BLASTX nr result

ID: Rehmannia32_contig00027060 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00027060
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN04195.1| hypothetical protein CDL12_23271 [Handroanthus im...    67   3e-10
ref|XP_011082048.1| golgin subfamily B member 1 isoform X3 [Sesa...    60   8e-08
ref|XP_011082047.1| golgin subfamily B member 1 isoform X2 [Sesa...    60   8e-08
ref|XP_011082045.1| golgin subfamily B member 1 isoform X1 [Sesa...    60   8e-08
ref|XP_012855821.1| PREDICTED: LOW QUALITY PROTEIN: nuclear mito...    58   5e-07

>gb|PIN04195.1| hypothetical protein CDL12_23271 [Handroanthus impetiginosus]
          Length = 2684

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +1

Query: 217 MEKNKNRTDLLQAGRKKLQQFRQ-XXXXXXXXXXXXXXXXXXRDTTTASATEAVVIQEHA 393
           M+KNKNRTDLL AGRKKLQQFRQ                   RDTT  +  EA V ++HA
Sbjct: 1   MDKNKNRTDLLAAGRKKLQQFRQKKDSKGSNSRSSGKAGKSGRDTTVETVPEAAVTEQHA 60

Query: 394 AEGERSIHDA 423
           AEGERS H++
Sbjct: 61  AEGERSTHNS 70


>ref|XP_011082048.1| golgin subfamily B member 1 isoform X3 [Sesamum indicum]
          Length = 2772

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = +1

Query: 217 MEKNKNRTDLLQAGRKKLQQFRQ-XXXXXXXXXXXXXXXXXXRDTTTASATEA----VVI 381
           M+K+KNRTDLL AGRKKLQQFRQ                   RDTT  +A EA     V 
Sbjct: 1   MDKSKNRTDLLAAGRKKLQQFRQKKDGKGSNSRSSGKAGKAGRDTTVGAAAEAEAESAVT 60

Query: 382 QEHAAEGERSIHD 420
           Q+HAA+ ERS HD
Sbjct: 61  QQHAADEERSTHD 73


>ref|XP_011082047.1| golgin subfamily B member 1 isoform X2 [Sesamum indicum]
          Length = 2775

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = +1

Query: 217 MEKNKNRTDLLQAGRKKLQQFRQ-XXXXXXXXXXXXXXXXXXRDTTTASATEA----VVI 381
           M+K+KNRTDLL AGRKKLQQFRQ                   RDTT  +A EA     V 
Sbjct: 1   MDKSKNRTDLLAAGRKKLQQFRQKKDGKGSNSRSSGKAGKAGRDTTVGAAAEAEAESAVT 60

Query: 382 QEHAAEGERSIHD 420
           Q+HAA+ ERS HD
Sbjct: 61  QQHAADEERSTHD 73


>ref|XP_011082045.1| golgin subfamily B member 1 isoform X1 [Sesamum indicum]
 ref|XP_020549817.1| golgin subfamily B member 1 isoform X1 [Sesamum indicum]
          Length = 2780

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 37/73 (50%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
 Frame = +1

Query: 217 MEKNKNRTDLLQAGRKKLQQFRQ-XXXXXXXXXXXXXXXXXXRDTTTASATEA----VVI 381
           M+K+KNRTDLL AGRKKLQQFRQ                   RDTT  +A EA     V 
Sbjct: 1   MDKSKNRTDLLAAGRKKLQQFRQKKDGKGSNSRSSGKAGKAGRDTTVGAAAEAEAESAVT 60

Query: 382 QEHAAEGERSIHD 420
           Q+HAA+ ERS HD
Sbjct: 61  QQHAADEERSTHD 73


>ref|XP_012855821.1| PREDICTED: LOW QUALITY PROTEIN: nuclear mitotic apparatus protein 1
           [Erythranthe guttata]
          Length = 2579

 Score = 58.2 bits (139), Expect = 5e-07
 Identities = 34/66 (51%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
 Frame = +1

Query: 217 MEKNKNRTDLLQAGRKKLQQFRQ-XXXXXXXXXXXXXXXXXXRDTTTASATEAVVIQEHA 393
           M KNKNRTDLL AGR+KLQQFRQ                    DTT  +ATEA V Q+HA
Sbjct: 1   MGKNKNRTDLLAAGREKLQQFRQKKDNKGNTSKSSGKAGKPGLDTTATAATEAAVTQQHA 60

Query: 394 AEGERS 411
            +GE S
Sbjct: 61  EDGESS 66


Top