BLASTX nr result

ID: Rehmannia32_contig00026412 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026412
         (529 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008352570.1| PREDICTED: uncharacterized protein LOC103416...    58   9e-07

>ref|XP_008352570.1| PREDICTED: uncharacterized protein LOC103416078 [Malus domestica]
          Length = 251

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
 Frame = -2

Query: 504 VLWAREIVLNSPEHVITFFLTLCCSIWYGWNLKCFEDQTFSPQSLVISAKQTLLTFQSTK 325
           +LW  EIV   P+     F+ +C ++W   N K +ED+  SP+   + A Q  L F    
Sbjct: 41  LLWLNEIVDLIPKASFDVFMMICWALWGARNKKLWEDKLVSPEICTVGAIQWWLEFTRLT 100

Query: 324 VWPERPSKSLNSANLVEAPPPG-IHIFFDGAISTQNQQAGLGIFILGENGTFIKGVSKSF 148
           +        L S    + PP G + +  DG+ + +   AG G  I   +G F+     SF
Sbjct: 101 IPGAEQDSKLRSTPRWKVPPQGRLKLNVDGSWNAEKLVAGFGAIIRDGDGLFVAASIGSF 160

Query: 147 PGITNP 130
             I +P
Sbjct: 161 EDIASP 166


Top