Frame = +2
Query: 641 RKAKVLRPNRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTL 820
+K K+ R + + SL V + S V K A+ ++PA +KK L+VD L
Sbjct: 75 KKGKMERTGGPKPSSRASSLYVKPKVSSNV-------KPAKSALMKPAGIKKTLKVDEAL 127
Query: 821 FSAKSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLL 1000
FSAKSF K G T+PT+VQS +IP I + HDVVIQSYTGSGKTLAYLL
Sbjct: 128 FSAKSFEELGLPPLLVDQLNKEGLTAPTEVQSAAIPIIAQKHDVVIQSYTGSGKTLAYLL 187
Query: 1001 PILSEVGPLAKKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLV 1180
PILS++GPL K+T ++ S KR IEAVIVAPSRELGMQIVREVEK+LGP +KR VQQLV
Sbjct: 188 PILSDIGPL-KRTMEQDHSEKRSGIEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLV 246
Query: 1181 GGANRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFRED 1360
GGANRSRQEEALKKNKP IVVGTPGRI+EISA GKLHTHGCRFLVLDEVD+LL+FN+RED
Sbjct: 247 GGANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHGCRFLVLDEVDQLLSFNYRED 306
Query: 1361 MHRILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKK 1540
MHRILEHVGR+ G R PLA+R ERQTI+VSAT+PFSV+RAARSWG DPVL++AK
Sbjct: 307 MHRILEHVGRRPGGTSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLIRAKS 366
Query: 1541 ISPLESVS-PSGPVNISALNSAPTGQT--QAASESLPPSLKHFYCVSKLQHKVDTLRRCI 1711
+ PL+S++ P ++ S N + + Q+ QAA SLPPSL+H+YC +K QHKVDTLRRCI
Sbjct: 367 VVPLDSITVPRPALSQSDANPSSSSQSVNQAAVGSLPPSLEHYYCTAKAQHKVDTLRRCI 426
Query: 1712 YALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLV 1891
+AL+A+ VI FMNN + LKD V+KL+ARGIKA ELHGDL KLAR+T+LKKFK GE +VLV
Sbjct: 427 HALEAQTVIAFMNNTKPLKDVVFKLEARGIKATELHGDLGKLARSTVLKKFKDGEFRVLV 486
Query: 1892 TNELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKL 2071
TNEL+ARGLDVPECDLVVNLDLPTDS HYAHRAGRTGRLGRKG V+ +CE+SE FVV+K+
Sbjct: 487 TNELSARGLDVPECDLVVNLDLPTDSTHYAHRAGRTGRLGRKGIVVTICEESEGFVVRKM 546
Query: 2072 ERQLGVSVQACDFVEGQLVIKQEE 2143
+QL V+++ C+F EG+LV+ +EE
Sbjct: 547 RKQLDVAIKPCEFTEGELVVHKEE 570
>ref|XP_006647573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47A-like [Oryza
brachyantha]
Length = 578
Score = 634 bits (1635), Expect = e-179
Identities = 350/616 (56%), Positives = 429/616 (69%), Gaps = 7/616 (1%)
Frame = +2
Query: 317 AIVSARLLFLVGDSLPF---SISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVT 487
A+ S+R F++GD LPF S+ R +SG LTL SL +S+ +
Sbjct: 19 ALASSRSCFVLGDHLPFRMFSLPRAVRFHQTAWRGTEAVEHKSGPLTLASLEVQSKVEYG 78
Query: 488 RHDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPN 667
+ ++ A T G KS +A++ H +PK
Sbjct: 79 KKER------------AANTR-GPKSSSRASSLHMKPK---------------------- 103
Query: 668 RVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXX 847
+ F+A + AK A P A VKK L++D +LFSAKSF
Sbjct: 104 --------------VSSFNA-----KPAKSAFPKS---AVVKKTLKIDESLFSAKSFEEL 141
Query: 848 XXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPL 1027
K G T+PT+VQS +IP I + HD VIQSYTG+GKTLAYLLPILSE+GPL
Sbjct: 142 GLPPLLIDRLNKEGLTAPTEVQSAAIPIISQRHDAVIQSYTGAGKTLAYLLPILSEIGPL 201
Query: 1028 AKKTPNREDSS-KRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQ 1204
K P EDSS KR ++AVIVAPSRELGMQIVREVEK+LGP +KR VQQLVGGANRSRQ
Sbjct: 202 --KRPTEEDSSDKRSGVDAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQ 259
Query: 1205 EEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHV 1384
EEALKKNKP IVVGTPGRI+EISA GKL THGCRFLVLDEVD+LL+FN+REDMHRILEHV
Sbjct: 260 EEALKKNKPIIVVGTPGRISEISAAGKLQTHGCRFLVLDEVDQLLSFNYREDMHRILEHV 319
Query: 1385 GRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVS 1564
GRK+G R PLA+R ERQTI+VSAT+PFSV+RAARSWG DPVLV+A + PL+S++
Sbjct: 320 GRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLDSIT 379
Query: 1565 PSGPV--NISALNSAPTGQ-TQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFV 1735
PV A +S+P+ QAA +SLPPSL+H+YC SK QHKVDTLRRCI+AL+A+ V
Sbjct: 380 VPRPVLSQTDANSSSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALEAQTV 439
Query: 1736 IVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARG 1915
I FMNN + LKD V+KL+ARG+KA ELHGDL KLAR+T+LK+FK GE +VLVTNEL+ARG
Sbjct: 440 IAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKRFKDGEFRVLVTNELSARG 499
Query: 1916 LDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSV 2095
LDVPECDLV+NLDLPTDS HYAHRAGRTGRLGRKGTV+ +CE++E FVV+K+ +QL V +
Sbjct: 500 LDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPI 559
Query: 2096 QACDFVEGQLVIKQEE 2143
+ C+F EG+L+I++EE
Sbjct: 560 KPCEFTEGKLLIQKEE 575
>ref|XP_004953210.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47A-like [Setaria
italica]
Length = 583
Score = 632 bits (1630), Expect = e-178
Identities = 324/508 (63%), Positives = 393/508 (77%), Gaps = 7/508 (1%)
Frame = +2
Query: 641 RKAKVLRPNRVEAAGVKESLEVDTTLFSAVEATKR----KAKVARPNQVEPAAVKKPLEV 808
+K K+ R + + SL V + S++ R K A+ + +KK L+V
Sbjct: 74 KKEKMARTGGPKPSSRGSSLNVKPRVSSSLNMKPRVSSLNVKPAKSALPKSTGIKKTLKV 133
Query: 809 DTTLFSAKSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTL 988
D LFSAKSF K G T+PT+VQS +IP I + HDVVIQSYTGSGKTL
Sbjct: 134 DEALFSAKSFEELGLPPLLVDRLNKEGLTAPTEVQSAAIPIIAQKHDVVIQSYTGSGKTL 193
Query: 989 AYLLPILSEVGPLAKKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAV 1168
AYLLPILSE+GPL K+ +++S KR IEAVI+APSRELGMQIVREVEK+LGP +KR V
Sbjct: 194 AYLLPILSEIGPL-KRPMEQDNSEKRSGIEAVIIAPSRELGMQIVREVEKILGPNDKRLV 252
Query: 1169 QQLVGGANRSRQEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFN 1348
QQLVGGANRSRQEEALKKNKP IVVGTPGRI+EISA GKLHTHGCRFLVLDEVD+LL+FN
Sbjct: 253 QQLVGGANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHGCRFLVLDEVDQLLSFN 312
Query: 1349 FREDMHRILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLV 1528
+REDMHRILEHVG+K G R PLA+R ERQTI+VSAT+PFSV+RAARSWG DPVL+
Sbjct: 313 YREDMHRILEHVGKKPGTTSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLI 372
Query: 1529 KAKKISPLESVSPSGPV--NISALNSAPTGQ-TQAASESLPPSLKHFYCVSKLQHKVDTL 1699
+AK + PL+S++ P A +S+P+ QAA SLPPSL+H+YC +K+QHKVDTL
Sbjct: 373 RAKSVLPLDSITVPRPALSQTDANSSSPSNSVNQAAVGSLPPSLEHYYCTAKVQHKVDTL 432
Query: 1700 RRCIYALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGEL 1879
RRCI+AL+A+ VI FMNN + LKD V+KL+ARGIKA ELHGDL KLAR+T+LKKFK GE
Sbjct: 433 RRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGIKATELHGDLGKLARSTVLKKFKDGEF 492
Query: 1880 KVLVTNELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFV 2059
+VLVTNEL+ARGLDVPECDLVVNLDLPTDS HYAHRAGRTGRLGRKG V+ +CE++E FV
Sbjct: 493 RVLVTNELSARGLDVPECDLVVNLDLPTDSTHYAHRAGRTGRLGRKGIVVTICEENEAFV 552
Query: 2060 VKKLERQLGVSVQACDFVEGQLVIKQEE 2143
V+K+ +QL V+++ C+F EG+LV+ +EE
Sbjct: 553 VRKMRKQLAVAIKPCEFTEGELVVHKEE 580
>ref|XP_002889966.1| EMB1586 [Arabidopsis lyrata subsp. lyrata]
gi|297335808|gb|EFH66225.1| EMB1586 [Arabidopsis lyrata
subsp. lyrata]
Length = 551
Score = 631 bits (1627), Expect = e-178
Identities = 315/497 (63%), Positives = 397/497 (79%), Gaps = 2/497 (0%)
Frame = +2
Query: 665 NRVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSX 844
N+ G ++++++ + + E + K K R ++++ KKP E+ + LFSAKSF
Sbjct: 57 NKPRKFGKSKAMKLEGSFVT--EMGQGKLKAVRNDKMKVVKEKKPAEIVSPLFSAKSFEE 114
Query: 845 XXXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGP 1024
+ GF+ PTDVQS ++P I+K HD VIQSYTGSGKTLAYLLPILSE+GP
Sbjct: 115 LGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGP 174
Query: 1025 LAKKT-PNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSR 1201
LA+K+ + ++ KR DI+A+IVAPSRELGMQIVREVEKLLGP +R VQQLVGGANR R
Sbjct: 175 LAEKSRSSHSENDKRTDIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMR 234
Query: 1202 QEEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEH 1381
QEEALKKNKP IVVGTPGRIAEIS +GKLHTHGCRFLVLDEVDELL+FNFRED+HRILEH
Sbjct: 235 QEEALKKNKPAIVVGTPGRIAEISKSGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEH 294
Query: 1382 VGRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESV 1561
VG+++GA P+ D +R RQTI+VSATVPFSV+RAA+SW +PVLV+A K++PL++V
Sbjct: 295 VGKRSGAGPKGEVD---ERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTV 351
Query: 1562 SPSGPV-NISALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFVI 1738
PS PV + + S GQ Q +SLPP+LKH+YC+SK QHKVDTLRRC++ALDA+ VI
Sbjct: 352 QPSAPVISFTPTTSEANGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVI 411
Query: 1739 VFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARGL 1918
FMN+ RQLKD VYKL+ARG+ + E+HGDL KL R+T+LKKFK GE+KVLVTNEL+ARGL
Sbjct: 412 AFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGL 471
Query: 1919 DVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQ 2098
DV ECDLVVNL+LPTD++HYAHRAGRTGRLGRKGTV+ VCE+S+VF+VKK+E+QLG+
Sbjct: 472 DVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFL 531
Query: 2099 ACDFVEGQLVIKQEERA 2149
C+FV+G+LV+ +E++A
Sbjct: 532 YCEFVDGELVVTEEDKA 548
>ref|NP_001049403.1| Os03g0219700 [Oryza sativa Japonica Group]
gi|122247355|sp|Q10PV9.1|RH47B_ORYSJ RecName:
Full=DEAD-box ATP-dependent RNA helicase 47B
gi|108706885|gb|ABF94680.1| DEAD/DEAH box helicase family
protein, putative, expressed [Oryza sativa Japonica
Group] gi|113547874|dbj|BAF11317.1| Os03g0219700 [Oryza
sativa Japonica Group] gi|125542928|gb|EAY89067.1|
hypothetical protein OsI_10553 [Oryza sativa Indica
Group] gi|125585426|gb|EAZ26090.1| hypothetical protein
OsJ_09947 [Oryza sativa Japonica Group]
gi|215701156|dbj|BAG92580.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 573
Score = 629 bits (1621), Expect = e-177
Identities = 315/468 (67%), Positives = 376/468 (80%), Gaps = 3/468 (0%)
Frame = +2
Query: 749 AKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXXXXXXXXXXXXKVGFTSPTDVQSTSIP 928
+K A+ + A VKK L++D +LFSAKSF K G ++PT+VQS +IP
Sbjct: 104 SKPAKSTLPKSAVVKKTLKIDESLFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIP 163
Query: 929 TIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLAKKTPNREDSSKRKDIEAVIVAPSREL 1108
I + HD VIQSYTGSGKTLAYLLPILSE+GPL + T ++ S KR +EAVIVAPSREL
Sbjct: 164 IISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPT-EQDGSDKRSGVEAVIVAPSREL 222
Query: 1109 GMQIVREVEKLLGPTEKRAVQQLVGGANRSRQEEALKKNKPYIVVGTPGRIAEISATGKL 1288
GMQIVREVEK+LGP +KR VQQLVGGANRSRQEEALKKNKP IVVGTPGRI+EISA GKL
Sbjct: 223 GMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKL 282
Query: 1289 HTHGCRFLVLDEVDELLAFNFREDMHRILEHVGRKAGAEPRSTTDPLAKRPERQTIMVSA 1468
HTHGCRFLVLDEVD+LL+FN+REDMHRILEHVGRK+G R PLA+R ERQTI+VSA
Sbjct: 283 HTHGCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSA 342
Query: 1469 TVPFSVVRAARSWGRDPVLVKAKKISPLESVSPSGPV---NISALNSAPTGQTQAASESL 1639
T+PFSV+RAARSWG DPVLV+A + PL+S++ PV + NS QAA SL
Sbjct: 343 TIPFSVIRAARSWGHDPVLVRAMSVVPLDSITVPRPVLSQTDANPNSPSNSVNQAAVNSL 402
Query: 1640 PPSLKHFYCVSKLQHKVDTLRRCIYALDARFVIVFMNNIRQLKDTVYKLDARGIKAEELH 1819
PPSL+H+YC+SK QHKVDTLRRCI+AL+A+ VI FMNN + LKD V+KL+ARG+KA ELH
Sbjct: 403 PPSLEHYYCISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELH 462
Query: 1820 GDLNKLARTTILKKFKGGELKVLVTNELAARGLDVPECDLVVNLDLPTDSIHYAHRAGRT 1999
GDL KLAR+T+LKKFK GE +VLVTNEL+ARGLDVPECDLV+NLDLPTDS HYAHRAGRT
Sbjct: 463 GDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRT 522
Query: 2000 GRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQACDFVEGQLVIKQEE 2143
GRLGRKGTV+ +CE++E FVV+K+ +QL V ++ C+F EG+L++ EE
Sbjct: 523 GRLGRKGTVVTICEETETFVVRKMRKQLAVPIKPCEFTEGKLLVHNEE 570
>ref|XP_004245636.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like
[Solanum lycopersicum]
Length = 548
Score = 627 bits (1618), Expect = e-177
Identities = 338/614 (55%), Positives = 423/614 (68%), Gaps = 4/614 (0%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFSISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVTR 490
MPA+V R L L+GDSL F T + SG+LTL SLG
Sbjct: 1 MPALVLTRALLLIGDSLAFR-KATQFTRIAPSQGNVRFLSSSGSLTLASLGL-------- 51
Query: 491 HDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPNR 670
KSE+K + +++ K + + ++ P R+ K
Sbjct: 52 -----------------------KSEVKTVSANEKNKLQQGISTIEVPKSREKK------ 82
Query: 671 VEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXX 850
+G K+ L + K P+++ T F+AKSFS
Sbjct: 83 -RVSGNKQGLVKE---------------------------KNPVDIMTAPFAAKSFSELG 114
Query: 851 XXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLA 1030
GFT PTDVQ+ ++PT++KNHDVVIQSYTGSGKTLAYLLPILS VGPL
Sbjct: 115 LPPLLVERLETEGFTIPTDVQAAAVPTVLKNHDVVIQSYTGSGKTLAYLLPILSRVGPLK 174
Query: 1031 KKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQEE 1210
++ P+ ++ + DIEAVIVAPSRELGMQIVREVEKLLGP K+ VQQLVGGANRSRQE+
Sbjct: 175 EELPDGYETGNKIDIEAVIVAPSRELGMQIVREVEKLLGPANKKLVQQLVGGANRSRQED 234
Query: 1211 ALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHVGR 1390
ALKKNKP IVVGTPGRIAEISA GKL THGCR+LVLDE+D+LLAF FREDM RIL+HVGR
Sbjct: 235 ALKKNKPDIVVGTPGRIAEISAAGKLPTHGCRYLVLDEIDQLLAFTFREDMKRILDHVGR 294
Query: 1391 KAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVSPS 1570
+ GA + PL KR RQTIMVSATVPFSV+RAARSWG DP+L++A K+ PLESV+PS
Sbjct: 295 RPGARGGESNSPLVKRAARQTIMVSATVPFSVIRAARSWGCDPLLIQANKVVPLESVTPS 354
Query: 1571 GPVNI----SALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFVI 1738
G VNI S +S+ + Q +SLPP+L+H+Y ++++QHKVD LRRC++ALDA+ VI
Sbjct: 355 GSVNIPGTPSTTDSSSSVQPMPDVQSLPPNLQHYYTITRIQHKVDMLRRCVHALDAKCVI 414
Query: 1739 VFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARGL 1918
FMN+ +QLKD V+KL+ARG+ A ELHGDL+KL R+TILKKF+ GE++VL+TNEL+ARGL
Sbjct: 415 AFMNHTKQLKDAVFKLEARGMNAAELHGDLSKLVRSTILKKFRNGEIRVLLTNELSARGL 474
Query: 1919 DVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQ 2098
D+PECDLVVNL LPTDS+HYAHRAGRTGRLGRKGTV+ +CE+SEVFVVKKL++QL +S++
Sbjct: 475 DLPECDLVVNLGLPTDSVHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKLQKQLSLSIE 534
Query: 2099 ACDFVEGQLVIKQE 2140
AC+F EG LVI ++
Sbjct: 535 ACEFSEGNLVIIED 548
>ref|XP_006358880.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial-like
[Solanum tuberosum]
Length = 548
Score = 627 bits (1617), Expect = e-177
Identities = 338/614 (55%), Positives = 423/614 (68%), Gaps = 4/614 (0%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFSISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVTR 490
MPA+V R L L+GDSL F T + SG+LTL SLG
Sbjct: 1 MPALVLTRALLLIGDSLAFR-KVTQFTRIAPSQGNVRFLSSSGSLTLASLGL-------- 51
Query: 491 HDKPKELPQVDTAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPNR 670
KSE+K + +++ K + + ++ P R+ K
Sbjct: 52 -----------------------KSEVKTVSANEKNKLQQGISTIEVPKSREKK------ 82
Query: 671 VEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXX 850
+G K+ L + K P+++ T F+AKSFS
Sbjct: 83 -RVSGNKQGLVKE---------------------------KNPVDIMTAPFAAKSFSELG 114
Query: 851 XXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLA 1030
K GFT PTDVQ+ ++PT++KNHDVVIQSYTGSGKTLAYLLPILS VGPL
Sbjct: 115 IPPLLVERLEKEGFTIPTDVQAAAVPTVLKNHDVVIQSYTGSGKTLAYLLPILSRVGPLK 174
Query: 1031 KKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQEE 1210
++ + ++ K+ DIEAVIVAPSRELGMQIVREVEKLLGP K+ VQQLVGGANRSRQE+
Sbjct: 175 EELSDGYETGKKIDIEAVIVAPSRELGMQIVREVEKLLGPANKKLVQQLVGGANRSRQED 234
Query: 1211 ALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHVGR 1390
AL+KNKP IVVGTPGRIAEISA GKL THGCRFLVLDE+D+LLAF FREDM RIL+HVGR
Sbjct: 235 ALRKNKPAIVVGTPGRIAEISAAGKLPTHGCRFLVLDEIDQLLAFTFREDMKRILDHVGR 294
Query: 1391 KAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVSPS 1570
+ GA + PL KR RQTIMVSATVPFSV+RAARSWG DP+L++A K+ P+ESV+P+
Sbjct: 295 RPGARGGESNSPLVKRAARQTIMVSATVPFSVIRAARSWGCDPLLIQANKVVPIESVTPA 354
Query: 1571 GPVNI----SALNSAPTGQTQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFVI 1738
G VNI S +S+ Q +SLPP+L+H+Y ++++QHKVD LRRC++ALDA+ VI
Sbjct: 355 GSVNIPGTPSTTDSSSNVQPMPDVQSLPPNLQHYYTITRIQHKVDMLRRCVHALDAKCVI 414
Query: 1739 VFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARGL 1918
FMN+ +QLKD V+KL+ARG+ A ELHGDL+KL R+TILKKF+ GE++VL+TNEL+ARGL
Sbjct: 415 AFMNHTKQLKDAVFKLEARGMNAAELHGDLSKLVRSTILKKFRNGEIRVLLTNELSARGL 474
Query: 1919 DVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQ 2098
D+PECDLVVNL LPTDS+HYAHRAGRTGRLGRKGTV+ +CE+SEVFVVKKL++QL +S+Q
Sbjct: 475 DLPECDLVVNLGLPTDSVHYAHRAGRTGRLGRKGTVVTICEESEVFVVKKLQKQLSLSIQ 534
Query: 2099 ACDFVEGQLVIKQE 2140
AC+F EG LVI ++
Sbjct: 535 ACEFSEGNLVIIED 548
>gb|ESW21142.1| hypothetical protein PHAVU_005G045400g [Phaseolus vulgaris]
Length = 557
Score = 627 bits (1617), Expect = e-177
Identities = 352/615 (57%), Positives = 424/615 (68%), Gaps = 4/615 (0%)
Frame = +2
Query: 311 MPAIVSARLLFLVGDSLPFSISRTCYXXXXXXXXXXXXXXQSGALTLESLGFRSERQVTR 490
MP ++S+R L LVG+SL + + R V
Sbjct: 1 MPTLISSRFLLLVGESLHLRRA-----------------------------LATSRSVLL 31
Query: 491 HDKPKELPQVD-TAVEATKTGLGFKSELKATAKHDRPKEYRQLGSVVEPIRRKAKVLRPN 667
H K + QV+ T + +GF++E +A + +Q GS E ++ K K
Sbjct: 32 HTSVKCMSQVEPNHGSLTLSSIGFQTETEA-GNRSTSNKVKQFGSPSENLKSKEKP---- 86
Query: 668 RVEAAGVKESLEVDTTLFSAVEATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXX 847
F E K+ +V Q+E A F+AKSF
Sbjct: 87 -----------------FGINEKKKKAVRVVEKQQIEFAP-----------FAAKSFPEL 118
Query: 848 XXXXXXXXXXXKVGFTSPTDVQSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPL 1027
K GFT PT+VQS ++PTI+ N DV+IQSYTGSGKTLAYLLPILS VGPL
Sbjct: 119 GLPHVLIERLQKEGFTVPTEVQSAAVPTILNNRDVIIQSYTGSGKTLAYLLPILSVVGPL 178
Query: 1028 -AKKTPNREDSSKRKDIEAVIVAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQ 1204
K + E++ K+ IEAVIVAPSRELGMQIVRE EK+LG KR VQQLVGGANR+RQ
Sbjct: 179 RGKGGDDGEENGKKLGIEAVIVAPSRELGMQIVREFEKVLGMDNKRVVQQLVGGANRTRQ 238
Query: 1205 EEALKKNKPYIVVGTPGRIAEISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHV 1384
EEALKKNKP IVVGTPGRIAE+SA+GKL THGCR+LVLDEVDELL+FNFREDMHRILEHV
Sbjct: 239 EEALKKNKPAIVVGTPGRIAELSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHV 298
Query: 1385 GRKAGAEPRSTTDPLAKRPERQTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVS 1564
GRK+ A+P S A + ERQ IMVSATVPFSVVRAARSWG DP+LV+AKKI PLE+VS
Sbjct: 299 GRKSNADPNSN----AGKSERQLIMVSATVPFSVVRAARSWGCDPLLVQAKKIVPLETVS 354
Query: 1565 PSGPVNISALNSAPTGQ--TQAASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFVI 1738
PS PV++S +S P +QAA ESLPP+LKH+YCV++LQHKVD LRRCI+ALDA+FVI
Sbjct: 355 PSEPVSLSR-SSLPNSAVPSQAAVESLPPALKHYYCVTRLQHKVDVLRRCIHALDAKFVI 413
Query: 1739 VFMNNIRQLKDTVYKLDARGIKAEELHGDLNKLARTTILKKFKGGELKVLVTNELAARGL 1918
FMN+ +QLKD V+KL+ARG+KA ELHGDL KLAR+T LKKFK GE++VLVTNEL+ARGL
Sbjct: 414 AFMNHTKQLKDVVFKLEARGMKAVELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGL 473
Query: 1919 DVPECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQ 2098
DV ECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVL +CE+ EVFVVKKL++QLG+ +
Sbjct: 474 DVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLKKQLGIPIV 533
Query: 2099 ACDFVEGQLVIKQEE 2143
+CDF EG+L++ +EE
Sbjct: 534 SCDFSEGKLLVTEEE 548
>ref|NP_172737.2| DEAD-box ATP-dependent RNA helicase 47 [Arabidopsis thaliana]
gi|108861896|sp|Q8W4E1.2|RH47_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 47,
mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE
1586; AltName: Full=Protein INCREASED SIZE EXCLUSION
LIMIT 1; Flags: Precursor
gi|12056979|gb|AAF88089.2|AC025417_17 T12C24.30
[Arabidopsis thaliana] gi|51969316|dbj|BAD43350.1|
similar to ATP-dependent RNA helicase [Arabidopsis
thaliana] gi|51969564|dbj|BAD43474.1| similar to
ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|51969644|dbj|BAD43514.1| similar to ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|51969728|dbj|BAD43556.1| similar to ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|51970230|dbj|BAD43807.1| similar to ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|51970530|dbj|BAD43957.1| similar to ATP-dependent RNA
helicase [Arabidopsis thaliana]
gi|110739597|dbj|BAF01707.1| hypothetical protein
[Arabidopsis thaliana] gi|110740002|dbj|BAF01905.1|
hypothetical protein [Arabidopsis thaliana]
gi|110740576|dbj|BAE98393.1| hypothetical protein
[Arabidopsis thaliana] gi|332190805|gb|AEE28926.1|
DEAD-box ATP-dependent RNA helicase 47 [Arabidopsis
thaliana]
Length = 551
Score = 626 bits (1615), Expect = e-176
Identities = 310/475 (65%), Positives = 386/475 (81%), Gaps = 2/475 (0%)
Frame = +2
Query: 731 EATKRKAKVARPNQVEPAAVKKPLEVDTTLFSAKSFSXXXXXXXXXXXXXKVGFTSPTDV 910
E + K + + ++++ KKP E+ + LFSAKSF + GF+ PTDV
Sbjct: 77 EMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLPDSLLDSLEREGFSVPTDV 136
Query: 911 QSTSIPTIMKNHDVVIQSYTGSGKTLAYLLPILSEVGPLAKKT-PNREDSSKRKDIEAVI 1087
QS ++P I+K HD VIQSYTGSGKTLAYLLPILSE+GPLA+K+ + ++ KR +I+A+I
Sbjct: 137 QSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKRTEIQAMI 196
Query: 1088 VAPSRELGMQIVREVEKLLGPTEKRAVQQLVGGANRSRQEEALKKNKPYIVVGTPGRIAE 1267
VAPSRELGMQIVREVEKLLGP +R VQQLVGGANR RQEEALKKNKP IVVGTPGRIAE
Sbjct: 197 VAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPAIVVGTPGRIAE 256
Query: 1268 ISATGKLHTHGCRFLVLDEVDELLAFNFREDMHRILEHVGRKAGAEPRSTTDPLAKRPER 1447
IS GKLHTHGCRFLVLDEVDELL+FNFRED+HRILEHVG+++GA P+ D +R R
Sbjct: 257 ISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRSGAGPKGEVD---ERANR 313
Query: 1448 QTIMVSATVPFSVVRAARSWGRDPVLVKAKKISPLESVSPSGPV-NISALNSAPTGQTQA 1624
QTI+VSATVPFSV+RAA+SW +PVLV+A K++PL++V PS PV +++ S GQ Q
Sbjct: 314 QTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAPVMSLTPTTSEADGQIQT 373
Query: 1625 ASESLPPSLKHFYCVSKLQHKVDTLRRCIYALDARFVIVFMNNIRQLKDTVYKLDARGIK 1804
+SLPP+LKH+YC+SK QHKVDTLRRC++ALDA+ VI FMN+ RQLKD VYKL+ARG+
Sbjct: 374 TIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFMNHSRQLKDVVYKLEARGMN 433
Query: 1805 AEELHGDLNKLARTTILKKFKGGELKVLVTNELAARGLDVPECDLVVNLDLPTDSIHYAH 1984
+ E+HGDL KL R+T+LKKFK GE+KVLVTNEL+ARGLDV ECDLVVNL+LPTD++HYAH
Sbjct: 434 SAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVNLELPTDAVHYAH 493
Query: 1985 RAGRTGRLGRKGTVLNVCEQSEVFVVKKLERQLGVSVQACDFVEGQLVIKQEERA 2149
RAGRTGRLGRKGTV+ VCE+S+VF+VKK+E+QLG+ C+FV+G+LV+ +E++A
Sbjct: 494 RAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFLYCEFVDGELVVTEEDKA 548