BLASTX nr result
ID: Rheum21_contig00000087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00000087
(1107 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 131 6e-28
gb|AFW65850.1| WW domain-binding protein 11 [Zea mays] 131 6e-28
gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 131 6e-28
gb|EMJ01765.1| hypothetical protein PRUPE_ppa009808mg [Prunus pe... 129 3e-27
ref|XP_006396542.1| hypothetical protein EUTSA_v10028986mg [Eutr... 127 8e-27
ref|XP_006288716.1| hypothetical protein CARUB_v10002027mg [Caps... 127 8e-27
gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana] g... 127 8e-27
ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [A... 127 8e-27
ref|XP_002304170.1| proline-rich family protein [Populus trichoc... 126 1e-26
ref|XP_002874880.1| hypothetical protein ARALYDRAFT_911890 [Arab... 126 2e-26
gb|EXB29124.1| U1 small nuclear ribonucleoprotein C [Morus notab... 125 2e-26
ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc... 125 2e-26
ref|XP_006588606.1| PREDICTED: U1 small nuclear ribonucleoprotei... 125 3e-26
gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus... 125 3e-26
gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein is... 125 3e-26
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein is... 125 3e-26
gb|AAO44073.1| At4g03120 [Arabidopsis thaliana] gi|110743941|dbj... 125 3e-26
ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group] g... 125 3e-26
ref|XP_003536302.1| PREDICTED: U1 small nuclear ribonucleoprotei... 125 3e-26
ref|XP_003520224.1| PREDICTED: U1 small nuclear ribonucleoprotei... 125 3e-26
>gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 322
Score = 131 bits (329), Expect = 6e-28
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = -1
Query: 1029 HWTNFRDFALILGFSDRVLLL--CSQFTAAQRSICTMPRYYCDYCDTYLTHDSPSVRKQH 856
HW FR ++ + L S A S+ MPRYYCDYCDTYLTHDSPSVRKQH
Sbjct: 158 HWQGFRAQQSLVSLAPTPLATETRSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQH 217
Query: 855 NAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
NAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 218 NAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 250
>gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 131 bits (329), Expect = 6e-28
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = -1
Query: 1029 HWTNFRDFALILGFSDRVLLL--CSQFTAAQRSICTMPRYYCDYCDTYLTHDSPSVRKQH 856
HW FR ++ + L S A S+ MPRYYCDYCDTYLTHDSPSVRKQH
Sbjct: 158 HWQGFRAQQSLVSLAPTPLATETRSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQH 217
Query: 855 NAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
NAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 218 NAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 250
>gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 345
Score = 131 bits (329), Expect = 6e-28
Identities = 64/93 (68%), Positives = 68/93 (73%), Gaps = 2/93 (2%)
Frame = -1
Query: 1029 HWTNFRDFALILGFSDRVLLL--CSQFTAAQRSICTMPRYYCDYCDTYLTHDSPSVRKQH 856
HW FR ++ + L S A S+ MPRYYCDYCDTYLTHDSPSVRKQH
Sbjct: 158 HWQGFRAQQSLVSLAPTPLATETRSPSPALPSSVAAMPRYYCDYCDTYLTHDSPSVRKQH 217
Query: 855 NAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
NAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 218 NAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 250
>gb|EMJ01765.1| hypothetical protein PRUPE_ppa009808mg [Prunus persica]
Length = 276
Score = 129 bits (323), Expect = 3e-27
Identities = 64/88 (72%), Positives = 69/88 (78%), Gaps = 4/88 (4%)
Frame = -1
Query: 1008 FALILGFSDRVLLLCSQFTAAQRSIC----TMPRYYCDYCDTYLTHDSPSVRKQHNAGYK 841
F L LGFS V L F+ + C MPRYYCDYCDTYLTHDSPSVRKQHNAGYK
Sbjct: 41 FFLSLGFSGLVQL--HYFSILNPNYCKEFRAMPRYYCDYCDTYLTHDSPSVRKQHNAGYK 98
Query: 840 HKANVRIYYQQFEEQQTQSLIDQRIKEH 757
HKANVR+YYQ+FEEQQTQSL+DQRIKEH
Sbjct: 99 HKANVRLYYQKFEEQQTQSLVDQRIKEH 126
>ref|XP_006396542.1| hypothetical protein EUTSA_v10028986mg [Eutrema salsugineum]
gi|557097559|gb|ESQ37995.1| hypothetical protein
EUTSA_v10028986mg [Eutrema salsugineum]
Length = 193
Score = 127 bits (319), Expect = 8e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 57
>ref|XP_006288716.1| hypothetical protein CARUB_v10002027mg [Capsella rubella]
gi|482557422|gb|EOA21614.1| hypothetical protein
CARUB_v10002027mg [Capsella rubella]
Length = 193
Score = 127 bits (319), Expect = 8e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 57
>gb|AAD14440.1| putative C-type U1 snRNP [Arabidopsis thaliana]
gi|7270182|emb|CAB77797.1| putative C-type U1 snRNP
[Arabidopsis thaliana]
Length = 112
Score = 127 bits (319), Expect = 8e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 57
>ref|NP_567250.1| C2H2 and C2HC zinc finger-containing protein [Arabidopsis thaliana]
gi|75217907|sp|Q56XE4.1|RU1C_ARATH RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C gi|62320807|dbj|BAD93742.1|
putative C-type U1 snRNP [Arabidopsis thaliana]
gi|332656876|gb|AEE82276.1| C2H2 and C2HC zinc
finger-containing protein [Arabidopsis thaliana]
Length = 207
Score = 127 bits (319), Expect = 8e-27
Identities = 57/57 (100%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 57
>ref|XP_002304170.1| proline-rich family protein [Populus trichocarpa]
gi|222841602|gb|EEE79149.1| proline-rich family protein
[Populus trichocarpa]
Length = 202
Score = 126 bits (317), Expect = 1e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQS+IDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEH 57
>ref|XP_002874880.1| hypothetical protein ARALYDRAFT_911890 [Arabidopsis lyrata subsp.
lyrata] gi|297320717|gb|EFH51139.1| hypothetical protein
ARALYDRAFT_911890 [Arabidopsis lyrata subsp. lyrata]
Length = 194
Score = 126 bits (316), Expect = 2e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIK+H
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKQH 57
>gb|EXB29124.1| U1 small nuclear ribonucleoprotein C [Morus notabilis]
Length = 250
Score = 125 bits (315), Expect = 2e-26
Identities = 60/73 (82%), Positives = 63/73 (86%)
Frame = -1
Query: 975 LLLCSQFTAAQRSICTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQ 796
LLL +F + + MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQ
Sbjct: 34 LLLLLEFRLQRTA---MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQ 90
Query: 795 QTQSLIDQRIKEH 757
QTQSLIDQRIKEH
Sbjct: 91 QTQSLIDQRIKEH 103
>ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C-1-like [Setaria italica]
Length = 265
Score = 125 bits (315), Expect = 2e-26
Identities = 57/69 (82%), Positives = 60/69 (86%)
Frame = -1
Query: 963 SQFTAAQRSICTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQS 784
S ++ + MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQS
Sbjct: 27 SPSSSTPAAAAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQS 86
Query: 783 LIDQRIKEH 757
LIDQRIKEH
Sbjct: 87 LIDQRIKEH 95
>ref|XP_006588606.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X2
[Glycine max] gi|571481278|ref|XP_006588607.1|
PREDICTED: U1 small nuclear ribonucleoprotein C-like
isoform X3 [Glycine max]
Length = 207
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>gb|ESW16562.1| hypothetical protein PHAVU_007G166600g [Phaseolus vulgaris]
Length = 204
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein isoform 2 [Theobroma
cacao]
Length = 195
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>gb|AAO44073.1| At4g03120 [Arabidopsis thaliana] gi|110743941|dbj|BAE99804.1|
putative C-type U1 snRNP [Arabidopsis thaliana]
Length = 207
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 57/57 (100%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIY+QQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLIDQRIKEH 57
>ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|50251962|dbj|BAD27897.1| putative u1 small nuclear
ribonucleoprotein C [Oryza sativa Japonica Group]
gi|113536034|dbj|BAF08417.1| Os02g0266100 [Oryza sativa
Japonica Group] gi|125581580|gb|EAZ22511.1| hypothetical
protein OsJ_06175 [Oryza sativa Japonica Group]
gi|215686377|dbj|BAG87638.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215707035|dbj|BAG93495.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 228
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>ref|XP_003536302.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Glycine max]
Length = 206
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57
>ref|XP_003520224.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Glycine max]
Length = 206
Score = 125 bits (314), Expect = 3e-26
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = -1
Query: 927 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 757
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEH
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEH 57