BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00000042
         (217 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006410587.1| hypothetical protein EUTSA_v10017088mg [Eutr...    73   4e-11
sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding pro...    72   6e-11
ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 4...    72   6e-11
gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassi...    72   6e-11
ref|XP_006304391.1| hypothetical protein CARUB_v10010908mg [Caps...    72   8e-11
ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245...    72   1e-10
gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum l...    72   1e-10
sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding pro...    72   1e-10
gb|AFO67221.1| putative chlorophyll a/b binding protein, partial...    72   1e-10
ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3...    71   1e-10
ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3...    71   2e-10
ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3...    71   2e-10
sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding pro...    71   2e-10
ref|NP_174286.1| chlorophyll A/B binding protein 1 [Arabidopsis ...    71   2e-10
ref|XP_002519724.1| chlorophyll A/B binding protein, putative [R...    71   2e-10
ref|XP_002524616.1| chlorophyll A/B binding protein, putative [R...    71   2e-10
gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Bras...    71   2e-10
gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]     71   2e-10
ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, ...    70   2e-10
ref|XP_006415537.1| hypothetical protein EUTSA_v10008476mg [Eutr...    70   3e-10

>ref|XP_006410587.1| hypothetical protein EUTSA_v10017088mg [Eutrema salsugineum]
           gi|557111756|gb|ESQ52040.1| hypothetical protein
           EUTSA_v10017088mg [Eutrema salsugineum]
          Length = 266

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 38/55 (69%), Positives = 41/55 (74%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP++SE+FG GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVFGTGRVTMRKT----AKPTGPSGSPWYG 51


>sp|P13851.1|CB21_SINAL RecName: Full=Chlorophyll a-b binding protein 1, chloroplastic;
           AltName: Full=LHCII type I CAB-1; Short=LHCP; Flags:
           Precursor gi|21138|emb|CAA34459.1| unnamed protein
           product [Sinapis alba] gi|21140|emb|CAA33903.1|
           chlorophyll a/b-binding polypeptide [Sinapis alba]
          Length = 266

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP +SE+FG GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKT----VKPTGPSGSPWYG 51


>ref|XP_004294267.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 267

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 39/55 (70%), Positives = 42/55 (76%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA+SAMALSSP  AG+AVKLSPS+S LFGEGRVTMRKT          SGSPWYG
Sbjct: 1   MASSAMALSSPSLAGQAVKLSPSTSTLFGEGRVTMRKT--AAKSKNVSSGSPWYG 53


>gb|AAL67432.1|AF458406_1 chlorophyll a/b binding protein [Brassica oleracea]
          Length = 266

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP +SE+FG GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKT----VKPTGPSGSPWYG 51


>ref|XP_006304391.1| hypothetical protein CARUB_v10010908mg [Capsella rubella]
           gi|482573102|gb|EOA37289.1| hypothetical protein
           CARUB_v10010908mg [Capsella rubella]
          Length = 267

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP+SSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPASSEVLGSGRVTMRKT---VAKPKGPSGSPWYG 52


>ref|XP_004234241.1| PREDICTED: uncharacterized protein LOC101245729 [Solanum
           lycopersicum]
          Length = 554

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 288 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKT--ATKAKPASSGSPWYG 340



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 37/55 (67%), Positives = 39/55 (70%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSS  FAGKAVKLSPSSSE+ G GR+TMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSSTFAGKAVKLSPSSSEISGNGRITMRKT--AAKPKPASSGSPWYG 53


>gb|AAA34148.1| chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum]
          Length = 267

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKT--ATKAKPASSGSPWYG 53


>sp|P07369.1|CB2G_SOLLC RecName: Full=Chlorophyll a-b binding protein 3C, chloroplastic;
           AltName: Full=LHCII type I CAB-3C; Short=LHCP; Flags:
           Precursor gi|224932|prf||1204205G protein 3C,chlorophyll
           binding
          Length = 267

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKT--ATKAKPASSGSPWYG 53


>gb|AFO67221.1| putative chlorophyll a/b binding protein, partial [Aralia elata]
          Length = 152

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVK++PSSSELFG GR++MRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPSFAGKAVKVAPSSSELFGNGRISMRKT---GKKPVASSGSPWYG 52


>ref|XP_006356078.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEVTGNGRVTMRKT--ATKAKPASSGSPWYG 53


>ref|XP_006356077.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MATSTMALSSSSFAGKAVKLSPSSSEITGNGRVTMRKT--AAKAKPASSGSPWYG 53


>ref|XP_006356075.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like
           isoform X1 [Solanum tuberosum]
          Length = 267

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 39/55 (70%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSS  FAGKAVKLSPSSSE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MATSTMALSSSSFAGKAVKLSPSSSEITGNGRVTMRKT--ATKAKPASSGSPWYG 53


>sp|P27495.1|CB24_TOBAC RecName: Full=Chlorophyll a-b binding protein 40, chloroplastic;
           AltName: Full=LHCII type I CAB-40; Short=LHCP; Flags:
           Precursor gi|19829|emb|CAA36958.1| unnamed protein
           product [Nicotiana tabacum]
          Length = 267

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSPSSSE+ G G+VTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKT--ASKAKTVSSGSPWYG 53


>ref|NP_174286.1| chlorophyll A/B binding protein 1 [Arabidopsis thaliana]
           gi|115783|sp|P04778.1|CB1C_ARATH RecName:
           Full=Chlorophyll a-b binding protein 1, chloroplastic;
           AltName: Full=Chlorophyll a-b protein 140;
           Short=CAB-140; AltName: Full=LHCII type I CAB-1; Flags:
           Precursor gi|9972353|gb|AAG10603.1|AC008030_3 Putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|16226883|gb|AAL16289.1|AF428359_1 At1g29930/F1N18_23
           [Arabidopsis thaliana] gi|16376|emb|CAA27543.1|
           chlorophyll a/b binding protein (LHCP AB 140)
           [Arabidopsis thaliana] gi|15010744|gb|AAK74031.1|
           At1g29930/F1N18_23 [Arabidopsis thaliana]
           gi|15293003|gb|AAK93612.1| putative photosystem II type
           I chlorophyll a/b binding protein [Arabidopsis thaliana]
           gi|16648807|gb|AAL25594.1| At1g29930/F1N18_23
           [Arabidopsis thaliana] gi|20258873|gb|AAM14108.1|
           putative chlorophyll a/b-binding protein [Arabidopsis
           thaliana] gi|332193030|gb|AEE31151.1| chlorophyll a-b
           binding protein 1 [Arabidopsis thaliana]
          Length = 267

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/55 (67%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP++SE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKT---VAKPKGPSGSPWYG 52


>ref|XP_002519724.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223541141|gb|EEF42697.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSSP FAGKAVKLSPS+ EL G GRV+MRKT          SGSPWYG
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKT----AAKSVSSGSPWYG 51


>ref|XP_002524616.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536169|gb|EEF37824.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 38/55 (69%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MATS MALSSP FAGKAVKLSPS+ EL G GRV+MRKT          SGSPWYG
Sbjct: 1   MATSTMALSSPSFAGKAVKLSPSAPELMGNGRVSMRKT----AAKNVSSGSPWYG 51


>gb|ABG29728.1| chloroplast chlorophyll a/b binding protein [Brassica napus]
          Length = 267

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/55 (67%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP++SE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKT---VAKPKGPSGSPWYG 52


>gb|AAP44089.1| chlorophyll a/b binding protein [Brassica oleracea]
          Length = 273

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/55 (67%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVKLSP++SE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKT---VAKPKGPSGSPWYG 52


>ref|XP_004145734.1| PREDICTED: chlorophyll a-b binding protein, chloroplastic-like
           [Cucumis sativus] gi|449525484|ref|XP_004169747.1|
           PREDICTED: chlorophyll a-b binding protein,
           chloroplastic-like [Cucumis sativus]
          Length = 267

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 36/55 (65%), Positives = 42/55 (76%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S+MALSSP FAG+AVKLSP++S+L GEGR+TMRKT          SGSPWYG
Sbjct: 1   MAASSMALSSPSFAGQAVKLSPTASDLLGEGRITMRKT--AGKPKPVSSGSPWYG 53


>ref|XP_006415537.1| hypothetical protein EUTSA_v10008476mg [Eutrema salsugineum]
           gi|557093308|gb|ESQ33890.1| hypothetical protein
           EUTSA_v10008476mg [Eutrema salsugineum]
          Length = 267

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 36/55 (65%), Positives = 40/55 (72%)
 Frame = +3

Query: 51  MATSAMALSSPVFAGKAVKLSPSSSELFGEGRVTMRKTXXXXXXXXXXSGSPWYG 215
           MA S MALSSP FAGKAVK+SP++SE+ G GRVTMRKT          SGSPWYG
Sbjct: 1   MAASTMALSSPAFAGKAVKISPAASEVLGSGRVTMRKT---VAKPKGPSGSPWYG 52