BLASTX nr result
ID: Rheum21_contig00000176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00000176
(404 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACN40194.1| unknown [Picea sitchensis] 142 5e-32
gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK213... 142 5e-32
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein... 142 6e-32
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1... 142 6e-32
ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 5... 142 6e-32
ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 4... 142 6e-32
ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, ... 142 6e-32
gb|AAA33700.1| Major Cab protein [Petunia x hybrida] 142 6e-32
gb|AAA33704.1| Major Cab protein [Petunia x hybrida] 142 6e-32
gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum] 142 6e-32
sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding pro... 142 6e-32
sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding pro... 142 6e-32
gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein ... 141 8e-32
gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brach... 141 8e-32
gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii] 141 8e-32
prf||1615137B chlorophyll a/b binding protein P27 141 1e-31
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote... 141 1e-31
emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta] 141 1e-31
ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 4... 141 1e-31
ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 4... 141 1e-31
>gb|ACN40194.1| unknown [Picea sitchensis]
Length = 274
Score = 142 bits (358), Expect = 5e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 260 NNNAWAYAT 268
>gb|ABK20976.1| unknown [Picea sitchensis] gi|116779697|gb|ABK21395.1| unknown
[Picea sitchensis] gi|116790882|gb|ABK25775.1| unknown
[Picea sitchensis] gi|148908056|gb|ABR17147.1| unknown
[Picea sitchensis] gi|148908517|gb|ABR17370.1| unknown
[Picea sitchensis] gi|224284311|gb|ACN39891.1| unknown
[Picea sitchensis] gi|224284945|gb|ACN40202.1| unknown
[Picea sitchensis] gi|224285575|gb|ACN40506.1| unknown
[Picea sitchensis] gi|224285579|gb|ACN40508.1| unknown
[Picea sitchensis]
Length = 274
Score = 142 bits (358), Expect = 5e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 260 NNNAWAYAT 268
>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
sylvestris]
Length = 265
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 251 NNNAWSYAT 259
>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
[Solanum tuberosum]
Length = 265
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 251 NNNAWSYAT 259
>ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 50, chloroplastic-like
[Solanum tuberosum]
Length = 267
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 253 NNNAWSYAT 261
>ref|XP_004303878.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 267
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 252
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 253 NNNAWSYAT 261
>ref|XP_004303877.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 267
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 252
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 253 NNNAWSYAT 261
>gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
Length = 76
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 2 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 61
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 62 NNNAWSYAT 70
>gb|AAA33704.1| Major Cab protein [Petunia x hybrida]
Length = 129
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 57 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 116
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 117 NNNAWSYAT 125
>gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
Length = 265
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 250
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 251 NNNAWSYAT 259
>sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
Precursor gi|20487|emb|CAA26209.1| unnamed protein
product [Petunia sp.]
Length = 267
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 252
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 253 NNNAWSYAT 261
>sp|P15193.1|CB2A_PINSY RecName: Full=Chlorophyll a-b binding protein type 2 member 1A,
chloroplastic; AltName: Full=Chlorophyll a-b binding
protein type II 1A; Short=CAB; AltName: Full=LHCP;
Flags: Precursor gi|20661|emb|CAA32657.1| unnamed
protein product [Pinus sylvestris]
Length = 278
Score = 142 bits (357), Expect = 6e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GG+FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 204 GGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 263
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 264 NNNAWAYAT 272
>gb|AFV34722.1| light harvesting chlorophyll a/b-binding protein 1-1 [Dendrocalamus
latiflorus]
Length = 265
Score = 141 bits (356), Expect = 8e-32
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 191 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 250
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 251 NNNAWAYAT 259
>gb|AGJ50622.1| chlorophyll a/b binding protein [Salicornia brachiata]
Length = 267
Score = 141 bits (356), Expect = 8e-32
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKEIKNGRLAMFSMFGFF+QAIVTGKGP+ENLADHLADPV
Sbjct: 193 GGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLADPV 252
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 253 NNNAWSYAT 261
>gb|AAC78690.1| chlorophyll a/b-binding protein [Pinus thunbergii]
Length = 274
Score = 141 bits (356), Expect = 8e-32
Identities = 67/69 (97%), Positives = 68/69 (98%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENL DHLADPV
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLTDHLADPV 259
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 260 NNNAWAYAT 268
>prf||1615137B chlorophyll a/b binding protein P27
Length = 233
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GG+FDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADH+ADPV
Sbjct: 159 GGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPV 218
Query: 182 NNNAWSYAT 208
NNNAW+YAT
Sbjct: 219 NNNAWAYAT 227
>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
sativum] gi|169055|gb|AAA33651.1| polypeptide 15
precursor [Pisum sativum] gi|223990|prf||1006296A
protein,chlorophyll a/b binding
Length = 269
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 195 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 254
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 255 NNNAWSYAT 263
>emb|CAC38830.1| chlorophyll a/b binding protein [Pinus contorta]
Length = 274
Score = 141 bits (355), Expect = 1e-31
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV
Sbjct: 200 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 259
Query: 182 NNNAWSYAT 208
+NNAW+YAT
Sbjct: 260 SNNAWAYAT 268
>ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 263
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 189 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 248
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 249 NNNAWSYAT 257
>ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 263
Score = 141 bits (355), Expect = 1e-31
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 2 GGSFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPV 181
GGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLADPV
Sbjct: 189 GGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV 248
Query: 182 NNNAWSYAT 208
NNNAWSYAT
Sbjct: 249 NNNAWSYAT 257