BLASTX nr result

ID: Rehmannia32_contig00025264 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00025264
         (368 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020547624.1| LOW QUALITY PROTEIN: RNA polymerase II C-ter...    75   4e-13
ref|XP_022881652.1| RNA polymerase II C-terminal domain phosphat...    72   4e-12
ref|XP_012831647.1| PREDICTED: RNA polymerase II C-terminal doma...    68   9e-11
ref|XP_012831646.1| PREDICTED: RNA polymerase II C-terminal doma...    68   9e-11
ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal doma...    68   9e-11
gb|PIM98805.1| Phosphoprotein phosphatase [Handroanthus impetigi...    57   7e-07
gb|KZV47455.1| RNA polymerase II C-terminal domain phosphatase-l...    56   2e-06

>ref|XP_020547624.1| LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
           phosphatase-like 3 [Sesamum indicum]
          Length = 1273

 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 37/41 (90%), Positives = 40/41 (97%)
 Frame = +2

Query: 131 MEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ 253
           ME+D KEQ+LVKVEVHDVEEGEISDSASVEEITEEAF+TKQ
Sbjct: 1   MEDDCKEQRLVKVEVHDVEEGEISDSASVEEITEEAFNTKQ 41


>ref|XP_022881652.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Olea
           europaea var. sylvestris]
          Length = 1360

 Score = 72.0 bits (175), Expect = 4e-12
 Identities = 42/65 (64%), Positives = 47/65 (72%), Gaps = 2/65 (3%)
 Frame = +2

Query: 65  MLVGDLNLNCLIK--GNNTLAFLNMEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEA 238
           MLVGDLNL  L +     TL F+ ME D  EQ  V VEV DVEEGEISDS S+EEITEEA
Sbjct: 1   MLVGDLNLTFLFQVFKEKTLVFIQMERD-SEQPQVAVEVLDVEEGEISDSVSIEEITEEA 59

Query: 239 FSTKQ 253
           F++KQ
Sbjct: 60  FNSKQ 64


>ref|XP_012831647.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X3 [Erythranthe guttata]
          Length = 1098

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 131 MEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ 253
           ME+DYK + LVKVEVHDVEEGEISDSAS+EEI+EE F+ KQ
Sbjct: 1   MEDDYKAEHLVKVEVHDVEEGEISDSASIEEISEEDFNAKQ 41


>ref|XP_012831646.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X2 [Erythranthe guttata]
          Length = 1112

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 131 MEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ 253
           ME+DYK + LVKVEVHDVEEGEISDSAS+EEI+EE F+ KQ
Sbjct: 1   MEDDYKAEHLVKVEVHDVEEGEISDSASIEEISEEDFNAKQ 41


>ref|XP_012831645.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3
           isoform X1 [Erythranthe guttata]
 gb|EYU42076.1| hypothetical protein MIMGU_mgv1a000356mg [Erythranthe guttata]
          Length = 1220

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 32/41 (78%), Positives = 37/41 (90%)
 Frame = +2

Query: 131 MEEDYKEQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ 253
           ME+DYK + LVKVEVHDVEEGEISDSAS+EEI+EE F+ KQ
Sbjct: 1   MEDDYKAEHLVKVEVHDVEEGEISDSASIEEISEEDFNAKQ 41


>gb|PIM98805.1| Phosphoprotein phosphatase [Handroanthus impetiginosus]
          Length = 1241

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 35/74 (47%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 149 EQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ-XXXXXXXXXXXKSXXXXXXXXXXX 325
           E+ +VKVE+ DVEEGEISDSASVEEITEE F+TK             KS           
Sbjct: 6   EEHVVKVEIQDVEEGEISDSASVEEITEEIFNTKHGPLSPLPLAPPLKSTVNSNNMNVID 65

Query: 326 XXXXXXXXARVWTM 367
                   ARVWTM
Sbjct: 66  NNTGGGSGARVWTM 79


>gb|KZV47455.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Dorcoceras
           hygrometricum]
          Length = 1303

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +2

Query: 149 EQQLVKVEVHDVEEGEISDSASVEEITEEAFSTKQ 253
           E+ LV+VEVHDVEEGEISDSASVEEIT++ F+ KQ
Sbjct: 6   EELLVQVEVHDVEEGEISDSASVEEITKDDFNAKQ 40


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