BLASTX nr result

ID: Rehmannia32_contig00026479 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026479
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011078402.1| axial regulator YABBY 5 [Sesamum indicum]          60   3e-08
gb|KZV18878.1| hypothetical protein F511_31717 [Dorcoceras hygro...    56   5e-07
gb|PIN02618.1| hypothetical protein CDL12_24869 [Handroanthus im...    56   1e-06
ref|XP_024179882.1| axial regulator YABBY 5 [Rosa chinensis] >gi...    54   4e-06
gb|PNX73105.1| axial regulator yabby 5-like protein, partial [Tr...    52   5e-06

>ref|XP_011078402.1| axial regulator YABBY 5 [Sesamum indicum]
          Length = 183

 Score = 59.7 bits (143), Expect = 3e-08
 Identities = 25/29 (86%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   VRCGHCTNLWTVNMAAAFQCLQPSCQDVQ 87
           VRCGHC+N+W VNMAAAFQCLQPS QDVQ
Sbjct: 34  VRCGHCSNVWGVNMAAAFQCLQPSWQDVQ 62


>gb|KZV18878.1| hypothetical protein F511_31717 [Dorcoceras hygrometricum]
          Length = 147

 Score = 55.8 bits (133), Expect = 5e-07
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +1

Query: 1  VRCGHCTNLWTVNMAAAFQCLQPSCQ 78
          VRCGHCTNLWTVNMAAAFQCLQ + Q
Sbjct: 21 VRCGHCTNLWTVNMAAAFQCLQQNAQ 46


>gb|PIN02618.1| hypothetical protein CDL12_24869 [Handroanthus impetiginosus]
          Length = 191

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 25/31 (80%), Positives = 27/31 (87%), Gaps = 2/31 (6%)
 Frame = +1

Query: 1   VRCGHCTNLWTVNMAAAFQC--LQPSCQDVQ 87
           VRCGHC+NLWTVNMAAAFQC  +QPS QD Q
Sbjct: 34  VRCGHCSNLWTVNMAAAFQCVQVQPSWQDAQ 64


>ref|XP_024179882.1| axial regulator YABBY 5 [Rosa chinensis]
 gb|PRQ46355.1| putative transcription factor C2C2-YABBY family [Rosa chinensis]
          Length = 186

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +1

Query: 1   VRCGHCTNLWTVNMAAAFQCLQPSCQDVQ 87
           VRCGHCTNLW+VNMAAAFQ L  SCQDVQ
Sbjct: 39  VRCGHCTNLWSVNMAAAFQSL--SCQDVQ 65


>gb|PNX73105.1| axial regulator yabby 5-like protein, partial [Trifolium pratense]
          Length = 78

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = +1

Query: 1   VRCGHCTNLWTVNMAAAFQCLQPSCQDVQV 90
           VRCGHCTNLW+VNMAAAFQ L  S QDVQV
Sbjct: 44  VRCGHCTNLWSVNMAAAFQSL--SWQDVQV 71


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