BLASTX nr result

ID: Rehmannia32_contig00026347 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026347
         (431 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN12081.1| Transcription factor CA150 [Handroanthus impetigi...    86   8e-17
ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [...    83   1e-15

>gb|PIN12081.1| Transcription factor CA150 [Handroanthus impetiginosus]
          Length = 1001

 Score = 86.3 bits (212), Expect = 8e-17
 Identities = 43/63 (68%), Positives = 51/63 (80%), Gaps = 4/63 (6%)
 Frame = -3

Query: 177 GNYSFIGNVQPNQTDQSHRSNVRADGSQEMGAMTSAPAFMQSAP----QPARPDSSPSAT 10
           GNYSF GN++P QTDQS R++VRADG Q MGA+TSA +F QSAP    QP +P+SSPSAT
Sbjct: 119 GNYSFNGNMEPKQTDQSQRTHVRADGFQGMGAITSASSFTQSAPRPASQPGQPNSSPSAT 178

Query: 9   HFA 1
           HFA
Sbjct: 179 HFA 181


>ref|XP_012842923.1| PREDICTED: pre-mRNA-processing protein 40C [Erythranthe guttata]
 gb|EYU32634.1| hypothetical protein MIMGU_mgv1a001237mg [Erythranthe guttata]
          Length = 858

 Score = 83.2 bits (204), Expect = 1e-15
 Identities = 41/59 (69%), Positives = 49/59 (83%), Gaps = 1/59 (1%)
 Frame = -3

Query: 174 NYSFIGNVQPNQTDQSHRSNVRADGSQEMGAMTSAPAFMQ-SAPQPARPDSSPSATHFA 1
           N+SF GNVQ  Q DQ +R+NVR DG+QE GA+TS+PAFMQ S+ QPARP+SSPS THFA
Sbjct: 25  NFSFNGNVQSAQADQPNRTNVRGDGTQETGAITSSPAFMQSSSSQPARPNSSPSTTHFA 83


Top