BLASTX nr result

ID: Rehmannia32_contig00025775 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00025775
         (436 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080667.1| uncharacterized protein LOC105163866 [Sesamu...   100   1e-21
gb|PIM98311.1| putative GTPase [Handroanthus impetiginosus]            57   1e-06
gb|KZV25778.1| hypothetical protein F511_04839 [Dorcoceras hygro...    55   4e-06

>ref|XP_011080667.1| uncharacterized protein LOC105163866 [Sesamum indicum]
 ref|XP_011080668.1| uncharacterized protein LOC105163866 [Sesamum indicum]
 ref|XP_011080669.1| uncharacterized protein LOC105163866 [Sesamum indicum]
          Length = 579

 Score = 99.8 bits (247), Expect = 1e-21
 Identities = 57/114 (50%), Positives = 71/114 (62%), Gaps = 7/114 (6%)
 Frame = +3

Query: 84  KAHWKARVATEESKGSSDGVRTQRPKSSNVDKAHRKSRVATEELKGSSYGVRTVESKRNG 263
           K   K RVA  + KG+ DGVR  RPKSSNVDKA RK RVAT    G S GVRTV+ ++ G
Sbjct: 14  KVSRKVRVAFGKMKGAGDGVRILRPKSSNVDKARRKVRVATGATNGLSDGVRTVQPQKKG 73

Query: 264 SKKVSSIGNSNEAVSYVNVNEKPS-------RDLKSKRNGSKKVSSIGNSNEAV 404
           +KKV S GN N+A+ Y+N NEK S       RDLK+K  G + +  + N N  +
Sbjct: 74  NKKVQSRGNGNDAIPYINANEKSSKSHGRGKRDLKTK-TGKEGLEEVINGNSGL 126


>gb|PIM98311.1| putative GTPase [Handroanthus impetiginosus]
          Length = 564

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 42/112 (37%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
 Frame = +3

Query: 81  DKAHWKARVATEESKGSSDGVRTQRPKSSNVDKAHRKSRVATEELKGSSYGVRTVESKRN 260
           +K   K R A  +S+GS DGVR    KSS V KAHRK RVA++             +K  
Sbjct: 13  NKTSRKVRGALGKSEGSGDGVRKLGLKSSIVGKAHRKVRVASD----------VDRTKNK 62

Query: 261 GSKKVSSIGNSNEAVSYVNVNEKPS-------RDLKSKRNGSKKVSSIGNSN 395
           GS+K  S    ++AV+YV+ +EK S       RDLK+ R G++ + ++ + N
Sbjct: 63  GSRKGQSRNGDDDAVTYVDASEKLSGKGRRGKRDLKT-RTGNEGLEAVMDRN 113



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
 Frame = +3

Query: 3   KVRVALGESKGSSDGVRTQRPKSSIVDKAHWKARVATEESKGSSDGVRTQRPKSSNVD-- 176
           KVR ALG+S+GS DGVR    KSSIV KAH K RVA++  +  + G R  + ++ + D  
Sbjct: 18  KVRGALGKSEGSGDGVRKLGLKSSIVGKAHRKVRVASDVDRTKNKGSRKGQSRNGDDDAV 77

Query: 177 -------KAHRKSRVATEELK--GSSYGVRTVESKRNGSK--------------KVSSIG 287
                  K   K R    +LK    + G+  V  +  G K              K SS  
Sbjct: 78  TYVDASEKLSGKGRRGKRDLKTRTGNEGLEAVMDRNLGRKRKRIYADPGMVEDSKSSSKS 137

Query: 288 NSNEAVSYVNVNEKPSRDLKSKRNGSKKVSSIGNSNEAVSYVNVNEK 428
            SN   S +   +K  R    + N S + +S+  SN+ +    +++K
Sbjct: 138 KSNVVESDLGKGKKVPRGKDHEFNDSSRKTSLVGSNKLMGSELLDKK 184


>gb|KZV25778.1| hypothetical protein F511_04839 [Dorcoceras hygrometricum]
          Length = 552

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = +3

Query: 177 KAHRKSRVATEELKGSSYGVRTVESKRNGSKKVSSIGNSNEAVSYVNVNEKPSRDLKSKR 356
           K HR  +VA  +  G   GVRT+E K+ GSKKV   GN+ + VSYVNV +K ++     +
Sbjct: 14  KVHRNLKVAAAKSGGLVDGVRTLELKKKGSKKVQISGNNGD-VSYVNVFQKSNKSSGKGK 72

Query: 357 NGSKKVSSIGNSN-EAVSYVNVNEK 428
            G K  S  GN   EAV   N ++K
Sbjct: 73  KGEKLKSRTGNDGLEAVVDRNSSQK 97


Top