BLASTX nr result
ID: Rehmannia32_contig00024753
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00024753
(375 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHU21730.1| hypothetical protein BC332_06837 [Capsicum chinense] 105 2e-26
gb|EEF49599.1| conserved hypothetical protein [Ricinus communis] 96 1e-20
ref|YP_009242005.1| ribosomal protein S3 (mitochondrion) [Oryza ... 96 2e-20
ref|YP_009241985.1| ribosomal protein S3 (mitochondrion) [Oryza ... 96 2e-20
gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara carduncu... 78 2e-16
ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852... 77 5e-16
gb|EEF32829.1| conserved hypothetical protein [Ricinus communis] 74 7e-15
ref|YP_009381296.1| hypothetical protein AEK19_MT0894 (mitochond... 65 1e-11
gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculu... 69 2e-11
gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]... 60 2e-10
gb|PHT42507.1| hypothetical protein CQW23_16532 [Capsicum baccatum] 52 5e-08
>gb|PHU21730.1| hypothetical protein BC332_06837 [Capsicum chinense]
Length = 152
Score = 105 bits (262), Expect = 2e-26
Identities = 46/49 (93%), Positives = 48/49 (97%)
Frame = +2
Query: 131 LRGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRPAQLERPSLI 277
++GTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRP QLERPSLI
Sbjct: 104 MQGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPGPRRPTQLERPSLI 152
>gb|EEF49599.1| conserved hypothetical protein [Ricinus communis]
Length = 813
Score = 95.9 bits (237), Expect(2) = 1e-20
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = -3
Query: 214 HRGVVARVSRPGILHLAFMISTFNCAPETRSKHARPVCFFHDML*SW 74
H GVVARVSRPGILHLAFMISTF CAPETRSKHARPVCFFHDML SW
Sbjct: 753 HMGVVARVSRPGILHLAFMISTFRCAPETRSKHARPVCFFHDMLWSW 799
Score = 31.6 bits (70), Expect(2) = 1e-20
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 249 GRRGPGCASDWHIG 208
GRRGPGCASD H+G
Sbjct: 742 GRRGPGCASDRHMG 755
>ref|YP_009242005.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
gb|AMQ23369.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1150
Score = 95.5 bits (236), Expect = 2e-20
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +3
Query: 27 GHDFFYSKARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATT 206
G D S ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+T
Sbjct: 58 GTDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRAST 117
Query: 207 PLCANR*RIQGP 242
PL GP
Sbjct: 118 PLMCRSLAHPGP 129
Score = 63.2 bits (152), Expect(2) = 2e-09
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +2
Query: 167 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 331
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 332 -GINKKRSAKFQISE 373
I K FQISE
Sbjct: 160 ESIKNKCLVSFQISE 174
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Frame = +1
Query: 4 RTLRMSGADTTSSILRLEDH--------*KTPRTRACRER 99
RTL+MSG DTTSS R KT RAC +R
Sbjct: 52 RTLQMSGTDTTSSNARRPQEETRDQSMSSKTHTGRACFDR 91
>ref|YP_009241985.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
gb|AMA06704.1| ribosomal protein S3 (mitochondrion) [Oryza minuta]
Length = 1154
Score = 95.5 bits (236), Expect = 2e-20
Identities = 50/72 (69%), Positives = 54/72 (75%)
Frame = +3
Query: 27 GHDFFYSKARRPLKDTQD*SMS*KKHTGRACFDRVSGAQLNVDIMNARCRIPGRETRATT 206
G D S ARRP ++T+D SMS K HTGRACFDRVSGAQLNVDIMNAR RIPGRETRA+T
Sbjct: 58 GTDTTSSNARRPQEETRDQSMSSKTHTGRACFDRVSGAQLNVDIMNARIRIPGRETRAST 117
Query: 207 PLCANR*RIQGP 242
PL GP
Sbjct: 118 PLMCRSLAHPGP 129
Score = 63.2 bits (152), Expect(2) = 2e-09
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +2
Query: 167 EVQDTRPRNPGNHSP-----MCQSLAHPGPRRPAQLERPSLI*EVLIRFG*TSFKNAAAL 331
++ + R R PG + MC+SLAHPGPRRPA LERPSLI +V +RFG T NA
Sbjct: 100 DIMNARIRIPGRETRASTPLMCRSLAHPGPRRPAPLERPSLISKVRLRFGLTDSANALPQ 159
Query: 332 -GINKKRSAKFQISE 373
I K FQISE
Sbjct: 160 ESIKNKCLVSFQISE 174
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 8/40 (20%)
Frame = +1
Query: 4 RTLRMSGADTTSSILRLEDH--------*KTPRTRACRER 99
RTL+MSG DTTSS R KT RAC +R
Sbjct: 52 RTLQMSGTDTTSSNARRPQEETRDQSMSSKTHTGRACFDR 91
>gb|KVF63445.1| hypothetical protein Ccrd_026728 [Cynara cardunculus var. scolymus]
Length = 83
Score = 77.8 bits (190), Expect = 2e-16
Identities = 52/105 (49%), Positives = 52/105 (49%)
Frame = +1
Query: 16 MSGADTTSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS*M*IS*TRGAGYQAEKP 195
MSG DT SS R KTP RACRERSTL R YQAEK
Sbjct: 1 MSGTDTNSSNARRPL--KTPGPRACRERSTLDRR--------------------YQAEKA 38
Query: 196 GQPLPYVXXXXXXXXXXXXXXXXXXXDLRSANSVRIDFIQECRRP 330
GQPLPYV DLRSANSVRIDFIQECRRP
Sbjct: 39 GQPLPYVPIASAARAPAPSSAGEASPDLRSANSVRIDFIQECRRP 83
>ref|XP_012575409.1| PREDICTED: uncharacterized protein LOC105852994 [Cicer arietinum]
Length = 385
Score = 77.0 bits (188), Expect(2) = 5e-16
Identities = 37/50 (74%), Positives = 40/50 (80%)
Frame = -2
Query: 203 GCPGFSAWYPAPRVHDIYIQLCPGDTVEARPPSVLLSRHALVLGVFQWSS 54
GCPGFSAWYP PR+HDIYIQ G+TVEARPPSVLLSRH L L + SS
Sbjct: 107 GCPGFSAWYPTPRIHDIYIQ---GNTVEARPPSVLLSRHVLELAYNRLSS 153
Score = 34.7 bits (78), Expect(2) = 5e-16
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -1
Query: 246 RRGPGCASDWHIGEWLPGF 190
R+GPGCASD HIG PGF
Sbjct: 93 RKGPGCASDRHIGVGCPGF 111
>gb|EEF32829.1| conserved hypothetical protein [Ricinus communis]
Length = 93
Score = 74.3 bits (181), Expect = 7e-15
Identities = 38/48 (79%), Positives = 40/48 (83%)
Frame = +1
Query: 1 GRTLRMSGADTTSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS 144
GRTL+MSG DTTSS +EDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 48 GRTLQMSGTDTTSS--NVEDHRNIPGTRACRERSTLGGRASTVSPGHS 93
>ref|YP_009381296.1| hypothetical protein AEK19_MT0894 (mitochondrion) [Utricularia
reniformis]
gb|ART31124.1| hypothetical protein AEK19_MT0894 (mitochondrion) [Utricularia
reniformis]
Length = 41
Score = 64.7 bits (156), Expect = 1e-11
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +2
Query: 194 PGNHSPMCQSLAHPGPRRPAQLERPSLI 277
PGNHSPMCQSLAHPGPRRPAQLERPSLI
Sbjct: 14 PGNHSPMCQSLAHPGPRRPAQLERPSLI 41
>gb|KVI11367.1| cytochrome c oxidase subunit I [Cynara cardunculus var. scolymus]
Length = 276
Score = 69.3 bits (168), Expect = 2e-11
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = -1
Query: 312 NEVYPNRISTSQIRLGLSS*AGRRGPGCASDWHIGEWLPGFLGLV 178
N+VYPNRI+TS IR GL S AG R PGC S+WHI E LPGFLGLV
Sbjct: 191 NKVYPNRINTSHIRQGLYSRAGHRVPGCTSNWHIEESLPGFLGLV 235
>gb|EEF26991.1| conserved hypothetical protein [Ricinus communis]
gb|EEF27071.1| conserved hypothetical protein [Ricinus communis]
Length = 94
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +1
Query: 34 TSSILRLEDH*KTPRTRACRERSTLGGRASTVSPGHS 144
T +L LEDH P TRACRERSTLGGRASTVSPGHS
Sbjct: 58 TRLLLTLEDHRNIPGTRACRERSTLGGRASTVSPGHS 94
Score = 32.7 bits (73), Expect(2) = 2e-10
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2
Query: 2 GGRCGCPGRTRLLL 43
GGRC CPGRTRLLL
Sbjct: 49 GGRCRCPGRTRLLL 62
>gb|PHT42507.1| hypothetical protein CQW23_16532 [Capsicum baccatum]
Length = 201
Score = 52.4 bits (124), Expect(2) = 5e-08
Identities = 23/39 (58%), Positives = 26/39 (66%)
Frame = +2
Query: 122 RPCLRGTVECRYHEREVQDTRPRNPGNHSPMCQSLAHPG 238
R + GT+EC YHE EVQD RP N NHSP+ Q L H G
Sbjct: 160 RASIVGTIECGYHELEVQDIRPINSSNHSPVYQPLVHSG 198
Score = 32.3 bits (72), Expect(2) = 5e-08
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +1
Query: 46 LRLEDH*KTPRTRACRERSTLGGRASTV 129
L LEDH K R ACRERS L RAS V
Sbjct: 137 LMLEDHEKIFRIIACRERSVLDRRASIV 164