BLASTX nr result
ID: Rehmannia32_contig00026123
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00026123
(497 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN05615.1| DNA-directed RNA polymerase [Handroanthus impetig... 211 2e-60
gb|AAY89361.1| RNA polymerase IV largest subunit, partial [Antir... 195 1e-54
ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV su... 190 9e-53
ref|XP_022873259.1| DNA-directed RNA polymerase IV subunit 1 iso... 169 1e-45
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 169 1e-45
ref|XP_022873258.1| DNA-directed RNA polymerase IV subunit 1 iso... 169 1e-45
ref|XP_022873257.1| DNA-directed RNA polymerase IV subunit 1 iso... 169 1e-45
ref|XP_022873254.1| DNA-directed RNA polymerase IV subunit 1 iso... 169 1e-45
gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythra... 166 1e-44
gb|KZV42123.1| DNA-directed RNA polymerase IV subunit 1-like [Do... 157 2e-41
ref|XP_019156687.1| PREDICTED: DNA-directed RNA polymerase IV su... 153 7e-40
ref|XP_019156683.1| PREDICTED: DNA-directed RNA polymerase IV su... 153 7e-40
dbj|GAV79426.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol... 144 7e-37
ref|XP_018820498.1| PREDICTED: DNA-directed RNA polymerase IV su... 142 3e-36
ref|XP_018820497.1| PREDICTED: DNA-directed RNA polymerase IV su... 142 3e-36
gb|AAY89360.1| RNA polymerase IV largest subunit, partial [Solan... 142 4e-36
ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV su... 142 4e-36
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV su... 142 4e-36
ref|XP_015085574.1| PREDICTED: DNA-directed RNA polymerase IV su... 142 6e-36
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 141 1e-35
>gb|PIN05615.1| DNA-directed RNA polymerase [Handroanthus impetiginosus]
Length = 968
Score = 211 bits (537), Expect = 2e-60
Identities = 111/165 (67%), Positives = 126/165 (76%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+SEN+FQCLLRH RD+ALDFL AGQEVLCEWLSRRG D +SRK
Sbjct: 574 SSWLRDDSENLFQCLLRHCRDKALDFLYAGQEVLCEWLSRRGLSVSLSDLYLSSDPQSRK 633
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NLLDEI+ GL+EAE LS++SLLMV N LVE +ENE ME L E I I QQT AE F
Sbjct: 634 NLLDEIYSGLQEAEMLSDISLLMVDLNRHFLVEIPEENEKMEILLSEYIRIAQQTNAELF 693
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+SA+KSV DMQNLVYK+C +NNSF+ MLKAGSKGNLQKL Q
Sbjct: 694 QASISAAKSVFRDMQNLVYKYCSNNNSFIVMLKAGSKGNLQKLVQ 738
>gb|AAY89361.1| RNA polymerase IV largest subunit, partial [Antirrhinum majus]
Length = 1112
Score = 195 bits (495), Expect = 1e-54
Identities = 102/165 (61%), Positives = 123/165 (74%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+ EN+FQCLLRH ++ LD L+A QEVLCEWLSRRG D +SRK
Sbjct: 256 SSWLRDSGENLFQCLLRHCPEKTLDILHAAQEVLCEWLSRRGLSVSLSDLCLSSDPQSRK 315
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NLLD+I GLEEAEK+S++SLLMVG N+ L+E+S+E+EDM K KE + + QQT AE
Sbjct: 316 NLLDDIACGLEEAEKMSDISLLMVGHNQRFLIENSEEDEDMLK-SKEHLYVAQQTSAELC 374
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QASL ASKSV DMQNL+Y + G NS +AMLKAGSKGNLQKLFQ
Sbjct: 375 QASLFASKSVFRDMQNLIYHYAGDTNSLLAMLKAGSKGNLQKLFQ 419
>ref|XP_012835484.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttata]
ref|XP_012835485.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttata]
ref|XP_012835486.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Erythranthe
guttata]
Length = 1447
Score = 190 bits (482), Expect = 9e-53
Identities = 101/165 (61%), Positives = 121/165 (73%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WLND SEN++QCL+R DRAL F +A QEVLCEW++RRG D SRK
Sbjct: 580 SSWLNDTSENLYQCLVRDFPDRALGFFDAAQEVLCEWIARRGLSVSLADLYLSSDQHSRK 639
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NLLDEI YGL+EA+ LS++S LMV N+D LVE +E ME L E++LI QQTKAE F
Sbjct: 640 NLLDEIFYGLQEAKMLSDISSLMVDWNQDFLVECPEE-VGMENLLTEQMLIGQQTKAEIF 698
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+S SKSV+ D+QNL YK+ NNSF+AMLKAGSKGNL KLFQ
Sbjct: 699 QASVSVSKSVVRDIQNLAYKYPSKNNSFIAMLKAGSKGNLAKLFQ 743
>ref|XP_022873259.1| DNA-directed RNA polymerase IV subunit 1 isoform X4 [Olea europaea
var. sylvestris]
Length = 1359
Score = 169 bits (429), Expect = 1e-45
Identities = 89/165 (53%), Positives = 112/165 (67%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+ N+F CLLR+ R LDFL A QEVLCEWLSRRG + S+K
Sbjct: 472 SSWLRDSKGNLFDCLLRYRRYETLDFLFAAQEVLCEWLSRRGLSVSLADLCLSSNPYSQK 531
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NL+DE+ GL+EAE+LS + LLMV N+D LVESS+ENE F K+ + + QQ A
Sbjct: 532 NLIDEVSCGLQEAERLSYIRLLMVSYNQDFLVESSEENEKAVSFGKQYLSVAQQMSAALS 591
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
Q S+SA K V D+QNLVY++ S+NSF+AML AGSKGN+QKL Q
Sbjct: 592 QTSISAFKQVFRDIQNLVYQYGSSDNSFLAMLNAGSKGNVQKLVQ 636
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 169 bits (429), Expect = 1e-45
Identities = 89/165 (53%), Positives = 113/165 (68%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
++WL D EN++ CL+RH DRAL FLN QEVLCEWLSR+G D SRK
Sbjct: 542 TSWLRDADENLYLCLVRHCGDRALGFLNTAQEVLCEWLSRQGLSVSLSDLYISSDRHSRK 601
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NLL+E++YGL+EA +LSEVS LMV + D LVE +ME +KE I +AE F
Sbjct: 602 NLLEEVYYGLQEAGRLSEVSSLMVDQHRDFLVEHMG---NMEDSIKEHTAISSHARAELF 658
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+SAS+SV D+QNLVY++ + NSF++MLK+GSKGNLQK Q
Sbjct: 659 QASVSASRSVFRDLQNLVYRYASNENSFISMLKSGSKGNLQKFVQ 703
>ref|XP_022873258.1| DNA-directed RNA polymerase IV subunit 1 isoform X3 [Olea europaea
var. sylvestris]
Length = 1381
Score = 169 bits (429), Expect = 1e-45
Identities = 89/165 (53%), Positives = 112/165 (67%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+ N+F CLLR+ R LDFL A QEVLCEWLSRRG + S+K
Sbjct: 494 SSWLRDSKGNLFDCLLRYRRYETLDFLFAAQEVLCEWLSRRGLSVSLADLCLSSNPYSQK 553
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NL+DE+ GL+EAE+LS + LLMV N+D LVESS+ENE F K+ + + QQ A
Sbjct: 554 NLIDEVSCGLQEAERLSYIRLLMVSYNQDFLVESSEENEKAVSFGKQYLSVAQQMSAALS 613
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
Q S+SA K V D+QNLVY++ S+NSF+AML AGSKGN+QKL Q
Sbjct: 614 QTSISAFKQVFRDIQNLVYQYGSSDNSFLAMLNAGSKGNVQKLVQ 658
>ref|XP_022873257.1| DNA-directed RNA polymerase IV subunit 1 isoform X2 [Olea europaea
var. sylvestris]
Length = 1394
Score = 169 bits (429), Expect = 1e-45
Identities = 89/165 (53%), Positives = 112/165 (67%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+ N+F CLLR+ R LDFL A QEVLCEWLSRRG + S+K
Sbjct: 507 SSWLRDSKGNLFDCLLRYRRYETLDFLFAAQEVLCEWLSRRGLSVSLADLCLSSNPYSQK 566
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NL+DE+ GL+EAE+LS + LLMV N+D LVESS+ENE F K+ + + QQ A
Sbjct: 567 NLIDEVSCGLQEAERLSYIRLLMVSYNQDFLVESSEENEKAVSFGKQYLSVAQQMSAALS 626
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
Q S+SA K V D+QNLVY++ S+NSF+AML AGSKGN+QKL Q
Sbjct: 627 QTSISAFKQVFRDIQNLVYQYGSSDNSFLAMLNAGSKGNVQKLVQ 671
>ref|XP_022873254.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Olea europaea
var. sylvestris]
ref|XP_022873255.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Olea europaea
var. sylvestris]
ref|XP_022873256.1| DNA-directed RNA polymerase IV subunit 1 isoform X1 [Olea europaea
var. sylvestris]
Length = 1462
Score = 169 bits (429), Expect = 1e-45
Identities = 89/165 (53%), Positives = 112/165 (67%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D+ N+F CLLR+ R LDFL A QEVLCEWLSRRG + S+K
Sbjct: 575 SSWLRDSKGNLFDCLLRYRRYETLDFLFAAQEVLCEWLSRRGLSVSLADLCLSSNPYSQK 634
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NL+DE+ GL+EAE+LS + LLMV N+D LVESS+ENE F K+ + + QQ A
Sbjct: 635 NLIDEVSCGLQEAERLSYIRLLMVSYNQDFLVESSEENEKAVSFGKQYLSVAQQMSAALS 694
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
Q S+SA K V D+QNLVY++ S+NSF+AML AGSKGN+QKL Q
Sbjct: 695 QTSISAFKQVFRDIQNLVYQYGSSDNSFLAMLNAGSKGNVQKLVQ 739
>gb|EYU38999.1| hypothetical protein MIMGU_mgv1a000239mg [Erythranthe guttata]
Length = 1379
Score = 166 bits (421), Expect = 1e-44
Identities = 93/165 (56%), Positives = 111/165 (67%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WLND SEN++QCL EVLCEW++RRG D SRK
Sbjct: 528 SSWLNDTSENLYQCL----------------EVLCEWIARRGLSVSLADLYLSSDQHSRK 571
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
NLLDEI YGL+EA+ LS++S LMV N+D LVE +E ME L E++LI QQTKAE F
Sbjct: 572 NLLDEIFYGLQEAKMLSDISSLMVDWNQDFLVECPEE-VGMENLLTEQMLIGQQTKAEIF 630
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+S SKSV+ D+QNL YK+ NNSF+AMLKAGSKGNL KLFQ
Sbjct: 631 QASVSVSKSVVRDIQNLAYKYPSKNNSFIAMLKAGSKGNLAKLFQ 675
>gb|KZV42123.1| DNA-directed RNA polymerase IV subunit 1-like [Dorcoceras
hygrometricum]
Length = 1425
Score = 157 bits (398), Expect = 2e-41
Identities = 85/165 (51%), Positives = 108/165 (65%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D EN FQCLLRH ++ LDFL A Q+VLCEWLS RG D +S+
Sbjct: 569 SSWLRDCRENFFQCLLRHCGEKTLDFLGAAQDVLCEWLSTRGLSVSLLDLCLTSDPQSQN 628
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++D+I GL+EAE+LS +S LMV N+ L+ESS ++ + F KE + I QQ
Sbjct: 629 NIVDDISSGLQEAEELSYISCLMVDYNQKFLIESSKDSGKISDFQKELMHIVQQKSEALS 688
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+SA K V D+QNLVY + +NS +AMLKAGSKGNLQKL Q
Sbjct: 689 QASISAFKKVFRDIQNLVYHYVDDDNSLIAMLKAGSKGNLQKLVQ 733
>ref|XP_019156687.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Ipomoea nil]
Length = 1437
Score = 153 bits (386), Expect = 7e-40
Identities = 82/165 (49%), Positives = 107/165 (64%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D N+F+ L++H D+ L FL A QEVLCEWLS RG D +RK
Sbjct: 569 SSWLRDTDGNLFRSLVKHYGDQVLHFLFAAQEVLCEWLSMRGLSVSLSDLYLSSDPSTRK 628
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++ EI GL+EAE+LS V+LLMV D LV S+ N++ + F ER+ I++Q A
Sbjct: 629 NMVTEISCGLKEAERLSYVTLLMVDYTRDFLVGRSEGNQNSKIFDVERLSIEKQKSAALS 688
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+ A K V WD+QNL+Y++ NSF+AMLKAGSKGNL KL Q
Sbjct: 689 QASVCAFKDVFWDIQNLLYQYANKGNSFLAMLKAGSKGNLLKLVQ 733
>ref|XP_019156683.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Ipomoea nil]
ref|XP_019156684.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Ipomoea nil]
ref|XP_019156685.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Ipomoea nil]
ref|XP_019156686.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Ipomoea nil]
Length = 1448
Score = 153 bits (386), Expect = 7e-40
Identities = 82/165 (49%), Positives = 107/165 (64%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D N+F+ L++H D+ L FL A QEVLCEWLS RG D +RK
Sbjct: 569 SSWLRDTDGNLFRSLVKHYGDQVLHFLFAAQEVLCEWLSMRGLSVSLSDLYLSSDPSTRK 628
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++ EI GL+EAE+LS V+LLMV D LV S+ N++ + F ER+ I++Q A
Sbjct: 629 NMVTEISCGLKEAERLSYVTLLMVDYTRDFLVGRSEGNQNSKIFDVERLSIEKQKSAALS 688
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+ A K V WD+QNL+Y++ NSF+AMLKAGSKGNL KL Q
Sbjct: 689 QASVCAFKDVFWDIQNLLYQYANKGNSFLAMLKAGSKGNLLKLVQ 733
>dbj|GAV79426.1| RNA_pol_Rpb1_2 domain-containing protein/RNA_pol_Rpb1_3
domain-containing protein/RNA_pol_Rpb1_1
domain-containing protein/RNA_pol_Rpb1_4
domain-containing protein/DUF3223 domain-containing
protein, partial [Cephalotus follicularis]
Length = 1513
Score = 144 bits (364), Expect = 7e-37
Identities = 76/165 (46%), Positives = 107/165 (64%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
SAWL+D N+FQ +++H + + LDFL + QEVLCEWLS RG D++SR
Sbjct: 637 SAWLHDADGNLFQSIIKHCQGKTLDFLYSAQEVLCEWLSMRGFSVSLSDLYLSSDSQSRG 696
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DEI+ GL+EAE+ + + LMV +DLL S +E++D F ER+ ++Q A
Sbjct: 697 NMMDEIYCGLQEAEQTCDYNQLMVESCQDLLAGSGEEDQDAIDFDVERLCYEKQRSAALS 756
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+ A K V D+Q+LVY++ +NS +AM KAGSKGNL KL Q
Sbjct: 757 QASVDAFKQVFRDVQHLVYRYISKDNSLLAMYKAGSKGNLLKLVQ 801
>ref|XP_018820498.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia]
ref|XP_018820499.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia]
ref|XP_018820500.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia]
ref|XP_018820501.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Juglans regia]
Length = 1475
Score = 142 bits (359), Expect = 3e-36
Identities = 78/165 (47%), Positives = 101/165 (61%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S WL DN+ N+FQ L++H + + LDFL A QEVLCEWLS RG ++ SRK
Sbjct: 586 SFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYLSSNSSSRK 645
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DEI GL+EAE+ LMV LVE +EN + ER+ ++Q +
Sbjct: 646 NMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGEENAVVLDV--ERLCYEKQKSSALS 703
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+ A K V D+QNLVYK+ +NSFM+M KAGSKGNL KL Q
Sbjct: 704 QASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSKGNLLKLVQ 748
>ref|XP_018820497.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Juglans regia]
Length = 1544
Score = 142 bits (359), Expect = 3e-36
Identities = 78/165 (47%), Positives = 101/165 (61%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S WL DN+ N+FQ L++H + + LDFL A QEVLCEWLS RG ++ SRK
Sbjct: 655 SFWLRDNNSNLFQSLIKHCQGKVLDFLYAAQEVLCEWLSMRGLSISLSDLYLSSNSSSRK 714
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DEI GL+EAE+ LMV LVE +EN + ER+ ++Q +
Sbjct: 715 NMMDEIFCGLQEAEQTCNFKQLMVDSCRYFLVEGGEENAVVLDV--ERLCYEKQKSSALS 772
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS+ A K V D+QNLVYK+ +NSFM+M KAGSKGNL KL Q
Sbjct: 773 QASVDAFKQVFRDIQNLVYKYASKDNSFMSMFKAGSKGNLLKLVQ 817
>gb|AAY89360.1| RNA polymerase IV largest subunit, partial [Solanum lycopersicum]
Length = 1138
Score = 142 bits (358), Expect = 4e-36
Identities = 79/165 (47%), Positives = 105/165 (63%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D S+N+F L++HN LD L A Q VLCEWLS RG D+ SR+
Sbjct: 256 SSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRE 315
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DE+ GL+EAE+LS + LLM+ N+D L + +E+++ F E + I QQ A
Sbjct: 316 NMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLS 375
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS SA K V D+QNLVY + ++NS +AMLKAGSKGNL KL Q
Sbjct: 376 QASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 420
>ref|XP_010325436.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum lycopersicum]
Length = 1307
Score = 142 bits (358), Expect = 4e-36
Identities = 79/165 (47%), Positives = 105/165 (63%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D S+N+F L++HN LD L A Q VLCEWLS RG D+ SR+
Sbjct: 425 SSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRE 484
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DE+ GL+EAE+LS + LLM+ N+D L + +E+++ F E + I QQ A
Sbjct: 485 NMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLS 544
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS SA K V D+QNLVY + ++NS +AMLKAGSKGNL KL Q
Sbjct: 545 QASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 589
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum]
ref|XP_010325435.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum lycopersicum]
Length = 1446
Score = 142 bits (358), Expect = 4e-36
Identities = 79/165 (47%), Positives = 105/165 (63%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D S+N+F L++HN LD L A Q VLCEWLS RG D+ SR+
Sbjct: 564 SSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRE 623
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DE+ GL+EAE+LS + LLM+ N+D L + +E+++ F E + I QQ A
Sbjct: 624 NMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSMGFDFEFMSIMQQKSASLS 683
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS SA K V D+QNLVY + ++NS +AMLKAGSKGNL KL Q
Sbjct: 684 QASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 728
>ref|XP_015085574.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Solanum
pennellii]
ref|XP_015085575.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Solanum
pennellii]
ref|XP_015085576.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Solanum
pennellii]
ref|XP_015085577.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Solanum
pennellii]
Length = 1446
Score = 142 bits (357), Expect = 6e-36
Identities = 79/165 (47%), Positives = 105/165 (63%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D S+N+F L++HN LD L A Q VLCEWLS RG D+ SR+
Sbjct: 564 SSWLRDASDNLFYSLVKHNGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISADSYSRE 623
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DE+ GL+EAE+LS + LLM+ N+D L + +E+++ F E + I QQ A
Sbjct: 624 NMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGNLEESKNSLGFDFEFMSIMQQKSASLS 683
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS SA K V D+QNLVY + ++NS +AMLKAGSKGNL KL Q
Sbjct: 684 QASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 728
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum tuberosum]
ref|XP_015169636.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1
[Solanum tuberosum]
ref|XP_015169637.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2
[Solanum tuberosum]
Length = 1446
Score = 141 bits (355), Expect = 1e-35
Identities = 79/165 (47%), Positives = 105/165 (63%)
Frame = -3
Query: 495 SAWLNDNSENIFQCLLRHNRDRALDFLNAGQEVLCEWLSRRGXXXXXXXXXXXXDTESRK 316
S+WL D S+N+F L++H+ LD L A Q VLCEWLS RG D+ SR+
Sbjct: 564 SSWLRDVSDNLFYSLVKHHGGDTLDLLYAAQTVLCEWLSMRGLSVSLSDLYISSDSYSRE 623
Query: 315 NLLDEIHYGLEEAEKLSEVSLLMVGGNEDLLVESSDENEDMEKFLKERILIDQQTKAEFF 136
N++DE+ GL+EAE+LS + LLM+ N+D L S +E+++ F E + I QQ A
Sbjct: 624 NMIDEVCSGLQEAERLSYIQLLMIKYNKDFLSGSLEESKNSMGFDFEFMSIMQQKSASLS 683
Query: 135 QASLSASKSVLWDMQNLVYKHCGSNNSFMAMLKAGSKGNLQKLFQ 1
QAS SA K V D+QNLVY + ++NS +AMLKAGSKGNL KL Q
Sbjct: 684 QASASAFKKVFRDIQNLVYNYASNDNSLLAMLKAGSKGNLLKLVQ 728