BLASTX nr result
ID: Rehmannia32_contig00024672
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00024672
(495 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 57 2e-11
emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera] 55 2e-11
emb|CAN74165.1| hypothetical protein VITISV_026445 [Vitis vinifera] 56 5e-11
gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposo... 54 8e-11
gb|KYP62017.1| Retrovirus-related Pol polyprotein from transposo... 54 1e-10
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera] 53 1e-10
gb|KYP45563.1| Retrovirus-related Pol polyprotein from transposo... 56 4e-10
gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposo... 54 6e-10
ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LR... 51 2e-09
gb|PKI78357.1| hypothetical protein CRG98_001300 [Punica granatum] 57 4e-09
gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposo... 52 4e-09
gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposo... 54 5e-09
gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposo... 54 6e-09
gb|PKU59787.1| Retrovirus-related Pol polyprotein from transposo... 52 6e-09
ref|XP_015060410.1| PREDICTED: uncharacterized protein LOC107006... 50 6e-09
gb|PON66928.1| Bulb-type lectin domain containing protein [Trema... 50 6e-09
gb|PNX75408.1| putative retrotransposon Ty1-copia subclass prote... 54 8e-09
gb|PNX54398.1| hypothetical protein L195_g048017, partial [Trifo... 54 8e-09
gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinen... 48 1e-08
ref|XP_015389192.1| PREDICTED: uncharacterized protein LOC107178... 47 2e-08
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 57.4 bits (137), Expect(3) = 2e-11
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 9/77 (11%)
Frame = -1
Query: 273 YIQINNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FV 121
Y Q +N L A+GYS S+FA C D+R+ TS Y+F++ GG ++ FV
Sbjct: 1156 YRQTDN-LDAIGYSDSDFAGCVDSRRSTSGYIFMMAGGAISWGSVKQSLAATSTMEAEFV 1214
Query: 120 SCFDAMSLAIWLRSFIS 70
SCF+A S +WL+SFIS
Sbjct: 1215 SCFEATSHGVWLKSFIS 1231
Score = 33.9 bits (76), Expect(3) = 2e-11
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A GML YQSN G+++ AAKKV+ YLQ
Sbjct: 1120 AVGMLGRYQSNPGIDHWRAAKKVLRYLQ 1147
Score = 24.3 bits (51), Expect(3) = 2e-11
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L+I+CDN VF+AK
Sbjct: 1243 LRIFCDNSAAVFMAK 1257
>emb|CAN71425.1| hypothetical protein VITISV_002520 [Vitis vinifera]
Length = 480
Score = 55.5 bits (132), Expect(3) = 2e-11
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 100
L+ VGYS S+FA C D+ K TS Y+F+L GG ++ F+SCF+A S
Sbjct: 321 LEVVGYSDSDFAGCVDSHKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATS 380
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 381 HGVWLKSFIS 390
Score = 35.0 bits (79), Expect(3) = 2e-11
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A GML YQSN G+++ AAKKVM YLQ
Sbjct: 279 AVGMLGRYQSNPGIDHWKAAKKVMRYLQ 306
Score = 25.0 bits (53), Expect(3) = 2e-11
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L IYCDN VF+AK
Sbjct: 402 LSIYCDNSAAVFMAK 416
>emb|CAN74165.1| hypothetical protein VITISV_026445 [Vitis vinifera]
Length = 378
Score = 55.8 bits (133), Expect(3) = 5e-11
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 100
L+ VGYS S+FA C D+ K TS Y+F+LVGG ++ F+SCF+A S
Sbjct: 219 LEVVGYSDSDFASCVDSCKSTSGYIFILVGGAISWRSVKQTMTATSTMEAEFISCFEATS 278
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 279 HGVWLKSFIS 288
Score = 32.7 bits (73), Expect(3) = 5e-11
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A GML YQSN +++ AAKKVM YLQ
Sbjct: 177 AVGMLGRYQSNPSIDHWKAAKKVMRYLQ 204
Score = 25.8 bits (55), Expect(3) = 5e-11
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L IYCDN VF+AK
Sbjct: 300 LSIYCDNLAAVFMAK 314
>gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 425
Score = 54.3 bits (129), Expect(3) = 8e-11
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 100
L+ +GYS S+FA C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 266 LEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATS 325
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 326 HGVWLKSFIS 335
Score = 33.1 bits (74), Expect(3) = 8e-11
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 224 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 251
Score = 26.2 bits (56), Expect(3) = 8e-11
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
LK+YCDN VF+AK
Sbjct: 347 LKLYCDNSAAVFMAK 361
>gb|KYP62017.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 215
Score = 54.3 bits (129), Expect(3) = 1e-10
Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 100
L+ +GYS S+FA C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 56 LEVIGYSDSDFAGCIDTRKSTSGYVFMLACGAVSWSSRKQTLTATSTMEAEFVSCFEATS 115
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 116 HGVWLKSFIS 125
Score = 33.1 bits (74), Expect(3) = 1e-10
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 14 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 41
Score = 25.8 bits (55), Expect(3) = 1e-10
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
LK+YCDN +F+AK
Sbjct: 137 LKLYCDNSAAIFMAK 151
>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
Length = 745
Score = 53.1 bits (126), Expect(3) = 1e-10
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 9/69 (13%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 100
L+ VGYS S+FA C D+RK TS Y+F+L GG ++ F+SCF+ S
Sbjct: 547 LEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFETTS 606
Query: 99 LAIWLRSFI 73
+WL SFI
Sbjct: 607 HGVWLTSFI 615
Score = 33.5 bits (75), Expect(3) = 1e-10
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A GML YQSN G ++ AAKKVM YLQ
Sbjct: 505 AVGMLGRYQSNPGKDHWKAAKKVMRYLQ 532
Score = 26.2 bits (56), Expect(3) = 1e-10
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L IYCDN VVF+AK
Sbjct: 628 LSIYCDNSVVVFMAK 642
>gb|KYP45563.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 338
Score = 55.8 bits (133), Expect(2) = 4e-10
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFD 109
+N+LK +GYS S+FA C D+RK T YVFLL GG + FV+CF+
Sbjct: 241 SNHLKVIGYSDSDFARCVDSRKSTLGYVFLLAGGAISWKSAKQTVVASSTIEAEFVACFE 300
Query: 108 AMSLAIWLRSFIS 70
A A WLR+FIS
Sbjct: 301 ATIQANWLRNFIS 313
Score = 35.8 bits (81), Expect(2) = 4e-10
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQEPNARSL 272
RP ++ AGML YQSN G+E+ AKKV+ YLQ L
Sbjct: 196 RPNISFVAGMLGRYQSNPGMEHWKVAKKVLRYLQRTKCHML 236
>gb|KYP63416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 278
Score = 53.5 bits (127), Expect(2) = 6e-10
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 109
+N+L+ +GYS S+FA C D+RK T YVF+L GG + FV+CF+
Sbjct: 114 SNHLEVIGYSDSDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFE 173
Query: 108 AMSLAIWLRSFIS 70
A A WLR+FIS
Sbjct: 174 ATIQANWLRNFIS 186
Score = 37.7 bits (86), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ AAGML YQSN G+E+ AAKKV+ YLQ
Sbjct: 69 RPDISFAAGMLGRYQSNPGMEHWKAAKKVLRYLQ 102
>ref|XP_010559036.1| PREDICTED: LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein
At1g16930-like [Tarenaya hassleriana]
Length = 679
Score = 51.2 bits (121), Expect(3) = 2e-09
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 109
+N+L+ +GYS S++A C DTRK Y+FLL GG + FV+CF+
Sbjct: 97 SNHLEVIGYSDSDYAVCVDTRKSNFGYLFLLAGGAVSWRSGKQSVIAASTMEAEFVACFE 156
Query: 108 AMSLAIWLRSFIS 70
A ++W+R+FIS
Sbjct: 157 ATVHSLWMRNFIS 169
Score = 34.3 bits (77), Expect(3) = 2e-09
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ A GML YQSN G+ + AAKKV+ YLQ
Sbjct: 52 RPDISFAVGMLGRYQSNPGMNHWKAAKKVLRYLQ 85
Score = 23.5 bits (49), Expect(3) = 2e-09
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L+IYCDN +F +K
Sbjct: 181 LRIYCDNSAAIFFSK 195
>gb|PKI78357.1| hypothetical protein CRG98_001300 [Punica granatum]
Length = 376
Score = 57.0 bits (136), Expect(2) = 4e-09
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 9/80 (11%)
Frame = -1
Query: 282 REAYIQINNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC 130
R Y+ I+ +L+ VGYS+++FA C D+RK TS YVFL+ GG +I
Sbjct: 209 RLTYMHID-HLRVVGYSNADFAGCVDSRKCTSGYVFLIAGGAISWRSIKQSMVATSTMEA 267
Query: 129 *FVSCFDAMSLAIWLRSFIS 70
F++C++A + A+WL++FIS
Sbjct: 268 EFIACYEATTQALWLKNFIS 287
Score = 31.6 bits (70), Expect(2) = 4e-09
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = -3
Query: 445 IYRVFRINQILDHDTPPL----RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
IY++ R + D P RP + A G+L YQSN G+++ AAKKV+ Y Q
Sbjct: 148 IYKILRRFSMKDCRPSPAPVCTRPDICLAVGLLGRYQSNPGIQHWVAAKKVIRYFQ 203
>gb|KYP68427.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 216
Score = 52.0 bits (123), Expect(2) = 4e-09
Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGG-----ENKC*AINS----C*FVSCFD 109
+N+L+ +GYS S+FA C D+RK T YVFLL G K + S FV+CF+
Sbjct: 53 SNHLEVIGYSDSDFAECVDSRKSTLGYVFLLARGAISWKSEKQIVVASLTMKAEFVACFE 112
Query: 108 AMSLAIWLRSFIS 70
A A WLR+FIS
Sbjct: 113 ATIQANWLRNFIS 125
Score = 36.6 bits (83), Expect(2) = 4e-09
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ AGML YQSN G+E+ AAKKV+ YLQ
Sbjct: 8 RPNISFVAGMLGRYQSNPGMEHWKAAKKVLRYLQ 41
>gb|KYP61428.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 402
Score = 53.5 bits (127), Expect(2) = 5e-09
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 109
+N+L+ +GYS S+FA C D+RK T YVF+L GG + FV+CF+
Sbjct: 238 SNHLEVIGYSDSDFAGCVDSRKSTLGYVFILAGGAISWKSAKQTVVASSTMEAEFVACFE 297
Query: 108 AMSLAIWLRSFIS 70
A A WLR+FIS
Sbjct: 298 ATIQANWLRNFIS 310
Score = 34.7 bits (78), Expect(2) = 5e-09
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ AA ML YQSN G+E+ AAKKV+ YLQ
Sbjct: 193 RPDISFAARMLGRYQSNPGMEHWKAAKKVLRYLQ 226
>gb|KYP64910.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 371
Score = 54.3 bits (129), Expect(2) = 6e-09
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 109
+++L+ +GYS S+FA C DTRK T Y+F+L GG + FV+CF+
Sbjct: 250 SDHLEVIGYSDSDFAGCVDTRKSTFDYLFMLAGGAISWKSAKQSVIAASTMEAEFVACFE 309
Query: 108 AMSLAIWLRSFIS 70
AM A WLR+FIS
Sbjct: 310 AMVQAKWLRNFIS 322
Score = 33.5 bits (75), Expect(2) = 6e-09
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ A GML YQSN +++ AAKKVM YLQ
Sbjct: 205 RPDISFAVGMLGRYQSNPDIDHWKAAKKVMRYLQ 238
>gb|PKU59787.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 216
Score = 52.0 bits (123), Expect(2) = 6e-09
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFD 109
+++L+ +GYS S+FA C D+RK T YVFLL GG + FV+CF+
Sbjct: 53 SDHLEVIGYSDSDFAGCLDSRKSTFGYVFLLSGGAISWKSAKQSVIAASTMEAEFVACFE 112
Query: 108 AMSLAIWLRSFIS 70
A +WLR+FIS
Sbjct: 113 ATIQGLWLRNFIS 125
Score = 35.8 bits (81), Expect(2) = 6e-09
Identities = 20/34 (58%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ A GML YQSN GL++ AAKKV+ YLQ
Sbjct: 8 RPDISFAVGMLGRYQSNPGLDHWKAAKKVLRYLQ 41
>ref|XP_015060410.1| PREDICTED: uncharacterized protein LOC107006351, partial [Solanum
pennellii]
Length = 476
Score = 50.4 bits (119), Expect(3) = 6e-09
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 9/73 (12%)
Frame = -1
Query: 261 NNYLKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFD 109
++YL+ +G+S S+F C D+RK TS Y+F+LVGG + FVS F+
Sbjct: 97 SDYLEVIGHSDSDFVGCVDSRKSTSGYIFMLVGGAISWRSAKQTLVTTSTMEAKFVSSFE 156
Query: 108 AMSLAIWLRSFIS 70
A S +WL+S IS
Sbjct: 157 ATSHGVWLKSSIS 169
Score = 32.7 bits (73), Expect(3) = 6e-09
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 370 GMLDIYQSNHGLEN*GAAKKVM*YLQ 293
GML+ Y+SN GL++ AAKKV+ YLQ
Sbjct: 60 GMLERYKSNPGLDHWRAAKKVLRYLQ 85
Score = 23.9 bits (50), Expect(3) = 6e-09
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L++YCDN VF+AK
Sbjct: 181 LRLYCDNSAGVFMAK 195
>gb|PON66928.1| Bulb-type lectin domain containing protein [Trema orientalis]
Length = 434
Score = 49.7 bits (117), Expect(3) = 6e-09
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENKC*AIN---------SC*FVSCFDAMS 100
L+ +GYS S+F C D+RK TS Y+F+ G + FVSCF+A+S
Sbjct: 89 LEVIGYSDSDFIGCIDSRKSTSEYIFMFTDGAVSWRSAKQTLTTTSTMEVEFVSCFEAIS 148
Query: 99 LAIWLRSFIS 70
IW++SFIS
Sbjct: 149 QDIWIKSFIS 158
Score = 30.8 bits (68), Expect(3) = 6e-09
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQE 290
RP + + GML YQSN + + AKKVM YLQE
Sbjct: 41 RPNIAYSVGMLGRYQSNLDINHWKVAKKVMRYLQE 75
Score = 26.6 bits (57), Expect(3) = 6e-09
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
LKIYCDN +VF+ K
Sbjct: 170 LKIYCDNSAIVFMTK 184
>gb|PNX75408.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 868
Score = 54.3 bits (129), Expect(2) = 8e-09
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 100
L+ +GYS S++A C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 795 LEVIGYSDSDYAGCIDTRKSTSGYVFMLASGAVSWRSAKQTLTATSTMEAEFVSCFEATS 854
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 855 HGVWLKSFIS 864
Score = 33.1 bits (74), Expect(2) = 8e-09
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 753 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 780
>gb|PNX54398.1| hypothetical protein L195_g048017, partial [Trifolium pratense]
Length = 213
Score = 54.3 bits (129), Expect(2) = 8e-09
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 100
L+ +GYS S++A C DTRK TS YVF+L G + FVSCF+A S
Sbjct: 140 LEVIGYSDSDYAGCIDTRKSTSGYVFMLASGAVSWRSAKQTLTATSTMEAEFVSCFEATS 199
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 200 HGVWLKSFIS 209
Score = 33.1 bits (74), Expect(2) = 8e-09
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
A G+L YQSN G+++ AAKKVM YLQ
Sbjct: 98 AVGVLGRYQSNPGVDHWKAAKKVMRYLQ 125
>gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 538
Score = 48.1 bits (113), Expect(3) = 1e-08
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGG-------ENKC*AINS--C*FVSCFDAMS 100
L+ VGYS S+ C DT K TS Y+FLL GG + C ++ FV+ F+A +
Sbjct: 379 LEVVGYSDSDLGGCLDTGKSTSGYLFLLAGGAVSWRSAKQTCITTSTMQAEFVAVFEATT 438
Query: 99 LAIWLRSFIS 70
A+WLR+FIS
Sbjct: 439 HALWLRNFIS 448
Score = 34.7 bits (78), Expect(3) = 1e-08
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = -3
Query: 391 RPTVN-AAGMLDIYQSNHGLEN*GAAKKVM*YLQ 293
RP ++ A GML YQSN G+++ A KKVM YLQ
Sbjct: 331 RPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQ 364
Score = 23.5 bits (49), Expect(3) = 1e-08
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L+I+CDN VVF +K
Sbjct: 460 LRIHCDNTAVVFFSK 474
>ref|XP_015389192.1| PREDICTED: uncharacterized protein LOC107178466 [Citrus sinensis]
Length = 354
Score = 47.0 bits (110), Expect(3) = 2e-08
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Frame = -1
Query: 252 LKAVGYSHSEFA*CHDTRK*TSLYVFLLVGGENK---------C*AINSC*FVSCFDAMS 100
L+ +GYS S+FA C D+RK TS Y+F+L G + F+S +A S
Sbjct: 240 LEVIGYSDSDFAGCVDSRKSTSGYIFMLASGAISWRSTKQTLTATSTMEAEFISYVEATS 299
Query: 99 LAIWLRSFIS 70
+WL+SFIS
Sbjct: 300 YGVWLKSFIS 309
Score = 32.3 bits (72), Expect(3) = 2e-08
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = -3
Query: 376 AAGMLDIYQSNHGLEN*GAAKKVM*YLQEPN 284
A G+L YQSN GL++ A KKV+ YLQ N
Sbjct: 198 AVGILGRYQSNPGLDHWKAVKKVIRYLQGTN 228
Score = 25.8 bits (55), Expect(3) = 2e-08
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 68 LKIYCDNFDVVFLAK 24
L+IYCDN VF+AK
Sbjct: 321 LRIYCDNSAAVFMAK 335