BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00027915
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022866658.1| probable DNA-directed RNA polymerase III sub...    57   2e-07
ref|XP_022844239.1| DNA-directed RNA polymerase III subunit rpc6...    57   6e-07
ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6...    57   6e-07
gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus imp...    56   1e-06
ref|XP_020550620.1| DNA-directed RNA polymerase III subunit RPC6...    55   4e-06

>ref|XP_022866658.1| probable DNA-directed RNA polymerase III subunit RPC6 [Olea
           europaea var. sylvestris]
          Length = 147

 Score = 57.0 bits (136), Expect = 2e-07
 Identities = 31/43 (72%), Positives = 33/43 (76%)
 Frame = -2

Query: 200 SSHKRKRPEKYPSGPVDAERTILDLIKSKKHLGICVREIKQET 72
           SS KRKRPE  P G VDAER IL+ IKSKK LGI VR+IK ET
Sbjct: 10  SSLKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVRDIKHET 52


>ref|XP_022844239.1| DNA-directed RNA polymerase III subunit rpc6-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 231

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 31/43 (72%), Positives = 33/43 (76%)
 Frame = -2

Query: 200 SSHKRKRPEKYPSGPVDAERTILDLIKSKKHLGICVREIKQET 72
           SS KRKRPE  P G VDAER IL+ IKSKK LGI VR+IK ET
Sbjct: 8   SSLKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVRDIKHET 50


>ref|XP_022844231.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844232.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844233.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844234.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844235.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844236.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844237.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
 ref|XP_022844238.1| DNA-directed RNA polymerase III subunit RPC6-like isoform X1 [Olea
           europaea var. sylvestris]
          Length = 239

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 31/43 (72%), Positives = 33/43 (76%)
 Frame = -2

Query: 200 SSHKRKRPEKYPSGPVDAERTILDLIKSKKHLGICVREIKQET 72
           SS KRKRPE  P G VDAER IL+ IKSKK LGI VR+IK ET
Sbjct: 8   SSLKRKRPEVDPLGLVDAERAILNAIKSKKDLGIWVRDIKHET 50


>gb|PIN15632.1| RNA polymerase III, subunit C34 [Handroanthus impetiginosus]
          Length = 240

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 30/48 (62%), Positives = 37/48 (77%)
 Frame = -2

Query: 215 SLVSLSSHKRKRPEKYPSGPVDAERTILDLIKSKKHLGICVREIKQET 72
           SL S SS KRKRPEK P+G VDAER +L++IKSKK LGI   +I ++T
Sbjct: 4   SLGSPSSLKRKRPEKDPTGLVDAERAVLNVIKSKKDLGIWAGDIAKDT 51


>ref|XP_020550620.1| DNA-directed RNA polymerase III subunit RPC6-like [Sesamum indicum]
 ref|XP_020550621.1| DNA-directed RNA polymerase III subunit RPC6-like [Sesamum indicum]
          Length = 239

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 32/48 (66%), Positives = 34/48 (70%)
 Frame = -2

Query: 215 SLVSLSSHKRKRPEKYPSGPVDAERTILDLIKSKKHLGICVREIKQET 72
           SLVS  S KRKRPE  P G +DAER ILD IK KK LG   R+IKQET
Sbjct: 4   SLVS-PSLKRKRPETGPPGLIDAERAILDSIKGKKDLGNWARDIKQET 50