BLASTX nr result
ID: Rehmannia32_contig00024661
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00024661
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN01704.1| hypothetical protein CDL12_25790 [Handroanthus im... 100 2e-21
ref|XP_011098928.1| double-stranded RNA-binding protein 3 [Sesam... 83 5e-15
ref|XP_002275052.3| PREDICTED: double-stranded RNA-binding prote... 59 1e-06
ref|XP_019080214.1| PREDICTED: double-stranded RNA-binding prote... 59 1e-06
emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera] 59 1e-06
ref|XP_006468839.1| PREDICTED: double-stranded RNA-binding prote... 57 5e-06
dbj|GAV88793.1| dsrm domain-containing protein [Cephalotus folli... 57 5e-06
>gb|PIN01704.1| hypothetical protein CDL12_25790 [Handroanthus impetiginosus]
Length = 430
Score = 100 bits (250), Expect = 2e-21
Identities = 68/125 (54%), Positives = 78/125 (62%), Gaps = 24/125 (19%)
Frame = +2
Query: 2 SQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMKGSNN---SSSHFYGRKPVYNP 163
SQVKV E PP+L+E D EWI+KISEAI KK P E++G +N SSS YG KPVYNP
Sbjct: 280 SQVKVQETPPKLDEHQRDDQEWINKISEAI-KKKPIEVEGCSNVSSSSSVLYGGKPVYNP 338
Query: 164 FPLPFPLPATDHT------------------CSQIGRSTFTGGVYQQNSRSIAPAVQVRS 289
FPL F L DHT S++GRSTF GVYQ + IAPAVQ+RS
Sbjct: 339 FPLNFSL--LDHTSENARTPILDPTTLFKGPSSEMGRSTF-NGVYQ--PQRIAPAVQIRS 393
Query: 290 VIPVC 304
VIPVC
Sbjct: 394 VIPVC 398
>ref|XP_011098928.1| double-stranded RNA-binding protein 3 [Sesamum indicum]
Length = 468
Score = 83.2 bits (204), Expect = 5e-15
Identities = 66/161 (40%), Positives = 79/161 (49%), Gaps = 34/161 (21%)
Frame = +2
Query: 2 SQVKVPEIPPELNER----DHEWISKISEAIIKKNPTEMKGSNNSSSHFYGRKPVYNPFP 169
SQVK+ E P L + D EWISKISEAI K + G ++SSS FYG K VYNPF
Sbjct: 291 SQVKIQETPSPLFDEHQRDDLEWISKISEAIKNKYGGTVSGRSHSSSIFYGGKAVYNPFA 350
Query: 170 LP------FPLP------ATDH---------TCSQIGRSTFTGGVYQQNSRS-------- 262
LP FPLP + H T SQ F G S++
Sbjct: 351 LPSWRNLNFPLPDEAAESSRTHKGSNILDPITPSQTAIPEFKGSSTSCGSQTGRPGFSGV 410
Query: 263 -IAPAVQVRSVIPVCXXXXXXXXNQTAMKECSSTSTPPSTA 382
IAP VQ+RSVIPVC + T+ KE +S S PPST+
Sbjct: 411 RIAPEVQIRSVIPVCAAPPVRLRSSTSTKEGASAS-PPSTS 450
>ref|XP_002275052.3| PREDICTED: double-stranded RNA-binding protein 3 isoform X2 [Vitis
vinifera]
emb|CBI21312.3| unnamed protein product, partial [Vitis vinifera]
Length = 481
Score = 58.9 bits (141), Expect = 1e-06
Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 34/135 (25%)
Frame = +2
Query: 2 SQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMK-GSNNSSSHFYGRKPVYNPFP 169
SQVK+PE+P L E + EW+ S I K PTE + SN ++S YG +Y PFP
Sbjct: 292 SQVKMPEVPTLLEEHQRDEEEWLDGKSNLIRK--PTEKECPSNANASSVYGANSIYRPFP 349
Query: 170 LP------FPLPATDHTCSQ------------------------IGRSTFTGGVYQQNSR 259
LP LP + H + I R+ TGG
Sbjct: 350 LPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGIHIPRTMGTGGF---QPH 406
Query: 260 SIAPAVQVRSVIPVC 304
IAPAVQ+RSVIPVC
Sbjct: 407 RIAPAVQIRSVIPVC 421
>ref|XP_019080214.1| PREDICTED: double-stranded RNA-binding protein 3 isoform X1 [Vitis
vinifera]
Length = 484
Score = 58.9 bits (141), Expect = 1e-06
Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 34/135 (25%)
Frame = +2
Query: 2 SQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMK-GSNNSSSHFYGRKPVYNPFP 169
SQVK+PE+P L E + EW+ S I K PTE + SN ++S YG +Y PFP
Sbjct: 295 SQVKMPEVPTLLEEHQRDEEEWLDGKSNLIRK--PTEKECPSNANASSVYGANSIYRPFP 352
Query: 170 LP------FPLPATDHTCSQ------------------------IGRSTFTGGVYQQNSR 259
LP LP + H + I R+ TGG
Sbjct: 353 LPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGIHIPRTMGTGGF---QPH 409
Query: 260 SIAPAVQVRSVIPVC 304
IAPAVQ+RSVIPVC
Sbjct: 410 RIAPAVQIRSVIPVC 424
>emb|CAN71476.1| hypothetical protein VITISV_038619 [Vitis vinifera]
Length = 552
Score = 58.9 bits (141), Expect = 1e-06
Identities = 49/135 (36%), Positives = 61/135 (45%), Gaps = 34/135 (25%)
Frame = +2
Query: 2 SQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMK-GSNNSSSHFYGRKPVYNPFP 169
SQVK+PE+P L E + EW+ S I K PTE + SN ++S YG +Y PFP
Sbjct: 363 SQVKMPEVPTLLEEHQRDEEEWLDGKSNLIRK--PTEKECPSNANASSVYGANSIYRPFP 420
Query: 170 LP------FPLPATDHTCSQ------------------------IGRSTFTGGVYQQNSR 259
LP LP + H + I R+ TGG
Sbjct: 421 LPNAGKLNTSLPDSPHQPHEQTHIKNNPFGNPTPSAMKGSAGIHIPRTMGTGGF---QPH 477
Query: 260 SIAPAVQVRSVIPVC 304
IAPAVQ+RSVIPVC
Sbjct: 478 RIAPAVQIRSVIPVC 492
>ref|XP_006468839.1| PREDICTED: double-stranded RNA-binding protein 3 [Citrus sinensis]
Length = 473
Score = 57.0 bits (136), Expect = 5e-06
Identities = 52/156 (33%), Positives = 71/156 (45%), Gaps = 26/156 (16%)
Frame = +2
Query: 2 SQVKVPEIPPELNERDHE------WISKISEAIIKKNPTEMKGSNNSSSHFYGRKPVYNP 163
SQ K+ E +L+E H+ W+ +AIIKK P E + S++ H + ++ P
Sbjct: 292 SQAKMQEALAKLDEHHHQGDHEEDWLFGKQDAIIKK-PFEKEDSSSIIVHGT-KSSIHKP 349
Query: 164 FP-LPFPLPATD--HTCSQIGRSTFTGGVYQQ-----------------NSRSIAPAVQV 283
FP L + T + SQ+G S F G + N + IAPAVQ+
Sbjct: 350 FPQLDTSMLKTSLFDSTSQVGSSRFLGSLNPNPITPTPIRAKSMYTGGFNPQRIAPAVQI 409
Query: 284 RSVIPVCXXXXXXXXNQTAMKECSSTSTPPSTAELA 391
RSVIPVC T SS+S PPST E A
Sbjct: 410 RSVIPVCAAPPSPPI--TTPSSSSSSSNPPSTKEAA 443
>dbj|GAV88793.1| dsrm domain-containing protein [Cephalotus follicularis]
Length = 483
Score = 57.0 bits (136), Expect = 5e-06
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 25/147 (17%)
Frame = +2
Query: 2 SQVKVPEIPPELNER---DHEWISKISEAIIKKNPTEMKGSNNSS--SHFYGRKPVYNPF 166
SQ+K EIP + E + EW+ +AI K EM+GS++SS S +G +Y P
Sbjct: 295 SQMKKQEIPIPMQEHLEDEEEWLGIKLDAI--KQSIEMEGSSSSSNSSSLHGASSLYRPS 352
Query: 167 PL-PFPL-------------------PATDHTCSQIGRSTFTGGVYQQNSRSIAPAVQVR 286
L P L P++ + R +TGG + N + IAPAVQ+R
Sbjct: 353 HLKPNTLYKTTTQHEHTHMRSRVIGSPSSSPIAPHVSRDMYTGG-FNFNPQRIAPAVQIR 411
Query: 287 SVIPVCXXXXXXXXNQTAMKECSSTST 367
SVIPVC +K+ S+++T
Sbjct: 412 SVIPVCAAPPPTMRPPPTVKDTSTSTT 438