BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026813
         (509 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV26181.1| hypothetical protein F511_06348 [Dorcoceras hygro...    65   6e-14
gb|KYP44960.1| Retrovirus-related Pol polyprotein from transposo...    59   2e-11
gb|KYP60838.1| Retrovirus-related Pol polyprotein from transposo...    54   4e-08
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]    53   5e-08
gb|PKU71363.1| Retrovirus-related Pol polyprotein from transposo...    54   8e-08
ref|XP_012075011.1| uncharacterized protein LOC105636362 [Jatrop...    52   8e-08
gb|PON63538.1| hypothetical protein PanWU01x14_130120, partial [...    44   1e-07
dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subt...    44   2e-07
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]    53   2e-07
gb|PKU73682.1| Retrovirus-related Pol polyprotein from transposo...    52   2e-07
ref|XP_020688303.1| uncharacterized protein LOC110103798 [Dendro...    56   3e-07
ref|XP_020691322.1| uncharacterized protein LOC110105962 [Dendro...    56   3e-07
ref|XP_009141373.1| PREDICTED: uncharacterized protein LOC103865...    50   3e-07
gb|KYP75925.1| hypothetical protein KK1_020137, partial [Cajanus...    49   3e-07
gb|PKU64658.1| Retrovirus-related Pol polyprotein from transposo...    51   4e-07
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    46   5e-07
ref|XP_016195998.1| uncharacterized protein LOC107637061 [Arachi...    49   5e-07
ref|XP_009105556.1| PREDICTED: uncharacterized protein LOC103831...    50   5e-07
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...    46   6e-07
gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposo...    52   6e-07

>gb|KZV26181.1| hypothetical protein F511_06348 [Dorcoceras hygrometricum]
          Length = 706

 Score = 64.7 bits (156), Expect(2) = 6e-14
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIAST--DQGSE 182
           CQICG   H A+ CY RF+ +FVPK  G  ++     F++ S     +  AST  +  SE
Sbjct: 211 CQICGIPGHVAEICYYRFDKEFVPKSSGV-SRTSQQQFNRSSPSYPPSAFASTKSESASE 269

Query: 183 MSWFPDSGASHH 218
             W+PDSGASHH
Sbjct: 270 EWWYPDSGASHH 281



 Score = 40.0 bits (92), Expect(2) = 6e-14
 Identities = 16/31 (51%), Positives = 25/31 (80%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGSTN 328
           NL+++S+YTG  K+QVGNG  L I+++G +N
Sbjct: 288 NLSVSSEYTGGSKVQVGNGAGLSISNIGESN 318


>gb|KYP44960.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 517

 Score = 59.3 bits (142), Expect(2) = 2e-11
 Identities = 30/70 (42%), Positives = 40/70 (57%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQICG   H A  C++RFN DF  +G  + N+  Y  FSQ  +    A +A+     +  
Sbjct: 293 CQICGKHGHLAIDCWQRFNQDF--QGPPQANQTQYQGFSQSDQ----AFMATPTTVLDPL 346

Query: 189 WFPDSGASHH 218
           W+PDSGASHH
Sbjct: 347 WYPDSGASHH 356



 Score = 37.0 bits (84), Expect(2) = 2e-11
 Identities = 13/31 (41%), Positives = 25/31 (80%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGST 325
           +NL++ +DYTG+ ++++GNG  L I H+G++
Sbjct: 362 SNLSVKTDYTGNDRVKIGNGSGLSIKHIGNS 392


>gb|KYP60838.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 324

 Score = 53.5 bits (127), Expect(2) = 4e-08
 Identities = 24/70 (34%), Positives = 38/70 (54%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQICG   H A  C+ R+N ++  +     ++ Y+HN    +    + M+A+     +  
Sbjct: 28  CQICGKNGHIALDCWNRYNQEYQTQPQAHASQMYHHN----NASGDATMLATPSIVVDPL 83

Query: 189 WFPDSGASHH 218
           W+PDSGASHH
Sbjct: 84  WYPDSGASHH 93



 Score = 31.6 bits (70), Expect(2) = 4e-08
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVG 319
           + L+  + YTG  K+ +GNG  L+I HVG
Sbjct: 99  STLSTKNTYTGSDKVNIGNGTGLNIHHVG 127


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score = 53.1 bits (126), Expect(2) = 5e-08
 Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIAS-TDQGSEM 185
           CQ+CG   HTA  CY RF+       F  G     H+ +  ++    AM+AS ++  ++ 
Sbjct: 289 CQLCGKFGHTAQICYHRFD-----ISFQGGQTTISHSLNNGNQNNIPAMVASASNNPADE 343

Query: 186 SWFPDSGASHH 218
           SW+ DSGASHH
Sbjct: 344 SWYLDSGASHH 354



 Score = 31.6 bits (70), Expect(2) = 5e-08
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           NL   S YTG  K+ +GNG  L I+++GS
Sbjct: 361 NLTSTSPYTGTDKVTIGNGKHLSISNIGS 389


>gb|PKU71363.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 1351

 Score = 53.9 bits (128), Expect(2) = 8e-08
 Identities = 27/72 (37%), Positives = 37/72 (51%)
 Frame = +3

Query: 3   IHCQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSE 182
           I CQIC    H AD C+ R NP++VP              +Q S    SA++A++D  + 
Sbjct: 267 ITCQICKKRGHQADACWHRLNPNYVP--------------TQTSSKNQSALLANSDNNNV 312

Query: 183 MSWFPDSGASHH 218
             W+ DSGAS H
Sbjct: 313 SDWYIDSGASSH 324



 Score = 30.0 bits (66), Expect(2) = 8e-08
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 230 FNNLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           F+NL  A +Y G   + +G+G S+ IAH G+
Sbjct: 329 FDNLANAHEYLGQDSVTIGDGRSIQIAHSGT 359


>ref|XP_012075011.1| uncharacterized protein LOC105636362 [Jatropha curcas]
          Length = 331

 Score = 52.0 bits (123), Expect(2) = 8e-08
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYH-NFSQKSEGQTSAMIASTDQGSEM 185
           CQICGY NHTA  C +R+      +    GN NY + N S  +     A + S+   +++
Sbjct: 223 CQICGYRNHTAITCRRRYQ-----RNQNTGNYNYGNVNASNTTPTANVAAVQSSASPAQV 277

Query: 186 SWFPDSGASHH 218
           +WFPD+ A++H
Sbjct: 278 TWFPDTTANYH 288



 Score = 32.0 bits (71), Expect(2) = 8e-08
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGST 325
           N+L   ++YTG  +L VGNG  L I+H G++
Sbjct: 294 NHLTQINEYTGPDQLFVGNGQGLSISHTGNS 324


>gb|PON63538.1| hypothetical protein PanWU01x14_130120, partial [Parasponia
           andersonii]
          Length = 268

 Score = 43.9 bits (102), Expect(2) = 1e-07
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQ+CG   H A +CY  F+P+         + +  H          +A +AS    ++ S
Sbjct: 80  CQLCGRVGHLASRCYSSFDPNV------SLDSSSAHTSQLSGSTSHAAFVASPTTVNDPS 133

Query: 189 WFPDSGASHH 218
           W+ DSGA+ H
Sbjct: 134 WYIDSGATDH 143



 Score = 39.3 bits (90), Expect(2) = 1e-07
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           NL + SDY G  K+ VGNG++L I+H+GS
Sbjct: 150 NLTILSDYKGKEKVTVGNGITLPISHIGS 178


>dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subterraneum]
          Length = 1387

 Score = 43.9 bits (102), Expect(3) = 2e-07
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFG-EGNKNYYHNFSQKSEGQTSAMIASTDQGSEM 185
           CQ+C  T H A  C  RF+  +  + +  E +K          +G  SA IAS   G + 
Sbjct: 261 CQVCNGTGHIAVDCSYRFDRPYTGRNYSTEADK----------QGSHSAFIASPYHGQDY 310

Query: 186 SWFPDSGASHH 218
            W+ DSGA++H
Sbjct: 311 EWYFDSGANNH 321



 Score = 31.2 bits (69), Expect(3) = 2e-07
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +3

Query: 318 DQLTGEILLKGDLRNGLYQ 374
           D+LTG+ LLKG L++GLYQ
Sbjct: 402 DKLTGQTLLKGRLKDGLYQ 420



 Score = 26.9 bits (58), Expect(3) = 2e-07
 Identities = 17/46 (36%), Positives = 19/46 (41%)
 Frame = +2

Query: 200 FRGFSPHN**FNNLNLASDYTGHYKLQVGNGVSLDIAHVGSTNRGN 337
           F+GF+ HN             G   L VGNG  L I   GST   N
Sbjct: 329 FQGFNEHN-------------GKNSLMVGNGEKLKIVASGSTKLNN 361


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score = 52.8 bits (125), Expect(2) = 2e-07
 Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDF-VPKGFGEGNKN--YYHNFSQKSEGQTSAMIASTDQGS 179
           CQ+CG   H   +CY RF+  F VP+     N +   Y++FS     Q + +I +++  S
Sbjct: 310 CQLCGKIGHVVAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSP----QVNGVIPTSEVFS 365

Query: 180 EMSWFPDSGASHH 218
           + +W+PDSGAS+H
Sbjct: 366 DDNWYPDSGASNH 378



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGST 325
           NL  ++++ G  ++ VGNG  L I H+G +
Sbjct: 385 NLMKSAEFAGQNQVHVGNGTGLSIKHIGQS 414


>gb|PKU73682.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 1211

 Score = 52.4 bits (124), Expect(2) = 2e-07
 Identities = 24/70 (34%), Positives = 36/70 (51%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQIC    H+A+ C+   NP+++P              SQ S   + A++A+TD  +   
Sbjct: 123 CQICKKNGHSAEACWHHLNPNYIP--------------SQPSNKNSQALLANTDTNNSTD 168

Query: 189 WFPDSGASHH 218
           W+ DSGAS H
Sbjct: 169 WYLDSGASTH 178



 Score = 30.0 bits (66), Expect(2) = 2e-07
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           NNL  ++ YTG  K+ +G+G S+ IAH G+
Sbjct: 184 NNLATSNVYTGTDKVTLGDGRSVPIAHSGT 213


>ref|XP_020688303.1| uncharacterized protein LOC110103798 [Dendrobium catenatum]
          Length = 742

 Score = 55.8 bits (133), Expect(2) = 3e-07
 Identities = 28/70 (40%), Positives = 37/70 (52%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQIC    H AD C+ R NP++VP              +Q+S  Q SA++A+TD  S   
Sbjct: 271 CQICKKKGHQADACWHRLNPNYVP--------------NQQSAKQASALLANTDGASATD 316

Query: 189 WFPDSGASHH 218
           W+ D GAS H
Sbjct: 317 WYIDLGASSH 326



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           NL+   +Y G   + +G+G S+ IAH G+
Sbjct: 333 NLDNVYEYNGSDTVTIGDGRSVPIAHAGT 361


>ref|XP_020691322.1| uncharacterized protein LOC110105962 [Dendrobium catenatum]
          Length = 443

 Score = 55.8 bits (133), Expect(2) = 3e-07
 Identities = 29/72 (40%), Positives = 41/72 (56%)
 Frame = +3

Query: 3   IHCQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSE 182
           + CQIC    H+AD C+ R NP+++P+     NKN          GQ  A+IA+TD  + 
Sbjct: 275 VTCQICKKKGHSADACWHRLNPNYIPQ--SNSNKN----------GQ--ALIANTDTNNS 320

Query: 183 MSWFPDSGASHH 218
           + W+ DSGAS H
Sbjct: 321 VDWYLDSGASTH 332



 Score = 26.2 bits (56), Expect(2) = 3e-07
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           NL  ++ Y G  K+ +G+G S+ IAH G+
Sbjct: 339 NLATSNAYNGTDKVTLGDGRSVPIAHSGT 367


>ref|XP_009141373.1| PREDICTED: uncharacterized protein LOC103865327 [Brassica rapa]
          Length = 383

 Score = 50.4 bits (119), Expect(2) = 3e-07
 Identities = 28/70 (40%), Positives = 33/70 (47%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQICG   HTA KCY RF+                HNF  +   Q  + +  +D  S   
Sbjct: 280 CQICGRVGHTAIKCYNRFD----------------HNFQGQQLNQAFSSLRISD-NSGKE 322

Query: 189 WFPDSGASHH 218
           WFPDSGAS H
Sbjct: 323 WFPDSGASTH 332



 Score = 31.6 bits (70), Expect(2) = 3e-07
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGSTNRGNTSQGG 352
           N L  ++ Y G+  + V +G  L I HVGST   ++S+ G
Sbjct: 338 NMLQTSTPYEGNDTVLVADGTFLPITHVGSTTISSSSESG 377


>gb|KYP75925.1| hypothetical protein KK1_020137, partial [Cajanus cajan]
          Length = 132

 Score = 48.5 bits (114), Expect(2) = 3e-07
 Identities = 22/70 (31%), Positives = 37/70 (52%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQIC    H A  C+ ++N ++  +     ++ Y+HN +       + M+A+     +  
Sbjct: 1   CQICEKNGHIALDCWNKYNQEYQTQPQVHTSQMYHHNNALGD----ATMLATPSAAMDPL 56

Query: 189 WFPDSGASHH 218
           W+PDSGASHH
Sbjct: 57  WYPDSGASHH 66



 Score = 33.5 bits (75), Expect(2) = 3e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVG 319
           + L+  + YTG  K+ +GNG  LDI HVG
Sbjct: 72  STLSTKNPYTGSDKVNIGNGTGLDIHHVG 100


>gb|PKU64658.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 1350

 Score = 51.2 bits (121), Expect(2) = 4e-07
 Identities = 25/72 (34%), Positives = 35/72 (48%)
 Frame = +3

Query: 3   IHCQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSE 182
           I CQIC    H AD C+ R NP+++P              +Q S    SA++ + D  + 
Sbjct: 266 ITCQICKKKGHQADACWHRLNPNYIP--------------NQPSSKNQSALLTNYDTNNS 311

Query: 183 MSWFPDSGASHH 218
             W+ DSGAS H
Sbjct: 312 TDWYIDSGASSH 323



 Score = 30.4 bits (67), Expect(2) = 4e-07
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 230 FNNLNLASDYTGHYKLQVGNGVSLDIAHVGS 322
           F NL  AS+Y G   + +G+G S+ IAH G+
Sbjct: 328 FENLATASNYLGQDSVTIGDGRSILIAHSGT 358


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 45.8 bits (107), Expect(2) = 5e-07
 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 24/94 (25%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDF---------VPKGFGEGNKN---------------YYH 116
           CQ+C    HT  +C+ R++P+F          P   G G +N                Y 
Sbjct: 183 CQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGNVNLTEYD 242

Query: 117 NFSQKSEGQTSAMIASTDQGSEMSWFPDSGASHH 218
               +   +  AM+A+ +      WFPDSGA++H
Sbjct: 243 AQENQDYSEMEAMVATPEDLQNCCWFPDSGATNH 276



 Score = 35.4 bits (80), Expect(2) = 5e-07
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 236 NLNLASDYTGHYKLQVGNGVSLDIAHVG 319
           NLN  ++Y G+ K+ +GNG  L I+H+G
Sbjct: 283 NLNSGAEYNGNSKIHMGNGTGLKISHIG 310


>ref|XP_016195998.1| uncharacterized protein LOC107637061 [Arachis ipaensis]
          Length = 1042

 Score = 49.3 bits (116), Expect(2) = 5e-07
 Identities = 31/87 (35%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRF-----NPDFVPKGFG-------EGNKNYYHNFSQKSEGQTS- 149
           CQ+CG   H A KCY RF     NP   P              K   H+  Q S  Q + 
Sbjct: 231 CQVCGKIGHIALKCYHRFDQSYTNPQLQPLNAAPPPSMAFHNGKQVQHHTPQSSPQQPAA 290

Query: 150 ----AMIASTDQGSEMSWFPDSGASHH 218
               A IA      +  W+PDSGASHH
Sbjct: 291 PSPQAYIALPSAVPDAGWYPDSGASHH 317



 Score = 32.0 bits (71), Expect(2) = 5e-07
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGST 325
           +NLN  S+Y G  ++  GNG  + I HVG++
Sbjct: 323 SNLNTGSEYDGSQQVYGGNGQGMKITHVGNS 353


>ref|XP_009105556.1| PREDICTED: uncharacterized protein LOC103831414 [Brassica rapa]
          Length = 392

 Score = 49.7 bits (117), Expect(2) = 5e-07
 Identities = 28/70 (40%), Positives = 37/70 (52%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIASTDQGSEMS 188
           CQICG   H A KCYKRF+ +FV         N+    +  ++        ST  G+E  
Sbjct: 281 CQICGKYGHPAYKCYKRFDVNFVVSD-PPPQANFLTTVAANNQ--------STPSGAE-- 329

Query: 189 WFPDSGASHH 218
           W+PDSG+SHH
Sbjct: 330 WYPDSGSSHH 339



 Score = 31.6 bits (70), Expect(2) = 5e-07
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGS----TNRGNTSQGGS 355
           ++L+ A  Y G  ++ VGNG  L I HVGS    T  G ++Q  S
Sbjct: 345 DHLDTAQPYAGMDQVMVGNGEFLPITHVGSASIPTQSGQSNQQNS 389


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 1403

 Score = 45.8 bits (107), Expect(2) = 6e-07
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFVPKGFGEGNKNYYHNFSQKSEGQTSAMIA-STDQGSEM 185
           CQ+CG   H A  C+ R++  +        N N Y+  +Q+   Q  AMIA S +   + 
Sbjct: 273 CQVCGKIGHIAFHCWHRYDQQYTEPNLNH-NTNVYNPGNQQ---QMQAMIAGSQNMVYDD 328

Query: 186 SWFPDSGASHH 218
            W+PDSGA++H
Sbjct: 329 QWYPDSGATNH 339



 Score = 35.0 bits (79), Expect(2) = 6e-07
 Identities = 14/31 (45%), Positives = 21/31 (67%)
 Frame = +2

Query: 233 NNLNLASDYTGHYKLQVGNGVSLDIAHVGST 325
           NNL   +DYTG  K+ +GNG ++ I H G++
Sbjct: 345 NNLGSKTDYTGQDKIHMGNGQAIGINHTGTS 375


>gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 696

 Score = 52.0 bits (123), Expect(2) = 6e-07
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 10/80 (12%)
 Frame = +3

Query: 9   CQICGYTNHTADKCYKRFNPDFV----------PKGFGEGNKNYYHNFSQKSEGQTSAMI 158
           CQIC    H A +CYKRF+  F+          P G    N+      + ++    SA+I
Sbjct: 255 CQICLIPGHYAHECYKRFDRHFIGGLTSMNYNGPLGTSAPNRLQSSYNTTQAGAYHSALI 314

Query: 159 ASTDQGSEMSWFPDSGASHH 218
           +     +E +W+PDSGASHH
Sbjct: 315 SPPHTMTESAWYPDSGASHH 334



 Score = 28.9 bits (63), Expect(2) = 6e-07
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +2

Query: 230 FNNLNLASDYTGHYKLQVGNGVSLDIAHVGSTNRGNTS 343
           +N LN  + Y G   +Q+GN   L I ++G+T+  ++S
Sbjct: 339 YNILNNPTPYVGTDTVQIGNDTGLHITNLGNTHLHSSS 376