BLASTX nr result

ID: Rehmannia32_contig00026841 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026841
         (453 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07625.1| Transcription factor Abd-B, contains HOX domain [...    91   2e-18
ref|XP_020548539.1| zinc finger CCCH domain-containing protein 5...    89   9e-18
ref|XP_011072878.1| uncharacterized protein LOC105157993 isoform...    89   9e-18

>gb|PIN07625.1| Transcription factor Abd-B, contains HOX domain [Handroanthus
           impetiginosus]
          Length = 1396

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 59/130 (45%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
 Frame = -1

Query: 387 FLTSDPFGSSVLFMRQHSYIRSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDILS 208
           FLTSDPFGSS L MR HSY +  G                                D LS
Sbjct: 169 FLTSDPFGSSSLSMRHHSYPQQAGPLPPPPLPPPPPSSRPEIPPLPPSLPPS----DFLS 224

Query: 207 KNDRGHDM-DLLDGDNVMLERSPPVKTTEDRNLQQDEFPCHYTEKNVPKMESVDAVAAHS 31
           KND      DLLDG N+ML    P K  +D +  Q E P    E NVPK+ SVDA+AA S
Sbjct: 225 KNDGSRSSKDLLDGANLMLGHPYPAKPVDDGSAHQIEVPGQLVETNVPKVASVDALAAIS 284

Query: 30  PADSDMDMED 1
           PADSDMDMED
Sbjct: 285 PADSDMDMED 294


>ref|XP_020548539.1| zinc finger CCCH domain-containing protein 55 isoform X2 [Sesamum
           indicum]
          Length = 1401

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
 Frame = -1

Query: 387 FLTSDPFGSSVLFMRQHSYIRSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDILS 208
           FL SDPF SSVL MRQH +++  G                                D+LS
Sbjct: 175 FLMSDPFESSVLTMRQHCHLQPTGPLPPPPPPPLPPPPSSPPGVPPHPPSSPPS--DVLS 232

Query: 207 KNDRGHDM--DLLDGDNVMLERSPPVKTTEDRNLQQDEFPCHYTEKNVPKMESVDAVAAH 34
           KN     +  + LDGDN MLE   PVK  EDR++ Q E  C +TEKN  K+E  DA   H
Sbjct: 233 KNGGSCSLKEEPLDGDNSMLECLAPVKPVEDRSVPQIEVLCQHTEKNGNKVELADADVTH 292

Query: 33  SPADSDMDMED 1
           SPADSDMDMED
Sbjct: 293 SPADSDMDMED 303


>ref|XP_011072878.1| uncharacterized protein LOC105157993 isoform X1 [Sesamum indicum]
 ref|XP_011072880.1| uncharacterized protein LOC105157993 isoform X1 [Sesamum indicum]
 ref|XP_020548537.1| uncharacterized protein LOC105157993 isoform X1 [Sesamum indicum]
          Length = 1429

 Score = 89.4 bits (220), Expect = 9e-18
 Identities = 57/131 (43%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
 Frame = -1

Query: 387 FLTSDPFGSSVLFMRQHSYIRSMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDILS 208
           FL SDPF SSVL MRQH +++  G                                D+LS
Sbjct: 175 FLMSDPFESSVLTMRQHCHLQPTGPLPPPPPPPLPPPPSSPPGVPPHPPSSPPS--DVLS 232

Query: 207 KNDRGHDM--DLLDGDNVMLERSPPVKTTEDRNLQQDEFPCHYTEKNVPKMESVDAVAAH 34
           KN     +  + LDGDN MLE   PVK  EDR++ Q E  C +TEKN  K+E  DA   H
Sbjct: 233 KNGGSCSLKEEPLDGDNSMLECLAPVKPVEDRSVPQIEVLCQHTEKNGNKVELADADVTH 292

Query: 33  SPADSDMDMED 1
           SPADSDMDMED
Sbjct: 293 SPADSDMDMED 303


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