BLASTX nr result

ID: Rehmannia32_contig00026015 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00026015
         (754 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023907836.1| putative F-box protein At1g49610 [Quercus su...    61   6e-07
ref|XP_009783054.1| PREDICTED: F-box protein At5g03100-like [Nic...    59   2e-06
ref|XP_004237577.1| PREDICTED: F-box protein At5g03100-like [Sol...    59   3e-06
ref|XP_016498187.1| PREDICTED: F-box protein At5g03100-like [Nic...    59   3e-06
ref|XP_015073035.1| PREDICTED: F-box protein At5g03100-like [Sol...    59   3e-06
ref|XP_015076024.1| PREDICTED: putative F-box/LRR-repeat protein...    59   4e-06

>ref|XP_023907836.1| putative F-box protein At1g49610 [Quercus suber]
          Length = 537

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
 Frame = +3

Query: 72  LLESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNTS 251
           LLESV  VKEL +GP  +                KCKR+ +++ +  ++ LG+  LL +S
Sbjct: 345 LLESVHHVKELTVGPWCLMVLSIMSVKHRPFPSLKCKRLTVKTSMKKWDFLGIASLLQSS 404

Query: 252 PDLDTLIIEVVTPVEKYFNGSNGQILYSIGNKY---------------KIFMKWNLSNLK 386
           P ++TL++++     K  + S  + L   G +Y               KI  K  L  LK
Sbjct: 405 PYVETLVMDI-----KSADNSGSEFL---GRRYFHTRKFDEVSHWKSKKIHFKSLLQYLK 456

Query: 387 HVKVAYCKNMCCGVAVENDDKKCLDFELVIYLLRNAPVLEKLVIT 521
            VK++       G       +K +   +V +LL+NA VLEK+VI+
Sbjct: 457 TVKIS-------GFVERLFHRKEVFISVVQFLLKNAKVLEKMVIS 494


>ref|XP_009783054.1| PREDICTED: F-box protein At5g03100-like [Nicotiana sylvestris]
          Length = 485

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
 Frame = +3

Query: 69  KLLESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNT 248
           +LL SV+ VK L LGP+ I+                CK +K+ + L + +  G+  LL +
Sbjct: 309 ELLLSVAHVKNLELGPLCIECFPILELRGWQFPPSSCKFLKLNAALKHLDFAGIYSLLQS 368

Query: 249 SPDLDTLIIEVVT--PVEKYFNGSN-GQILYSIGNKYKIFMKWNLSNLKHVKVAYCKNMC 419
           S DL+TLII+     P+++  + +N G+ +      Y   +  +L +LK +K +      
Sbjct: 369 SSDLETLIIDWKNHKPIDRLLSYTNEGEQVRRFETHY---VNCSLPHLKTIKFSNFLGSL 425

Query: 420 CGVAVENDDKKCLDFELVIYLLRNAPVLEKLVITS 524
            G+             LV YLL+NA VLEKLVI +
Sbjct: 426 SGIK--------FVLLLVKYLLKNATVLEKLVIAA 452


>ref|XP_004237577.1| PREDICTED: F-box protein At5g03100-like [Solanum lycopersicum]
          Length = 511

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
 Frame = +3

Query: 75  LESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNTSP 254
           LE +S V EL++G  F +               +CK + ++  +    + G+  LL   P
Sbjct: 319 LEKLSNVTELIIGSWFAEVVFMLRLESVILPKLRCKCLTLKLGVSKSNMYGIASLLQNLP 378

Query: 255 DLDTLIIEVVTPVEKYFNGSNGQILYSIGNKYKIFMKWN------LSNLKHVKVAYCKNM 416
            L++L I + + +   +N S+ + + S  +K      W         NLK+VK+  C   
Sbjct: 379 RLESLNIHIKSEI---YNDSSCEHVQSYLDKVNDINFWRWIQNPLFPNLKNVKIVGCVGE 435

Query: 417 CCGVAVENDDKKCLDFELVIYLLRNAPVLEKLVITSIDDHC-KCSRNCGLRYVSSFSDDI 593
           C  + + +    C  F+ + +LL+NA  L+KLVI +    C  CS +C  R++   ++ +
Sbjct: 436 C--IRMWSRMGFCKLFKFLKFLLKNAKALQKLVIVAERRTCIFCSESCVSRHLLKLAEKM 493

Query: 594 IRT 602
           + T
Sbjct: 494 LST 496


>ref|XP_016498187.1| PREDICTED: F-box protein At5g03100-like [Nicotiana tabacum]
          Length = 485

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 48/155 (30%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
 Frame = +3

Query: 69  KLLESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNT 248
           +LL SV+ VK L LGP+ I+                CK +K+ + L + +  G+  LL +
Sbjct: 309 ELLLSVAHVKNLELGPLCIECFPILELRGWQFPPSSCKFLKLNAALKHLDFAGIYSLLQS 368

Query: 249 SPDLDTLIIEVVT--PVEKYFNGSN-GQILYSIGNKYKIFMKWNLSNLKHVKVAYCKNMC 419
           S DL+TLII+     P+++  + +N G+ +      Y   +  +L +LK +K +      
Sbjct: 369 SSDLETLIIDWKNHKPLDRLLSYTNEGEQVRRFETHY---VNCSLPHLKTIKFSNFLGSL 425

Query: 420 CGVAVENDDKKCLDFELVIYLLRNAPVLEKLVITS 524
            G+             LV YLL+NA VLEKLVI +
Sbjct: 426 SGIK--------FVLLLVKYLLKNATVLEKLVIAA 452


>ref|XP_015073035.1| PREDICTED: F-box protein At5g03100-like [Solanum pennellii]
          Length = 511

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
 Frame = +3

Query: 75  LESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNTSP 254
           LE +S V EL++G  F +               +CK + ++  +    + G+  LL   P
Sbjct: 319 LEKLSNVTELIIGSWFAEVVFMLRLESVILPRLRCKCLTLKLGVSKSNMYGIASLLQKLP 378

Query: 255 DLDTLIIEVVTPVEKYFNGSNGQILYSIGNKYKIFMKWN------LSNLKHVKVAYCKNM 416
            L++L + + + +   +N S+ + + S  +K      W         NLK+VK+  C   
Sbjct: 379 RLESLNVHIKSEI---YNDSSCEHVQSYLDKVNDINFWRWIQNPLFPNLKNVKIVGCVGE 435

Query: 417 CCGVAVENDDKKCLDFELVIYLLRNAPVLEKLVITSIDDHC-KCSRNCGLRYVSSFSDDI 593
           C  + + +    C  F+ + +LL+NA  L+KLVI +    C  CS +C  R++   ++ +
Sbjct: 436 C--IRMWSTMGFCKLFKFLKFLLKNAKALQKLVIVAERRTCIFCSESCVSRHLLKLAEKM 493

Query: 594 IRT 602
           + T
Sbjct: 494 LST 496


>ref|XP_015076024.1| PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Solanum
           pennellii]
          Length = 572

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 9/182 (4%)
 Frame = +3

Query: 75  LESVSRVKELVLGPIFIQXXXXXXXXXXXXXXXKCKRVKIRSPLMYYELLGMVCLLNTSP 254
           L+ +SR  EL  G  F Q               +CK + ++  L  + L G   LL  SP
Sbjct: 296 LQKLSRATELTFGTFFTQVLCILQFKGVPIPELECKHIVLKLHLEKFSLYGAAGLLRASP 355

Query: 255 DLDTLIIEVVTP--------VEKYFNGSNGQILYSIGNKYKIFMKWNLSNLKHVKVAYCK 410
            ++TL +E+            E+ +      I     N   +F      NLK+V++A   
Sbjct: 356 LVETLNLEIENQPFDDSRCYFERKYLVKGDNIDLQSYNSSSVF-----PNLKNVEIAISS 410

Query: 411 NMCCGVAVENDDKKCLDFELVIYLLRNAPVLEKLVITSIDDHCK-CSRNCGLRYVSSFSD 587
            MC    +  +  + L F+L  +LL+NA VLEK VI S    C+ C   C  R++S  + 
Sbjct: 411 GMCMKEHLNWEYIRKL-FKLSKFLLKNAVVLEKFVIVSKRRRCEFCGIKCLSRFLSRLAS 469

Query: 588 DI 593
           ++
Sbjct: 470 NL 471


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