BLASTX nr result

ID: Rehmannia32_contig00026540 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026540
         (478 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011071435.1| condensin-2 complex subunit H2 isoform X2 [S...    76   4e-13
ref|XP_011071434.1| condensin-2 complex subunit H2 isoform X1 [S...    76   4e-13
gb|PIN12049.1| hypothetical protein CDL12_15338 [Handroanthus im...    76   6e-13
ref|XP_012840730.1| PREDICTED: condensin-2 complex subunit H2 [E...    69   1e-10
ref|XP_016516063.1| PREDICTED: condensin-2 complex subunit H2-li...    56   4e-06
ref|XP_009596735.1| PREDICTED: condensin-2 complex subunit H2-li...    56   5e-06
ref|XP_009791888.1| PREDICTED: condensin-2 complex subunit H2-li...    55   7e-06

>ref|XP_011071435.1| condensin-2 complex subunit H2 isoform X2 [Sesamum indicum]
          Length = 640

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 40/61 (65%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -1

Query: 457 KNGK--GKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRIVAPLDMHFV 284
           K GK  GKEN              +RFS+ LGK SRSRCTPEGKKRRKSRIVAPLDMHFV
Sbjct: 580 KRGKINGKENRPAANSSPQGSSSSYRFSVTLGKQSRSRCTPEGKKRRKSRIVAPLDMHFV 639

Query: 283 G 281
           G
Sbjct: 640 G 640


>ref|XP_011071434.1| condensin-2 complex subunit H2 isoform X1 [Sesamum indicum]
          Length = 656

 Score = 76.3 bits (186), Expect = 4e-13
 Identities = 40/61 (65%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
 Frame = -1

Query: 457 KNGK--GKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRIVAPLDMHFV 284
           K GK  GKEN              +RFS+ LGK SRSRCTPEGKKRRKSRIVAPLDMHFV
Sbjct: 596 KRGKINGKENRPAANSSPQGSSSSYRFSVTLGKQSRSRCTPEGKKRRKSRIVAPLDMHFV 655

Query: 283 G 281
           G
Sbjct: 656 G 656


>gb|PIN12049.1| hypothetical protein CDL12_15338 [Handroanthus impetiginosus]
          Length = 671

 Score = 75.9 bits (185), Expect = 6e-13
 Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
 Frame = -1

Query: 478 KSPIVK----VKNGKGKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRI 311
           KSP+ K     KN KGKEN               RFS NLGKP+++RCTPEGKKRRKS+I
Sbjct: 602 KSPLAKRYAKSKNSKGKENSSAVSSSPQRSTSSCRFSFNLGKPNKARCTPEGKKRRKSQI 661

Query: 310 VAPLDMHFV 284
           +APLD HFV
Sbjct: 662 LAPLDTHFV 670


>ref|XP_012840730.1| PREDICTED: condensin-2 complex subunit H2 [Erythranthe guttata]
          Length = 673

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 31/36 (86%), Positives = 34/36 (94%)
 Frame = -1

Query: 388 RFSINLGKPSRSRCTPEGKKRRKSRIVAPLDMHFVG 281
           RFSINLGKP  +RCTPEGKKRRK++IVAPLDMHFVG
Sbjct: 637 RFSINLGKPGLTRCTPEGKKRRKAQIVAPLDMHFVG 672


>ref|XP_016516063.1| PREDICTED: condensin-2 complex subunit H2-like [Nicotiana tabacum]
          Length = 316

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = -1

Query: 478 KSPI----VKVKNGKGKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRI 311
           KSPI     + +  KGKE              G+RF++ LGK + +RCTPEGKKRRKSR+
Sbjct: 247 KSPIPNQGFRKEKNKGKEVQAAFSSSPSEPNSGYRFALKLGKVNGTRCTPEGKKRRKSRL 306

Query: 310 VAPLDMH 290
           V P D+H
Sbjct: 307 VVPPDIH 313


>ref|XP_009596735.1| PREDICTED: condensin-2 complex subunit H2-like [Nicotiana
           tomentosiformis]
          Length = 686

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
 Frame = -1

Query: 478 KSPI----VKVKNGKGKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRI 311
           KSPI     + +  KGKE              G+RF++ LGK + +RCTPEGKKRRKSR+
Sbjct: 617 KSPIPNQGFRKEKNKGKEVQAAFSSSPSEPNSGYRFALKLGKVNGTRCTPEGKKRRKSRL 676

Query: 310 VAPLDMH 290
           V P D+H
Sbjct: 677 VVPPDIH 683


>ref|XP_009791888.1| PREDICTED: condensin-2 complex subunit H2-like [Nicotiana
           sylvestris]
 ref|XP_016498465.1| PREDICTED: condensin-2 complex subunit H2-like [Nicotiana tabacum]
          Length = 675

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 26/59 (44%), Positives = 35/59 (59%)
 Frame = -1

Query: 466 VKVKNGKGKENCXXXXXXXXXXXXGFRFSINLGKPSRSRCTPEGKKRRKSRIVAPLDMH 290
           ++ +  KGKEN               RF++  GK S +RCTPE KKRRKSRIV P+++H
Sbjct: 614 IRKRKNKGKENQAPFGSSPSAPNSSCRFALKFGKVSGTRCTPESKKRRKSRIVEPVELH 672


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