BLASTX nr result
ID: Rehmannia32_contig00026825
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00026825
(376 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK47688.1| unknown [Medicago truncatula] 80 5e-16
ref|XP_010248971.1| PREDICTED: uncharacterized protein LOC104591... 77 6e-16
ref|XP_011098809.1| uncharacterized protein LOC105177379 [Sesamu... 82 9e-16
ref|XP_014494633.1| small ribosomal subunit biogenesis GTPase Rs... 81 3e-15
ref|XP_010470649.1| PREDICTED: uncharacterized protein LOC104750... 80 4e-15
ref|XP_003601802.1| ribosome biogenesis GTPase RsgA, putative [M... 80 6e-15
ref|XP_020215981.1| uncharacterized protein LOC109799769 [Cajanu... 80 6e-15
dbj|GAV61512.1| DUF258 domain-containing protein [Cephalotus fol... 80 6e-15
ref|XP_004310066.1| PREDICTED: uncharacterized protein LOC101305... 80 6e-15
ref|XP_017405583.1| PREDICTED: putative ribosome biogenesis GTPa... 80 8e-15
ref|XP_006601901.1| PREDICTED: putative ribosome biogenesis GTPa... 80 8e-15
ref|XP_024193443.1| small ribosomal subunit biogenesis GTPase Rs... 80 8e-15
ref|XP_022874765.1| small ribosomal subunit biogenesis GTPase Rs... 80 8e-15
ref|XP_022560805.1| small ribosomal subunit biogenesis GTPase Rs... 79 9e-15
gb|ESQ28565.1| hypothetical protein EUTSA_v10019531mg [Eutrema s... 79 1e-14
ref|NP_176911.2| Minichromosome maintenance (MCM2/3/5) family pr... 79 1e-14
gb|AAC18791.1| Similar to hypothetical 41.9KD protein gb|1001369... 79 1e-14
ref|XP_015076955.1| PREDICTED: putative ribosome biogenesis GTPa... 79 1e-14
ref|XP_015076954.1| PREDICTED: putative ribosome biogenesis GTPa... 79 1e-14
ref|XP_019083221.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 79 1e-14
>gb|AFK47688.1| unknown [Medicago truncatula]
Length = 217
Score = 80.5 bits (197), Expect = 5e-16
Identities = 48/89 (53%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGS+D VDRR M +NVF++ S +LD PVANVDH+L FSL+QPK EP++
Sbjct: 123 RVMVGDKVLVGSVDWVDRRAMIENVFQRNSEMLDPPVANVDHLLV--LFSLDQPKLEPFT 180
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQKL 4
L G LT+ALNKT+LV++++
Sbjct: 181 LTRFLVEAESTGIPLTLALNKTELVDKEV 209
>ref|XP_010248971.1| PREDICTED: uncharacterized protein LOC104591698 [Nelumbo nucifera]
Length = 499
Score = 77.0 bits (188), Expect(3) = 6e-16
Identities = 49/88 (55%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G +VLVGSID VDRR M +NVF + S I D PVANVDH+L FS+EQPK EP+S
Sbjct: 147 RVLVGDRVLVGSIDWVDRRGMIENVFDRSSEIADPPVANVDHLLV--LFSMEQPKPEPFS 204
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK+ LV+++
Sbjct: 205 LTRFLVEAESTGIPLTLALNKSDLVDEE 232
Score = 27.3 bits (59), Expect(3) = 6e-16
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -1
Query: 331 APPQANFMRIVVNSTLKP 278
A QANFMR++V ST +P
Sbjct: 92 AAAQANFMRVIVQSTCEP 109
Score = 26.9 bits (58), Expect(3) = 6e-16
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 374 SHDDNPPLTKNQAIG 330
S DD PPL++NQAIG
Sbjct: 75 SLDDGPPLSQNQAIG 89
>ref|XP_011098809.1| uncharacterized protein LOC105177379 [Sesamum indicum]
Length = 480
Score = 81.6 bits (200), Expect(2) = 9e-16
Identities = 52/87 (59%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF++KS ILD PVANVDH+L FSLEQPK EP+
Sbjct: 131 RVLVGDKVLVGSIDWVDRRGMIENVFQRKSEILDPPVANVDHLLV--LFSLEQPKIEPFM 188
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQ 10
L G LT+ALNK +LV++
Sbjct: 189 LTRFLVEAESTGIPLTLALNKAELVDE 215
Score = 29.3 bits (64), Expect(2) = 9e-16
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1
Query: 331 APPQANFMRIVVNSTLKP*EYAS 263
A QANFMR+VVNS +P + AS
Sbjct: 90 ASSQANFMRVVVNSASQPEDSAS 112
>ref|XP_014494633.1| small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
[Vigna radiata var. radiata]
Length = 473
Score = 80.9 bits (198), Expect = 3e-15
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGS+D VDRR +NVF + S ILD PVANVDH+L FSLEQP+ EP++
Sbjct: 126 RVMVGDKVLVGSVDWVDRRGWIENVFHRSSEILDPPVANVDHLLV--LFSLEQPRPEPFT 183
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQKLV 1
L G LT+ALNKT+LV+Q+++
Sbjct: 184 LTRFLVEAESTGIPLTLALNKTELVDQEVI 213
>ref|XP_010470649.1| PREDICTED: uncharacterized protein LOC104750543 [Camelina sativa]
Length = 494
Score = 80.5 bits (197), Expect = 4e-15
Identities = 51/91 (56%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF ++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 145 RVLVGDKVLVGSIDWVDRRGMIENVFHRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 202
Query: 87 Y*VLGVG*IDGNS----LTIALNKTKLVEQK 7
L ++ S LT+ALNKT+L+ Q+
Sbjct: 203 ---LTRFLVEAESTRIPLTLALNKTELISQE 230
>ref|XP_003601802.1| ribosome biogenesis GTPase RsgA, putative [Medicago truncatula]
gb|AES72053.1| ribosome biogenesis GTPase RsgA, putative [Medicago truncatula]
Length = 471
Score = 80.1 bits (196), Expect = 6e-15
Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGS+D VDRR M +NVF++ S +LD PVANVDH+L FSL+QPK EP++
Sbjct: 123 RVMVGDKVLVGSVDWVDRRAMIENVFQRNSEMLDPPVANVDHLLV--LFSLDQPKLEPFT 180
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNKT+LV+++
Sbjct: 181 LTRFLVEAESTGIPLTLALNKTELVDKE 208
>ref|XP_020215981.1| uncharacterized protein LOC109799769 [Cajanus cajan]
gb|KYP75688.1| hypothetical protein KK1_019883 [Cajanus cajan]
Length = 472
Score = 80.1 bits (196), Expect = 6e-15
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGSID VDRR M +NVF + S ILD PVANVDH+L FSLEQP+ EP++
Sbjct: 126 RVMVGDKVLVGSIDWVDRRGMIENVFNRSSEILDPPVANVDHLLV--LFSLEQPRPEPFT 183
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQKLV 1
L G LT+ALNK +LV+++++
Sbjct: 184 LTRFLVEAESTGIPLTLALNKMELVDKEII 213
>dbj|GAV61512.1| DUF258 domain-containing protein [Cephalotus follicularis]
Length = 474
Score = 80.1 bits (196), Expect = 6e-15
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KV+VGSID VDRR M +NVF++ S ILD PVANVDH+L FS+EQPK EPY+
Sbjct: 124 RVLVGDKVVVGSIDWVDRRGMIENVFQRHSLILDPPVANVDHLLV--LFSMEQPKLEPYT 181
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G T+ALNK++LV+Q+
Sbjct: 182 LTRFLVEAESTGIPFTLALNKSELVDQQ 209
>ref|XP_004310066.1| PREDICTED: uncharacterized protein LOC101305720 [Fragaria vesca
subsp. vesca]
Length = 479
Score = 80.1 bits (196), Expect = 6e-15
Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NV+R+ S ILD PVANVDH+L FSLEQPK +P++
Sbjct: 143 RVLVGDKVLVGSIDWVDRRGMIENVYRRSSEILDPPVANVDHLLV--LFSLEQPKLDPFA 200
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK++LV+++
Sbjct: 201 LTRFLIEAESTGIPLTLALNKSELVDEE 228
>ref|XP_017405583.1| PREDICTED: putative ribosome biogenesis GTPase RsgA [Vigna
angularis]
gb|KOM25461.1| hypothetical protein LR48_Vigan102s011900 [Vigna angularis]
dbj|BAT86609.1| hypothetical protein VIGAN_04428000 [Vigna angularis var.
angularis]
Length = 473
Score = 79.7 bits (195), Expect = 8e-15
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGS+D VDRR +NVF + S ILD PVANVDH+L FSLEQP+ EP++
Sbjct: 126 RVMVGDKVLVGSVDWVDRRGWIENVFHRSSEILDPPVANVDHLLV--LFSLEQPRPEPFT 183
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQKLV 1
L G LT+ALNKT+LV+++++
Sbjct: 184 LTRFLVEAESTGIPLTLALNKTELVDKEII 213
>ref|XP_006601901.1| PREDICTED: putative ribosome biogenesis GTPase RsgA [Glycine max]
ref|XP_014626345.1| PREDICTED: putative ribosome biogenesis GTPase RsgA [Glycine max]
gb|KRG97439.1| hypothetical protein GLYMA_18G007700 [Glycine max]
Length = 473
Score = 79.7 bits (195), Expect = 8e-15
Identities = 50/90 (55%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RV+ G KVLVGSID VDRR M +NVF + S ILD PVANVD +L FSLEQPK EP++
Sbjct: 126 RVMVGDKVLVGSIDWVDRRGMIENVFHRTSEILDPPVANVDQLLV--LFSLEQPKPEPFT 183
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQKLV 1
L G LT+ALNKT+LV+ +++
Sbjct: 184 LTRFLVEAESTGIPLTLALNKTELVDNEII 213
>ref|XP_024193443.1| small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
[Rosa chinensis]
gb|PRQ39932.1| putative nucleoside-triphosphate phosphatase [Rosa chinensis]
Length = 477
Score = 79.7 bits (195), Expect = 8e-15
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NV+R+ S ILD PVANVDH+L FSLEQPK +P++
Sbjct: 140 RVLVGDKVLVGSIDWVDRRGMIENVYRRSSEILDPPVANVDHLLV--LFSLEQPKLDPFA 197
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK++LV ++
Sbjct: 198 LTRFLVEAESTGIPLTLALNKSELVHEE 225
>ref|XP_022874765.1| small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial
[Olea europaea var. sylvestris]
Length = 486
Score = 79.7 bits (195), Expect = 8e-15
Identities = 50/93 (53%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G +VLV SID VDRR M DNVF++KS ILD PVANVDH+L FS+EQPK EP+
Sbjct: 136 RVLVGDRVLVSSIDWVDRRGMIDNVFQRKSEILDPPVANVDHLLV--LFSMEQPKLEPF- 192
Query: 87 Y*VLGVG*IDGNS----LTIALNKTKLVEQKLV 1
+L ++ S LT+ALNK +LV++ ++
Sbjct: 193 --ILTRFLVEAESTELPLTLALNKAELVDEHIL 223
>ref|XP_022560805.1| small ribosomal subunit biogenesis GTPase RsgA 1,
mitochondrial-like isoform X2 [Brassica napus]
Length = 304
Score = 78.6 bits (192), Expect = 9e-15
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF+++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 144 RVLVGDKVLVGSIDWVDRRGMIENVFQRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 201
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK +L+ ++
Sbjct: 202 LTRFLVEAESTGIPLTLALNKCELITEE 229
>gb|ESQ28565.1| hypothetical protein EUTSA_v10019531mg [Eutrema salsugineum]
Length = 431
Score = 79.3 bits (194), Expect = 1e-14
Identities = 49/88 (55%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF ++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 84 RVLVGDKVLVGSIDWVDRRGMIENVFHRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 141
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK++L+ ++
Sbjct: 142 LTRFLVEAESTGIPLTLALNKSELISEE 169
>ref|NP_176911.2| Minichromosome maintenance (MCM2/3/5) family protein [Arabidopsis
thaliana]
sp|Q4V399.1|RSGA1_ARATH RecName: Full=Small ribosomal subunit biogenesis GTPase RsgA 1,
mitochondrial; AltName: Full=Protein EMBRYO DEFECTIVE
1688; Flags: Precursor
gb|AAY56448.1| At1g67440 [Arabidopsis thaliana]
gb|AEE34646.1| Minichromosome maintenance (MCM2/3/5) family protein [Arabidopsis
thaliana]
Length = 433
Score = 79.3 bits (194), Expect = 1e-14
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF ++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 84 RVLVGDKVLVGSIDWVDRRGMIENVFHRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 141
Query: 87 Y*VLGVG*IDGNS----LTIALNKTKLVEQK 7
L ++ S LT+ALNKT+L+ ++
Sbjct: 142 ---LTRFLVEAESTRIPLTLALNKTELISEE 169
>gb|AAC18791.1| Similar to hypothetical 41.9KD protein gb|1001369 from sequence of
Synechocystis sp. gb|D64006 [Arabidopsis thaliana]
Length = 450
Score = 79.3 bits (194), Expect = 1e-14
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF ++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 84 RVLVGDKVLVGSIDWVDRRGMIENVFHRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 141
Query: 87 Y*VLGVG*IDGNS----LTIALNKTKLVEQK 7
L ++ S LT+ALNKT+L+ ++
Sbjct: 142 ---LTRFLVEAESTRIPLTLALNKTELISEE 169
>ref|XP_015076955.1| PREDICTED: putative ribosome biogenesis GTPase RsgA isoform X2
[Solanum pennellii]
Length = 487
Score = 79.3 bits (194), Expect = 1e-14
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR +NVF++K+ ILD PVANVDH+L FS++QPK EP+S
Sbjct: 137 RVLVGDKVLVGSIDWVDRRGAIENVFQRKTEILDPPVANVDHLLV--LFSMDQPKIEPFS 194
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK++LV Q+
Sbjct: 195 LTRFLVEAESTGIPLTLALNKSELVSQE 222
>ref|XP_015076954.1| PREDICTED: putative ribosome biogenesis GTPase RsgA isoform X1
[Solanum pennellii]
Length = 488
Score = 79.3 bits (194), Expect = 1e-14
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR +NVF++K+ ILD PVANVDH+L FS++QPK EP+S
Sbjct: 137 RVLVGDKVLVGSIDWVDRRGAIENVFQRKTEILDPPVANVDHLLV--LFSMDQPKIEPFS 194
Query: 87 Y-*VLGVG*IDGNSLTIALNKTKLVEQK 7
L G LT+ALNK++LV Q+
Sbjct: 195 LTRFLVEAESTGIPLTLALNKSELVSQE 222
>ref|XP_019083221.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC104701351 [Camelina sativa]
Length = 490
Score = 79.3 bits (194), Expect = 1e-14
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 4/91 (4%)
Frame = -2
Query: 267 RVLEGYKVLVGSIDSVDRRIMTDNVFRQKS*ILDLPVANVDHMLPAGAFSLEQPKSEPYS 88
RVL G KVLVGSID VDRR M +NVF ++S ILD PVANVDH+L FSL+QPK EP++
Sbjct: 146 RVLVGDKVLVGSIDWVDRRGMIENVFHRRSEILDPPVANVDHLLV--LFSLDQPKLEPFT 203
Query: 87 Y*VLGVG*IDGNS----LTIALNKTKLVEQK 7
L ++ S LT+ALNKT+L+ ++
Sbjct: 204 ---LTRFLVEAESTRIQLTLALNKTELISEE 231