BLASTX nr result
ID: Rehmannia32_contig00025894
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00025894
(646 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_024041391.1| uncharacterized protein LOC112098917 [Citrus... 69 6e-20
ref|XP_024038299.1| uncharacterized protein LOC112097344 [Citrus... 55 6e-17
gb|KYP46454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 59 7e-15
dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifo... 58 7e-15
gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifo... 59 1e-14
gb|KYP49651.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 62 1e-14
gb|KYP37665.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 56 2e-14
dbj|GAU37387.1| hypothetical protein TSUD_22610 [Trifolium subte... 54 3e-14
gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 54 4e-14
gb|KYP48938.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 61 4e-14
ref|XP_015389790.1| PREDICTED: uncharacterized protein LOC107178... 77 6e-14
gb|KYP48558.1| hypothetical protein KK1_029709 [Cajanus cajan] 53 9e-14
gb|KYP71832.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan] 53 9e-14
ref|XP_024041983.1| uncharacterized protein LOC112099113 [Citrus... 59 1e-13
gb|KYP65393.1| hypothetical protein KK1_011626 [Cajanus cajan] 55 1e-13
gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 52 3e-13
dbj|GAU25507.1| hypothetical protein TSUD_279910 [Trifolium subt... 53 3e-13
dbj|GAU28865.1| hypothetical protein TSUD_293170 [Trifolium subt... 55 3e-13
gb|PNX77624.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 53 4e-13
gb|KYP45652.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 54 4e-13
>ref|XP_024041391.1| uncharacterized protein LOC112098917 [Citrus clementina]
Length = 272
Score = 68.6 bits (166), Expect(3) = 6e-20
Identities = 43/100 (43%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Frame = +1
Query: 121 ESFLNQPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLE 300
ES+ NQP+ P+ ICA+R +L Q+LVQW D +PE A+WE + +LE
Sbjct: 147 ESYNNQPMSVPIAICAQRQVLVHGIPQSQILVQWQDCAPENATWEALSEFTKQYPNFHLE 206
Query: 301 DKVNFQGRESDTTRPILQAQEKNL-------DKAQEESWE 399
DKV QG E DTT PILQ + N +KAQ S E
Sbjct: 207 DKVIPQGVEGDTT-PILQLDKPNSASSINSEEKAQANSSE 245
Score = 55.1 bits (131), Expect(3) = 6e-20
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSP 142
G VAYRL LP +SKIHPVFH+SLLKPF G+ V +L + P
Sbjct: 107 GAVAYRLDLPHDSKIHPVFHISLLKPFHGQDASQVHSLPSESYNNQP 153
Score = 21.9 bits (45), Expect(3) = 6e-20
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +3
Query: 441 RSSRAKGPPPWMKDY 485
+ S + PP W KDY
Sbjct: 256 KPSLVRKPPKWFKDY 270
>ref|XP_024038299.1| uncharacterized protein LOC112097344 [Citrus clementina]
Length = 1381
Score = 55.5 bits (132), Expect(3) = 6e-17
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +1
Query: 133 NQPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDK 306
NQP+++P ICA R +L+Q Q+LVQW DSSP+ ++WE+ + LEDK
Sbjct: 1288 NQPLYRPAAICAVRTVLKQGVKCRQILVQWQDSSPKNSTWEEFESFCKLYPDLYLEDK 1345
Score = 46.2 bits (108), Expect(3) = 6e-17
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEAT 97
GLVAY+L LP SKIH VFH+SLLK F G T
Sbjct: 1244 GLVAYKLALPSGSKIHLVFHISLLKRFHGSQT 1275
Score = 33.5 bits (75), Expect(3) = 6e-17
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 405 HINPHLEEEKKRRSSRAKGPPPWMKDYIV 491
H+ E + ++S+R + PP W+KDY+V
Sbjct: 1353 HVEEGAEHNESQKSTRIRKPPGWLKDYVV 1381
>gb|KYP46454.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 1139
Score = 58.5 bits (140), Expect(2) = 7e-15
Identities = 36/103 (34%), Positives = 54/103 (52%)
Frame = +1
Query: 136 QPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNF 315
QP+ QP I ER I++ + +PQ LVQW E+A+WED + + NLEDKVN
Sbjct: 1027 QPIIQPAKILKERVIVQGQQQVPQKLVQWQGFENEQATWEDTTALQQAFPDFNLEDKVNL 1086
Query: 316 QGRESDTTRPILQAQEKNLDKAQEESWEKATLIHIWRKKRRGG 444
+G T + ++ +E +K EE E+ W+ + R G
Sbjct: 1087 KGGGIVTRQNMI--KESLAEKESEEHVEE------WKLRARKG 1121
Score = 50.1 bits (118), Expect(2) = 7e-15
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEAT 97
GLVAY+L LP +KIHPVFHVS LKP KGE T
Sbjct: 982 GLVAYKLLLPSTTKIHPVFHVSQLKPCKGEHT 1013
>dbj|GAU10375.1| hypothetical protein TSUD_419040, partial [Trifolium subterraneum]
Length = 708
Score = 58.2 bits (139), Expect(2) = 7e-15
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP + +R+I+R+ ++IPQVL++W S +EA+WED + + NLEDK++F+
Sbjct: 623 PILQPTTVLQKRDIMRKEQVIPQVLIKWEGLSDKEATWEDVDDISGSYPNFNLEDKIDFK 682
Query: 319 G 321
G
Sbjct: 683 G 683
Score = 50.4 bits (119), Expect(2) = 7e-15
Identities = 22/33 (66%), Positives = 27/33 (81%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATE 100
G VAY+L LPPE++IHPVFH+S LK FKG T+
Sbjct: 577 GQVAYKLLLPPEARIHPVFHISQLKQFKGPITD 609
>gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
Length = 1502
Score = 59.3 bits (142), Expect(2) = 1e-14
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP I R I+R K + Q+ +QW +SPEEASWED + + + NLEDKV F+
Sbjct: 1419 PIFQPATILQARTIVRGNKKVHQLQIQWDLNSPEEASWEDLDELQNKFPNINLEDKVVFK 1478
Query: 319 GRESDTTRP----ILQAQE 363
G E RP IL+A E
Sbjct: 1479 G-EGIVMRPNNTNILEASE 1496
Score = 48.5 bits (114), Expect(2) = 1e-14
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSP 142
G VAY+L LP +KIHPVFHVS LKPF G + E L + T P
Sbjct: 1373 GKVAYKLQLPENAKIHPVFHVSQLKPFHGTSQEQYLPLPLTMSDTGP 1419
>gb|KYP49651.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 828
Score = 62.4 bits (150), Expect(2) = 1e-14
Identities = 32/58 (55%), Positives = 35/58 (60%)
Frame = +1
Query: 148 QPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQG 321
QP I R IL++ K IPQVLV W PEEASWEDRN + NLEDKV F G
Sbjct: 695 QPKAILQHRTILKKHKQIPQVLVHWEGQQPEEASWEDRNTIEQSYPLFNLEDKVVFNG 752
Score = 45.4 bits (106), Expect(2) = 1e-14
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 103
G VAY+L LP +KIHPVFHVS LK F+G T
Sbjct: 646 GKVAYKLALPATAKIHPVFHVSQLKAFRGNEVIT 679
>gb|KYP37665.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 976
Score = 55.8 bits (133), Expect(2) = 2e-14
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGE 91
GLVAY+L LPP +KIHPVFHVSLLKP KGE
Sbjct: 810 GLVAYKLALPPTAKIHPVFHVSLLKPCKGE 839
Score = 51.2 bits (121), Expect(2) = 2e-14
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
PV QPL + R ILR+ + IPQVLVQW + +WED + S NLEDKV
Sbjct: 856 PVIQPLKVLQSRVILRENQHIPQVLVQWEGLDISQVTWEDALTLQSEYPNFNLEDKVVVH 915
Query: 319 G 321
G
Sbjct: 916 G 916
>dbj|GAU37387.1| hypothetical protein TSUD_22610 [Trifolium subterraneum]
Length = 1418
Score = 54.3 bits (129), Expect(2) = 3e-14
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + R I+R + + Q+LVQW EA+WED + + + NLEDKV+F
Sbjct: 1296 PIIQPIAVLQARTIMRGTQKVHQILVQWDQLPVSEATWEDLDALQNKFPTLNLEDKVSFN 1355
Query: 319 GRESDTTRPILQAQEKNL---DKAQEESW 396
G ++++ +NL D++ + W
Sbjct: 1356 GEGI-----VMRSNARNLLENDESTKSQW 1379
Score = 52.0 bits (123), Expect(2) = 3e-14
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSPSI 148
G VAY+L LP +KIHPVFHVS LKPFKGE + L + T P I
Sbjct: 1250 GNVAYKLKLPENAKIHPVFHVSQLKPFKGETKDQYLPLPLTMSETGPII 1298
>gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1258
Score = 53.9 bits (128), Expect(2) = 4e-14
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + A R I+R + I QVL+QW S EA+WED + + S NLEDKV F
Sbjct: 1144 PMIQPVSVLATRTIIRGAQRIQQVLIQWDQYSTAEATWEDVDALQSKFPAFNLEDKVAFI 1203
Query: 319 G 321
G
Sbjct: 1204 G 1204
Score = 52.0 bits (123), Expect(2) = 4e-14
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSPSI 148
G VAY+L LP +KIHPVFHVS LKPFKG+ E L + T P I
Sbjct: 1098 GEVAYKLKLPEHAKIHPVFHVSQLKPFKGDNQEQYMPLPLSMTDTGPMI 1146
>gb|KYP48938.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 443
Score = 60.8 bits (146), Expect(2) = 4e-14
Identities = 31/58 (53%), Positives = 35/58 (60%)
Frame = +1
Query: 148 QPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQG 321
QP I R IL++ K IPQVLV W PEEASWEDRN + NL+DKV F G
Sbjct: 310 QPKAILQHRTILKKHKQIPQVLVHWEGQQPEEASWEDRNTIEQSYPLFNLKDKVVFNG 367
Score = 45.1 bits (105), Expect(2) = 4e-14
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 103
G VAY+L LP +KIHPVFHVS LK F+G T
Sbjct: 261 GNVAYKLALPATAKIHPVFHVSQLKAFRGNEVIT 294
>ref|XP_015389790.1| PREDICTED: uncharacterized protein LOC107178745 [Citrus sinensis]
Length = 193
Score = 77.4 bits (189), Expect = 6e-14
Identities = 46/113 (40%), Positives = 64/113 (56%)
Frame = +1
Query: 55 VSRLPPQAFQRRSN*NRVDAAKESFLNQPVHQPLVICAERNILRQ*KLIPQVLVQWSDSS 234
+S L P N N + A S N+ + P ICAER++L+Q K QV VQWSD +
Sbjct: 60 ISLLKPYVGDSHVNINPLPPA--SVNNKTLSSPRAICAERSVLKQGKEFRQVFVQWSDCA 117
Query: 235 PEEASWEDRNLMGSWITETNLEDKVNFQGRESDTTRPILQAQEKNLDKAQEES 393
PE ++WED + E +LEDKVN QG +DTT P + +K+ K +EE+
Sbjct: 118 PENSTWEDYDDFCKTYPELHLEDKVNSQGMGNDTTLP--ETNDKSALKTEEEA 168
>gb|KYP48558.1| hypothetical protein KK1_029709 [Cajanus cajan]
Length = 681
Score = 53.1 bits (126), Expect(2) = 9e-14
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGE 91
G VAY+L LPP +KIHPVFHVSLLKP KGE
Sbjct: 523 GPVAYKLALPPTAKIHPVFHVSLLKPCKGE 552
Score = 51.6 bits (122), Expect(2) = 9e-14
Identities = 29/61 (47%), Positives = 35/61 (57%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
PV QPL + R ILR+ + IPQVLVQW +A+WED + S NLEDKV
Sbjct: 569 PVIQPLKVLQFRVILRENQHIPQVLVQWEGLDISQATWEDALTLQSEYPNFNLEDKVVVH 628
Query: 319 G 321
G
Sbjct: 629 G 629
>gb|KYP71832.1| Transposon Ty3-I Gag-Pol polyprotein [Cajanus cajan]
Length = 511
Score = 53.1 bits (126), Expect(2) = 9e-14
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGE 91
G VAY+L LPP +KIHPVFHVSLLKP KGE
Sbjct: 353 GPVAYKLALPPTAKIHPVFHVSLLKPCKGE 382
Score = 51.6 bits (122), Expect(2) = 9e-14
Identities = 29/61 (47%), Positives = 35/61 (57%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
PV QPL + R ILR+ + IPQVLVQW +A+WED + S NLEDKV
Sbjct: 399 PVIQPLKVLQFRVILRENQHIPQVLVQWEGLDISQATWEDALTLQSEYPNFNLEDKVVVH 458
Query: 319 G 321
G
Sbjct: 459 G 459
>ref|XP_024041983.1| uncharacterized protein LOC112099113 [Citrus clementina]
Length = 291
Score = 58.5 bits (140), Expect(2) = 1e-13
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +1
Query: 136 QPVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNF 315
+P PL I +R I + + QVLVQWS+++P+EA+WE+ + +LEDK +F
Sbjct: 198 EPYSIPLCILDQRTIKTNKQKVKQVLVQWSNTTPDEATWENWEPFHATFPHISLEDKAHF 257
Query: 316 Q--GRESDTTRPILQAQEKNLDK 378
G ++ T +PI QA+ K K
Sbjct: 258 HEGGNDTTTAQPIAQARPKRQPK 280
Score = 46.2 bits (108), Expect(2) = 1e-13
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLK 76
G VAYRL LPPES+IHPVFH+S+LK
Sbjct: 156 GKVAYRLLLPPESRIHPVFHISILK 180
>gb|KYP65393.1| hypothetical protein KK1_011626 [Cajanus cajan]
Length = 269
Score = 55.5 bits (132), Expect(3) = 1e-13
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +1
Query: 148 QPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQG 321
QPL + R IL+ +LIPQVLVQWS EA+WE+ M NLEDKV F G
Sbjct: 156 QPLQVLNRRTILKGEQLIPQVLVQWSGQEVSEATWENAEDMSHLYPNFNLEDKVIFNG 213
Score = 47.8 bits (112), Expect(3) = 1e-13
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATET 103
G VAY+L LP +KIHP+FHVS LK FKG+ T T
Sbjct: 107 GSVAYKLLLPVNAKIHPIFHVSQLKEFKGDDTAT 140
Score = 21.2 bits (43), Expect(3) = 1e-13
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 399 EGHINPHLEEEKKRRSSRAKGPPPWMKDYIVQK 497
EGH+ E RRS+R K + D++ K
Sbjct: 237 EGHVAAFPENALLRRSTRTKMTNTRLGDFVQGK 269
>gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1535
Score = 52.0 bits (123), Expect(2) = 3e-13
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSP 142
G VAY+L LP +KIHPVFHVS LKPFKG A++ L + T P
Sbjct: 1370 GAVAYKLKLPDNAKIHPVFHVSQLKPFKGAASDQYLPLPLTMTETGP 1416
Score = 51.2 bits (121), Expect(2) = 3e-13
Identities = 27/69 (39%), Positives = 39/69 (56%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + R I+R + + Q+LVQW ++ EA+WED + + NLEDKV F
Sbjct: 1416 PIMQPIAVLQARTIMRGTQRVHQILVQWDTNAEAEATWEDFDDLQLKFPTLNLEDKVVFN 1475
Query: 319 GRESDTTRP 345
G E RP
Sbjct: 1476 G-EGIVMRP 1483
>dbj|GAU25507.1| hypothetical protein TSUD_279910 [Trifolium subterraneum]
Length = 1389
Score = 52.8 bits (125), Expect(2) = 3e-13
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + R +++ K + QVLVQW + S EA+WE+ + + NLEDKV +
Sbjct: 1266 PIIQPIEVLQARTVMKGNKKVHQVLVQWDNMSANEATWEELDTLQDKFPSLNLEDKVKIK 1325
Query: 319 G----RESDTTRPILQAQE 363
G + T +L+A +
Sbjct: 1326 GDGIVMRPNATTKVLEAND 1344
Score = 50.1 bits (118), Expect(2) = 3e-13
Identities = 23/33 (69%), Positives = 27/33 (81%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATE 100
G VAY+L LP +KIH VFHVS LKPF+GEA+E
Sbjct: 1220 GEVAYKLKLPDNAKIHSVFHVSQLKPFRGEASE 1252
>dbj|GAU28865.1| hypothetical protein TSUD_293170 [Trifolium subterraneum]
Length = 824
Score = 55.5 bits (132), Expect(2) = 3e-13
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + RNILR+ ++IPQVL++W S + +WED NLEDK++ +
Sbjct: 615 PILQPMAVLKSRNILRKDQVIPQVLIKWESLSNTDVTWEDVKDKAENYPTFNLEDKIDVK 674
Query: 319 GRESDT 336
G S T
Sbjct: 675 GLPSKT 680
Score = 47.4 bits (111), Expect(2) = 3e-13
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2
Query: 8 VAYRLGLPPESKIHPVFHVSLLKPFKGEATE 100
VAY+L LP E+KIHPVF +S LKPFKG+ ++
Sbjct: 571 VAYKLQLPREAKIHPVFRISQLKPFKGQTSD 601
>gb|PNX77624.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
gb|PNY16672.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 367
Score = 52.8 bits (125), Expect(2) = 4e-13
Identities = 28/49 (57%), Positives = 31/49 (63%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKGEATETVSTLRRRVF*TSPSI 148
G VAY+L LP +KIHPVFHVS LKPFKG TE L + T P I
Sbjct: 201 GNVAYKLKLPDNAKIHPVFHVSQLKPFKGNVTEHYLPLPLTMNDTGPII 249
Score = 50.1 bits (118), Expect(2) = 4e-13
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P+ QP+ + R I + + + Q+LVQW +S + A+WED + + NLEDKV F
Sbjct: 247 PIIQPVAVLQARTIRKGTQKVHQILVQWEQNSKDAATWEDLHDLQFKFPTLNLEDKVVFN 306
Query: 319 GRESDTTRPILQAQEKNLDKAQEE 390
G E RP +N D A+ +
Sbjct: 307 G-EGIVMRPNTTKILENDDSAKSQ 329
>gb|KYP45652.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 1210
Score = 54.3 bits (129), Expect(2) = 4e-13
Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 139 PVHQPLVICAERNILRQ*KLIPQVLVQWSDSSPEEASWEDRNLMGSWITETNLEDKVNFQ 318
P QP+ I R IL+ KL+ QVLVQW SS SWED + + NLEDKV +
Sbjct: 1089 PFLQPVAILHARTILQGSKLLSQVLVQWDPSSNVPNSWEDVTFIKTHFPYLNLEDKVVLK 1148
Query: 319 GRESDTTRPI--LQAQEKNLDKAQEE 390
G + RP+ + N++ Q E
Sbjct: 1149 GEGNVMKRPVEPYYMENNNVESLQGE 1174
Score = 48.1 bits (113), Expect(2) = 4e-13
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 2 GLVAYRLGLPPESKIHPVFHVSLLKPFKG 88
G+VAY+L LP ++IHPVFH+S LKPFKG
Sbjct: 1043 GVVAYKLELPETARIHPVFHISQLKPFKG 1071