BLASTX nr result

ID: Rehmannia32_contig00026421 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026421
         (602 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN23232.1| Ubiquitinyl hydrolase 1 [Handroanthus impetiginosus]   172   2e-47
gb|PIN10681.1| Ubiquitin-specific protease [Handroanthus impetig...   172   2e-46
ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Se...   160   5e-42
gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanth...   152   3e-39

>gb|PIN23232.1| Ubiquitinyl hydrolase 1 [Handroanthus impetiginosus]
          Length = 578

 Score =  172 bits (437), Expect = 2e-47
 Identities = 114/239 (47%), Positives = 137/239 (57%), Gaps = 41/239 (17%)
 Frame = +1

Query: 1   RKSSLNPISSEGSFGRASYTETTEQCSSRYNVQQPSFHNASS-DVISPPLTSQTSATTSG 177
           R+SS  PI++EGS GR  Y ETTEQCS  YNVQQPS   ASS D  SPPLT+  S TTSG
Sbjct: 121 RRSSPKPIANEGSSGRVLYAETTEQCSYEYNVQQPSADIASSLDAFSPPLTTVVSPTTSG 180

Query: 178 MPLSMSGKSIINRRS------------------------SEEVSGMGITH-----SSEDA 270
           + LS SG  + N+RS                        SEE+SG+G TH     SSE+A
Sbjct: 181 VTLSKSGNFVTNQRSAETSTLPEGSRDSSGRADGAVLRSSEELSGIGFTHPTFSQSSEEA 240

Query: 271 YLGKDDFIPSKHHANISHGFKIGDGDLRGSL-----------NAFDSGKKYEILNSSTTA 417
            L K DF      ANI    + GDGD RG+L           NAFD       LNSSTTA
Sbjct: 241 NLRKGDFA-----ANIPSISENGDGDPRGTLHERGTVEREHLNAFDGRISNGTLNSSTTA 295

Query: 418 IVGTNADDSRMNLTKGEYLSPKRISCSDETKGLNCSSERSSIKKSNKSRTISQPNELDE 594
             GTNAD+++M+L KGEY S K+I C+DETKG NCSSE    K+ NKSR  S  + +++
Sbjct: 296 GRGTNADETQMDLMKGEYSSQKKIPCNDETKGSNCSSEGIPTKRINKSRHSSHSHGVEQ 354


>gb|PIN10681.1| Ubiquitin-specific protease [Handroanthus impetiginosus]
          Length = 754

 Score =  172 bits (436), Expect = 2e-46
 Identities = 113/239 (47%), Positives = 140/239 (58%), Gaps = 41/239 (17%)
 Frame = +1

Query: 1   RKSSLNPISSEGSFGRASYTETTEQCSSRYNVQQPSFHNASS-DVISPPLTSQTSATTSG 177
           R+SS  PI++EGS GR  Y ETTEQCS  YN QQPS   ASS D  SP LT+  S TTSG
Sbjct: 121 RRSSPKPIANEGSSGRVLYAETTEQCSYEYNDQQPSADIASSLDAFSPTLTTVVSPTTSG 180

Query: 178 MPLSMSGKSIINRRS------------------------SEEVSGMGITH-----SSEDA 270
           + LS SG  + N+RS                        SEE+SG+G TH     S E+A
Sbjct: 181 VTLSKSGNFVTNQRSAETSTLPKGNRDSSGRADGAVLRSSEELSGIGFTHPTFSQSLEEA 240

Query: 271 YLGKDDFIPSKHHANISHGFKIGDGDLRGSL-----------NAFDSGKKYEILNSSTTA 417
            L K DF      ANI    + GDGD RG+L           NAFD       LNSSTTA
Sbjct: 241 DLRKGDFA-----ANIPSISENGDGDPRGTLHESGTVEREHLNAFDGRISNRTLNSSTTA 295

Query: 418 IVGTNADDSRMNLTKGEYLSPKRISCSDETKGLNCSSERSSIKKSNKSRTISQPNELDE 594
             GTNAD+++++L KGEY S K+I C+DETKG NCSSER+S+K+SNKSR  S+ + +++
Sbjct: 296 GRGTNADETQVDLIKGEYSSQKKIPCNDETKGSNCSSERTSMKRSNKSRHNSRSHGVEQ 354


>ref|XP_011077821.1| ubiquitin carboxyl-terminal hydrolase 15 [Sesamum indicum]
          Length = 979

 Score =  160 bits (406), Expect = 5e-42
 Identities = 106/243 (43%), Positives = 137/243 (56%), Gaps = 43/243 (17%)
 Frame = +1

Query: 1   RKSSLNPISSEGSFGRASYT--ETTEQCSSRYNVQQPSFHNAS-SDVISPPLTSQTSATT 171
           ++S L PI SEGS+   S +  +T EQCSS+YN+ QPS   AS  DV+SPP T+ TSAT 
Sbjct: 121 QRSCLKPIPSEGSYQGTSLSCDKTMEQCSSQYNMWQPSVDKASLEDVVSPPSTTLTSATA 180

Query: 172 SGMPLSMSGKSIINRRSSE------------------------EVSGMGITH-----SSE 264
           S +  S +GKS+INRRS+E                        EVSG   TH     S E
Sbjct: 181 SSVMPSTAGKSVINRRSTEICSLLKGNRDSSRKADRAALKSPKEVSGFCFTHPPLVQSPE 240

Query: 265 DAYLGKDDFIPSKHHANISHGFKIGDGDLRG-----------SLNAFDSGKKYEILNSST 411
           DAYL + D + S+HHAN+    +   G LR            SLN   SG  Y ILNSST
Sbjct: 241 DAYLREGDCVLSEHHANVLPAAEKAYGGLRSTLLESGTTESESLNVIGSGNNYGILNSST 300

Query: 412 TAIVGTNADDSRMNLTKGEYLSPKRISCSDETKGLNCSSERSSIKKSNKSRTISQPNELD 591
            A   TNA D++M+L  G+YL  KRI C DE KG N SS+++S+K+SNKSR IS  + ++
Sbjct: 301 AARSDTNAYDTQMDLRNGDYLYQKRIPCCDEMKGFN-SSQKTSVKRSNKSRIISNSHGIE 359

Query: 592 ERR 600
             +
Sbjct: 360 PHK 362


>gb|PIN23230.1| Ubiquitin carboxyl-terminal hydrolase [Handroanthus impetiginosus]
          Length = 882

 Score =  152 bits (385), Expect = 3e-39
 Identities = 102/227 (44%), Positives = 126/227 (55%), Gaps = 30/227 (13%)
 Frame = +1

Query: 4   KSSLNPISSEGSFGRASYTETTEQCSSRYNVQQPSFHNASS-DVISPPLTSQTSATTSGM 180
           +SS  PI++EGS  R  Y ETTEQCS  YNVQQPS   ASS D  SPPLT+  S TTSG+
Sbjct: 122 RSSPKPIANEGSSRRVLYAETTEQCSYEYNVQQPSADIASSLDAFSPPLTTVVSPTTSGV 181

Query: 181 PLSMSGKSIINRRS------------------------SEEVSGMGITH-----SSEDAY 273
            LS SG  + N+RS                        SEE+SG+G TH     S E+A 
Sbjct: 182 TLSKSGNFVTNQRSAETSTLPKGNRDSSGRADRAVLRSSEELSGIGFTHPTFSQSLEEAD 241

Query: 274 LGKDDFIPSKHHANISHGFKIGDGDLRGSLNAFDSGKKYEILNSSTTAIVGTNADDSRMN 453
           L K DF      ANI    + GDGD RG                      GTNAD+++M+
Sbjct: 242 LRKGDFT-----ANIPSISENGDGDPRGR---------------------GTNADETQMD 275

Query: 454 LTKGEYLSPKRISCSDETKGLNCSSERSSIKKSNKSRTISQPNELDE 594
           L KGEY S K+I C+DETKG NCSSER+S K+SNKSR  S+ + +++
Sbjct: 276 LIKGEYSSQKKIPCNDETKGSNCSSERTSTKRSNKSRHNSRSHGVEQ 322


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