BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00024946
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]              149   1e-39
ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207...   145   2e-39
gb|PNX60894.1| copia protein (gag-int-pol protein) [Trifolium pr...   139   9e-39
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]   135   7e-38
gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposo...   141   9e-38
emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]   135   2e-37
gb|PKI78455.1| hypothetical protein CRG98_001167 [Punica granatum]    137   6e-37
gb|PKI51479.1| hypothetical protein CRG98_028190 [Punica granatum]    138   8e-36
gb|PPZ50777.1| hypothetical protein C5P43_36260, partial [Escher...   128   6e-35
gb|AMY96445.1| gag/pol protein [Momordica dioica]                     133   7e-35
emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera]   128   2e-34
gb|PKI58225.1| hypothetical protein CRG98_021396 [Punica granatum]    132   1e-33
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   131   7e-33
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   130   1e-32
gb|PPZ39278.1| hypothetical protein C5P26_25735, partial [Escher...   119   3e-32
gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escher...   129   3e-32
ref|XP_024027517.1| uncharacterized protein LOC112093412 [Morus ...   126   8e-32
gb|PNX85475.1| copia protein (gag-int-pol protein), partial [Tri...   126   2e-31
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     127   2e-31
gb|KYP42262.1| Retrovirus-related Pol polyprotein from transposo...   127   2e-31

>gb|ADJ18449.1| gag/pol protein, partial [Bryonia dioica]
          Length = 1292

 Score =  149 bits (375), Expect(2) = 1e-39
 Identities = 65/99 (65%), Positives = 86/99 (86%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           R F+ K  RAK PLELVHSD+CGPM  +ARGG+EYF++FIDD+SR+G+VYL+H KSE+FE
Sbjct: 488 RSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHKSESFE 547

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           K KE+ AE E ++GK++K +RSDRGGEY+D+KF+DYL+E
Sbjct: 548 KFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIE 586



 Score = 42.4 bits (98), Expect(2) = 1e-39
 Identities = 19/32 (59%), Positives = 24/32 (75%)
 Frame = +2

Query: 5   RINRLAKDGPLRELKVGTLPICESCLEGKITR 100
           RI RL K G L +L+  +LP CESCLEGK+T+
Sbjct: 456 RIERLVKSGILNQLEDNSLPPCESCLEGKMTK 487


>ref|XP_017233167.1| PREDICTED: uncharacterized protein LOC108207215, partial [Daucus
           carota subsp. sativus]
          Length = 3860

 Score =  145 bits (366), Expect(2) = 2e-39
 Identities = 69/99 (69%), Positives = 82/99 (82%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           RPF AK NRAKE L LVHSD+CGPM  QARGG+EYFVTFIDDYSR+GYVYL+ RKSE FE
Sbjct: 634 RPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSECFE 693

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           K KE+ A+ EK+  KS+K +RSDRGGEY+  +F++YL E
Sbjct: 694 KFKEYKAKTEKRHNKSIKSLRSDRGGEYLLGEFREYLSE 732



 Score =  145 bits (366), Expect(2) = 2e-39
 Identities = 69/99 (69%), Positives = 82/99 (82%)
 Frame = +1

Query: 100  RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
            RPF AK NRAKE L LVHSD+CGPM  QARGG+EYFVTFIDDYSR+GYVYL+ RKSE FE
Sbjct: 1849 RPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSECFE 1908

Query: 280  KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            K KE+ A+ EK+  KS+K +RSDRGGEY+  +F++YL E
Sbjct: 1909 KFKEYKAKTEKRHNKSIKSLRSDRGGEYLLGEFREYLSE 1947



 Score =  145 bits (366), Expect(2) = 2e-39
 Identities = 69/99 (69%), Positives = 82/99 (82%)
 Frame = +1

Query: 100  RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
            RPF AK NRAKE L LVHSD+CGPM  QARGG+EYFVTFIDDYSR+GYVYL+ RKSE FE
Sbjct: 3064 RPFKAKGNRAKEVLGLVHSDLCGPMNIQARGGYEYFVTFIDDYSRYGYVYLLRRKSECFE 3123

Query: 280  KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            K KE+ A+ EK+  KS+K +RSDRGGEY+  +F++YL E
Sbjct: 3124 KFKEYKAKTEKRHNKSIKSLRSDRGGEYLLGEFREYLSE 3162



 Score = 44.7 bits (104), Expect(2) = 2e-39
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +2

Query: 5   RINRLAKDGPLRELKVGTLPICESCLEGKIT 97
           RI RL  DGPL  L V   P+CESCLEGK+T
Sbjct: 602 RIQRLVVDGPLGSLAVEPFPVCESCLEGKMT 632



 Score = 44.7 bits (104), Expect(2) = 2e-39
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +2

Query: 5    RINRLAKDGPLRELKVGTLPICESCLEGKIT 97
            RI RL  DGPL  L V   P+CESCLEGK+T
Sbjct: 1817 RIQRLVVDGPLGSLAVEPFPVCESCLEGKMT 1847



 Score = 44.7 bits (104), Expect(2) = 2e-39
 Identities = 20/31 (64%), Positives = 22/31 (70%)
 Frame = +2

Query: 5    RINRLAKDGPLRELKVGTLPICESCLEGKIT 97
            RI RL  DGPL  L V   P+CESCLEGK+T
Sbjct: 3032 RIQRLVVDGPLGSLAVEPFPVCESCLEGKMT 3062


>gb|PNX60894.1| copia protein (gag-int-pol protein) [Trifolium pratense]
          Length = 234

 Score =  139 bits (351), Expect = 9e-39
 Identities = 64/98 (65%), Positives = 77/98 (78%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+ K  RA + L L+H+DVCGPMTT ARGGF+YF+TF DDYSR+GYVYLM  KSE+FEK
Sbjct: 5   PFTGKGERASDLLALIHTDVCGPMTTPARGGFQYFITFTDDYSRYGYVYLMKHKSESFEK 64

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEF  E   QLGK++K +RSDRGGEY+  +F DYL E
Sbjct: 65  FKEFKNEVXNQLGKNIKILRSDRGGEYLSLEFDDYLKE 102


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score =  135 bits (340), Expect(2) = 7e-38
 Identities = 63/99 (63%), Positives = 77/99 (77%)
 Frame = +1

Query: 100  RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
            RPF  K NRA + LEL+HSD+CGPM+ QARGGFEYFVTF DDYSR+GY+YL+ RKSE FE
Sbjct: 807  RPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTDDYSRYGYIYLLCRKSECFE 866

Query: 280  KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            K K F AE E++ GK +K +RSD GGEY+  +F  +L E
Sbjct: 867  KFKAFKAEMEQRHGKYIKTLRSDHGGEYISREFITFLSE 905



 Score = 49.7 bits (117), Expect(2) = 7e-38
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +2

Query: 2   ERINRLAKDGPLRELKVGTLPICESCLEGKITR 100
           +RI+ L KDGPL  LKV  LP CESCLEGK+T+
Sbjct: 774 DRISLLVKDGPLSSLKVEALPTCESCLEGKMTK 806


>gb|EXC18499.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Morus
           notabilis]
          Length = 414

 Score =  141 bits (356), Expect = 9e-38
 Identities = 65/98 (66%), Positives = 79/98 (80%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+AK  RA EPL+L+HSDVCG +  Q RG +EY+ TFIDDYSR+GYVYLM RKSETF K
Sbjct: 5   PFTAKGVRATEPLQLIHSDVCGLLNVQVRGAYEYYATFIDDYSRYGYVYLMQRKSETFGK 64

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            +EF AE EKQLGK +K  RSDR GEY+D +F+D+L+E
Sbjct: 65  FREFRAEVEKQLGKPIKTPRSDREGEYMDQEFRDFLIE 102


>emb|CAN65627.1| hypothetical protein VITISV_032735 [Vitis vinifera]
          Length = 1285

 Score =  135 bits (339), Expect(2) = 2e-37
 Identities = 63/99 (63%), Positives = 76/99 (76%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           RPF  K NRA + LEL+HSD+CGPM+ QARGGFEYFVTF  DYSR+GY+YL+ RKSE FE
Sbjct: 455 RPFPLKGNRANDVLELIHSDLCGPMSVQARGGFEYFVTFTYDYSRYGYIYLLRRKSECFE 514

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           K K F AE EK+ GK +K +RSD GGEY+  +F  +L E
Sbjct: 515 KFKAFKAETEKRHGKYIKTLRSDHGGEYISREFITFLSE 553



 Score = 48.9 bits (115), Expect(2) = 2e-37
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +2

Query: 2   ERINRLAKDGPLRELKVGTLPICESCLEGKIT 97
           +RI+ L KDGPL  LKV  LP CESCLEGK+T
Sbjct: 422 DRISLLVKDGPLSSLKVEALPTCESCLEGKMT 453


>gb|PKI78455.1| hypothetical protein CRG98_001167 [Punica granatum]
          Length = 309

 Score =  137 bits (344), Expect = 6e-37
 Identities = 64/93 (68%), Positives = 75/93 (80%)
 Frame = +1

Query: 118 VNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEKSKEFH 297
           + RAKE LEL+HSDVCGP +  ARGG+ YF+TF DDYSRFGYVYLM  K E+F+K KEF 
Sbjct: 1   MERAKEVLELIHSDVCGPFSEVARGGYSYFITFTDDYSRFGYVYLMKYKHESFKKFKEFK 60

Query: 298 AEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           AE EKQ GKS+K +RSDRGGEY+ TKF D+L E
Sbjct: 61  AEVEKQKGKSIKTLRSDRGGEYMSTKFGDFLKE 93


>gb|PKI51479.1| hypothetical protein CRG98_028190 [Punica granatum]
          Length = 523

 Score =  138 bits (347), Expect = 8e-36
 Identities = 64/98 (65%), Positives = 76/98 (77%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF  ++ RAKE LEL+HSDVCGP +  ARGG+ YF+ F DDYSRFGYVYLM  K E+FEK
Sbjct: 296 PFVGQMERAKEVLELIHSDVCGPFSEMARGGYSYFIIFTDDYSRFGYVYLMKYKHESFEK 355

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEF AE EKQ G S+K +RSDRGGEY+ T+F D+L E
Sbjct: 356 FKEFKAEVEKQKGNSIKTLRSDRGGEYMSTEFGDFLKE 393


>gb|PPZ50777.1| hypothetical protein C5P43_36260, partial [Escherichia coli]
          Length = 191

 Score =  128 bits (322), Expect = 6e-35
 Identities = 60/98 (61%), Positives = 73/98 (74%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF  +  RA+  LEL+HSDVCGP    ARGGF YF+TF DD SRFGY+YLM  K E+FEK
Sbjct: 7   PFVGQGLRAENILELIHSDVCGPFKEMARGGFHYFITFTDDKSRFGYLYLMKYKHESFEK 66

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEF +E E Q GK++K +RSDRGGEY+ T+F +YL E
Sbjct: 67  FKEFKSEVENQTGKNIKALRSDRGGEYLSTEFDEYLRE 104


>gb|AMY96445.1| gag/pol protein [Momordica dioica]
          Length = 1313

 Score =  133 bits (335), Expect(2) = 7e-35
 Identities = 59/99 (59%), Positives = 80/99 (80%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           RPF+ K  RA + LEL+H+DVCGPM+ +ARGG++YF++F DD SR+GYVYL+  KSE+FE
Sbjct: 495 RPFTGKGLRASDLLELIHTDVCGPMSVKARGGYQYFLSFTDDLSRYGYVYLLKHKSESFE 554

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           K KEF AE E ++GK +K +RSDRGGEY+ ++F D+L E
Sbjct: 555 KFKEFQAEVENEIGKKIKTLRSDRGGEYMSSEFGDHLRE 593



 Score = 41.6 bits (96), Expect(2) = 7e-35
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = +2

Query: 5   RINRLAKDGPLRELKVGTLPICESCLEGKITR 100
           RI +L KDG L +L+  +LP CESCLEGK+T+
Sbjct: 463 RIEKLHKDGLLEQLEDFSLPPCESCLEGKMTK 494


>emb|CAN69366.1| hypothetical protein VITISV_037339 [Vitis vinifera]
          Length = 225

 Score =  128 bits (321), Expect = 2e-34
 Identities = 59/99 (59%), Positives = 75/99 (75%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           RPF+ K  RAKE LELVH+DVC P    A GG+EYF+TF+DDYS+FGYVYLMH+KS+T +
Sbjct: 4   RPFTTKEYRAKECLELVHTDVCRPFNVHALGGYEYFITFMDDYSKFGYVYLMHKKSDTLD 63

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           K  E  AE+  QLGK +K +RS+R GEY+ T+F  +L E
Sbjct: 64  KFIELKAESRNQLGKRIKALRSNRVGEYMSTQFDSFLKE 102


>gb|PKI58225.1| hypothetical protein CRG98_021396 [Punica granatum]
          Length = 581

 Score =  132 bits (333), Expect = 1e-33
 Identities = 63/93 (67%), Positives = 73/93 (78%)
 Frame = +1

Query: 118 VNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEKSKEFH 297
           + RAKE LEL+HSDVCGP    ARGG+ YF+TF DDYSRFGYVYLM  K E+FEK KEF 
Sbjct: 1   MERAKEVLELIHSDVCGPFREIARGGYSYFITFADDYSRFGYVYLMKYKHESFEKFKEFK 60

Query: 298 AEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
           AE EKQ GKS+K +RSDRG EY+ T+F D+L E
Sbjct: 61  AEVEKQKGKSIKTLRSDRGEEYMSTEFGDFLKE 93


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  131 bits (330), Expect = 7e-33
 Identities = 57/96 (59%), Positives = 77/96 (80%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+ +  RA + L L+H+DVCGPM+T ARGGF+YF+TF DDYSR+GY+YLM  KSE+FEK
Sbjct: 572 PFTGRNERASDLLALIHTDVCGPMSTTARGGFQYFITFTDDYSRYGYIYLMRHKSESFEK 631

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYL 390
            KEF  E + QLGK++K +RSDRGGE++  +F ++L
Sbjct: 632 FKEFQNEVQNQLGKTIKSLRSDRGGEFLSQEFGNHL 667


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
 gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  130 bits (328), Expect = 1e-32
 Identities = 60/98 (61%), Positives = 76/98 (77%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+ +  RA E L LVH+DVCGPM++ ARGGF YF TF DD+SR+GYVYLM  KSE+FEK
Sbjct: 460 PFTGQSERASELLALVHTDVCGPMSSTARGGFGYFFTFTDDFSRYGYVYLMRHKSESFEK 519

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEFH E +  LGK++K +RSDRGGEY+  +F ++L E
Sbjct: 520 FKEFHNEVQNHLGKTIKYLRSDRGGEYLSLEFGNHLKE 557


>gb|PPZ39278.1| hypothetical protein C5P26_25735, partial [Escherichia coli]
          Length = 116

 Score =  119 bits (298), Expect = 3e-32
 Identities = 56/88 (63%), Positives = 66/88 (75%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF  +  RA+  LEL+HSDVCGP    ARGGF YF+TF DD SRFGY+YLM  K E+FEK
Sbjct: 27  PFVGQGLRAENILELIHSDVCGPFKEMARGGFHYFITFTDDKSRFGYLYLMKYKHESFEK 86

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYV 366
            KEF +E E Q GKS+K +RSDRGGEY+
Sbjct: 87  FKEFKSEVENQTGKSIKALRSDRGGEYL 114


>gb|PPZ05609.1| hypothetical protein C5P41_24865, partial [Escherichia coli]
          Length = 859

 Score =  129 bits (325), Expect = 3e-32
 Identities = 61/98 (62%), Positives = 73/98 (74%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF  +  RA+  LEL+HSDVCGP    ARGGF YF+TF DD SRFGY+YLM  K E+FEK
Sbjct: 82  PFVGQGLRAENILELIHSDVCGPFKEMARGGFHYFITFTDDKSRFGYLYLMKYKHESFEK 141

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEF +E E Q GKS+K +RSDRGGEY+ T+F +YL E
Sbjct: 142 FKEFKSEVENQTGKSIKALRSDRGGEYLSTEFDEYLRE 179


>ref|XP_024027517.1| uncharacterized protein LOC112093412 [Morus notabilis]
          Length = 465

 Score =  126 bits (317), Expect = 8e-32
 Identities = 58/84 (69%), Positives = 69/84 (82%)
 Frame = +1

Query: 100 RPFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFE 279
           RPFSAK  RAK P E++++DVCGP+  +A GG+EYFVTFIDD+SRF Y YLM +KSETFE
Sbjct: 382 RPFSAKGERAKTPFEIINTDVCGPLNVKAMGGYEYFVTFIDDHSRFEYTYLMQKKSETFE 441

Query: 280 KSKEFHAEAEKQLGKSLKCVRSDR 351
           K KEF  E EKQLGKS+K +RSDR
Sbjct: 442 KFKEFRVEVEKQLGKSIKTLRSDR 465


>gb|PNX85475.1| copia protein (gag-int-pol protein), partial [Trifolium pratense]
          Length = 540

 Score =  126 bits (317), Expect = 2e-31
 Identities = 58/98 (59%), Positives = 72/98 (73%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+    RA + L L+H+DVCGP+ T ARGGF YF+TF DD+SRFGYVYLM  KSE+F  
Sbjct: 403 PFTGHKERASDLLGLIHTDVCGPLNTPARGGFHYFITFTDDFSRFGYVYLMKHKSESFTL 462

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            KEF  E E QLGK +K +RSDRGGEY+  +F ++L E
Sbjct: 463 FKEFQNEVENQLGKKIKMLRSDRGGEYLSLEFDNHLKE 500


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  127 bits (319), Expect = 2e-31
 Identities = 56/96 (58%), Positives = 75/96 (78%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+    RA + L LVH+DVCGPM++ ARGG++YF+TF DD+SR+GY+YLM  KSE+FEK
Sbjct: 484 PFTGHSERASDLLALVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEK 543

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYL 390
            KEF  E +  LGK++K +RSDRGGEYV  +F ++L
Sbjct: 544 FKEFQNEVQNHLGKTIKFLRSDRGGEYVSQEFGNHL 579


>gb|KYP42262.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 656

 Score =  127 bits (318), Expect = 2e-31
 Identities = 58/98 (59%), Positives = 73/98 (74%)
 Frame = +1

Query: 103 PFSAKVNRAKEPLELVHSDVCGPMTTQARGGFEYFVTFIDDYSRFGYVYLMHRKSETFEK 282
           PF+ K  RA E L L+H+DVCGPM  QA+GG+ YF+TF DD SR+G+VYLM  KSE+FE 
Sbjct: 410 PFTGKGERASELLGLIHTDVCGPMKIQAKGGYSYFITFTDDMSRYGFVYLMKHKSESFEM 469

Query: 283 SKEFHAEAEKQLGKSLKCVRSDRGGEYVDTKFKDYLLE 396
            K F +E EKQ GK++K +RSDRGGEY+   F D+L E
Sbjct: 470 FKRFRSEVEKQTGKNVKVLRSDRGGEYLSNDFLDHLKE 507