BLASTX nr result

ID: Rehmannia32_contig00026050 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026050
         (605 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020548472.1| pentatricopeptide repeat-containing protein ...    77   9e-13
gb|PIN07104.1| hypothetical protein CDL12_20332 [Handroanthus im...    76   1e-12
ref|XP_012856600.1| PREDICTED: pentatricopeptide repeat-containi...    63   5e-08
ref|XP_012856599.1| PREDICTED: pentatricopeptide repeat-containi...    57   4e-06

>ref|XP_020548472.1| pentatricopeptide repeat-containing protein At5g50990 [Sesamum
           indicum]
          Length = 547

 Score = 76.6 bits (187), Expect = 9e-13
 Identities = 36/53 (67%), Positives = 42/53 (79%)
 Frame = -2

Query: 160 MEVMRRKLFSLGSPFRWSHTAIFNPKLEINVASPQTVYSITDDQKLFSILESC 2
           MEV+RR+L S GS  RWSHT IF P+    VASPQT+YS++DDQKLF ILESC
Sbjct: 1   MEVVRRRLVSPGSSLRWSHTTIFTPRPYSTVASPQTLYSVSDDQKLFRILESC 53


>gb|PIN07104.1| hypothetical protein CDL12_20332 [Handroanthus impetiginosus]
          Length = 546

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 35/53 (66%), Positives = 42/53 (79%)
 Frame = -2

Query: 160 MEVMRRKLFSLGSPFRWSHTAIFNPKLEINVASPQTVYSITDDQKLFSILESC 2
           MEV+R+ LFSL SPFRWSH AIF+PK    + SPQT+YSIT D+ +F ILESC
Sbjct: 1   MEVLRKGLFSLRSPFRWSHIAIFSPKYHSFIGSPQTLYSITGDETIFHILESC 53


>ref|XP_012856600.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           isoform X2 [Erythranthe guttata]
          Length = 551

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = -2

Query: 151 MRRKLFSLGSPFRWSHTAIFNPKLEINVASPQTVYSITDDQKLFSILESC 2
           +RR+L S   PFR  HTA+F PK    VASPQ +Y ITDD+ LF+ILESC
Sbjct: 9   LRRRLLSPVPPFRRRHTAVFTPKPHPTVASPQNIYPITDDRVLFAILESC 58


>ref|XP_012856599.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
           isoform X1 [Erythranthe guttata]
          Length = 554

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 30/53 (56%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = -2

Query: 151 MRRKLFSLGSPFRWSHTAIFNPKLEINVASPQTVYSIT---DDQKLFSILESC 2
           +RR+L S   PFR  HTA+F PK    VASPQ +Y IT   DD+ LF+ILESC
Sbjct: 9   LRRRLLSPVPPFRRRHTAVFTPKPHPTVASPQNIYPITEYEDDRVLFAILESC 61


Top