BLASTX nr result

ID: Rehmannia32_contig00025382 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00025382
         (683 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020554659.1| pentatricopeptide repeat-containing protein ...   128   2e-30
ref|XP_011099383.1| pentatricopeptide repeat-containing protein ...   128   2e-30
gb|PIN13844.1| hypothetical protein CDL12_13539 [Handroanthus im...    91   3e-17

>ref|XP_020554659.1| pentatricopeptide repeat-containing protein At5g67570, chloroplastic
            isoform X2 [Sesamum indicum]
          Length = 669

 Score =  128 bits (322), Expect = 2e-30
 Identities = 81/176 (46%), Positives = 98/176 (55%), Gaps = 26/176 (14%)
 Frame = -2

Query: 682  TVVNFSKALHFMCESSEDSLN--------FDKNPKDS-----IPANTIGSNLDWNLDTRE 542
            TV+N  +AL F+C   EDSLN         D+ PKDS      PANT GS+LDWN +  E
Sbjct: 497  TVLNLCRALQFICGCCEDSLNSIPSTSPRMDELPKDSCDGQNFPANTTGSHLDWNHNILE 556

Query: 541  GNLVNSGDDKDL-------------EVSGLSNNRREGNVRGCHTRFAELFDYDLVSKSSP 401
             + VN+  D D              EVSGLS+NR EGNV    T+F + F+YD  S+ SP
Sbjct: 557  DSSVNTTHDDDYMSNSRLEEDRDSDEVSGLSDNRCEGNVWASTTQFIDHFNYDAFSQISP 616

Query: 400  YDSDDVEFXXXXXXXXXXXXXXDFNFELIIPSSEVDDLHESDTPSAYEILETWKKK 233
              SD ++F               FNFELIIP+SE DD  ES  PSAYEILE+WKKK
Sbjct: 617  SYSDHIDFEHIEHEDSDGDE---FNFELIIPNSEADDSQESAVPSAYEILESWKKK 669


>ref|XP_011099383.1| pentatricopeptide repeat-containing protein At5g67570, chloroplastic
            isoform X1 [Sesamum indicum]
          Length = 868

 Score =  128 bits (322), Expect = 2e-30
 Identities = 81/176 (46%), Positives = 98/176 (55%), Gaps = 26/176 (14%)
 Frame = -2

Query: 682  TVVNFSKALHFMCESSEDSLN--------FDKNPKDS-----IPANTIGSNLDWNLDTRE 542
            TV+N  +AL F+C   EDSLN         D+ PKDS      PANT GS+LDWN +  E
Sbjct: 696  TVLNLCRALQFICGCCEDSLNSIPSTSPRMDELPKDSCDGQNFPANTTGSHLDWNHNILE 755

Query: 541  GNLVNSGDDKDL-------------EVSGLSNNRREGNVRGCHTRFAELFDYDLVSKSSP 401
             + VN+  D D              EVSGLS+NR EGNV    T+F + F+YD  S+ SP
Sbjct: 756  DSSVNTTHDDDYMSNSRLEEDRDSDEVSGLSDNRCEGNVWASTTQFIDHFNYDAFSQISP 815

Query: 400  YDSDDVEFXXXXXXXXXXXXXXDFNFELIIPSSEVDDLHESDTPSAYEILETWKKK 233
              SD ++F               FNFELIIP+SE DD  ES  PSAYEILE+WKKK
Sbjct: 816  SYSDHIDFEHIEHEDSDGDE---FNFELIIPNSEADDSQESAVPSAYEILESWKKK 868


>gb|PIN13844.1| hypothetical protein CDL12_13539 [Handroanthus impetiginosus]
          Length = 830

 Score = 90.5 bits (223), Expect = 3e-17
 Identities = 65/158 (41%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
 Frame = -2

Query: 682  TVVNFSKALHFMCESSEDSLNFDKNPKDSIPANTIGSNLDWNLDTREGNLVNS------- 524
            TV+N SKAL F+C          K PKDS  ++ +  N   +L+ +EGNLVN+       
Sbjct: 697  TVLNLSKALEFICGPM-----MSKAPKDS--SDGMNGN---DLNIQEGNLVNTVHDSVGE 746

Query: 523  GDDKDLEVSGLSNNRREGNVRGCHTRFAELFDY-DLVSKSSPYDSDDVEFXXXXXXXXXX 347
            G D D + S  SNN R  +VR C TRF E FDY D+ S+   ++    +           
Sbjct: 747  GRDSD-KASCFSNNSRADDVRACPTRFLEQFDYNDIESEHMEHEEGQSDVDE-------- 797

Query: 346  XXXXDFNFELIIPSSEVDDLHESDTPSAYEILETWKKK 233
                 F+FELIIP  E +D  +S TPSAYEILE+WKKK
Sbjct: 798  -----FDFELIIPIREDNDRQDSSTPSAYEILESWKKK 830


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