BLASTX nr result

ID: Rehmannia32_contig00024637 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00024637
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU18630.1| hypothetical protein MIMGU_mgv1a015164mg [Erythra...    65   1e-10
gb|KZV27349.1| hypothetical protein F511_02458 [Dorcoceras hygro...    57   1e-07

>gb|EYU18630.1| hypothetical protein MIMGU_mgv1a015164mg [Erythranthe guttata]
          Length = 166

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 51/107 (47%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
 Frame = -3

Query: 387 QELTGQDSDLPESARFVAADGVG-------GEVAKVAAEDNNIVHA---GEAKLGHSTSC 238
           QELTGQD+D  E+ARF AA              AKVAA      HA   G  KLG + S 
Sbjct: 59  QELTGQDADFSETARFAAAGAADKVEAVAPAAAAKVAAVKEESAHAVVEGVEKLGQTNSD 118

Query: 237 DGEVGMENGSDPL-TFGS-CDDYYGNNAFCTPLVMENFQGLMASNYL 103
           D E     GSDPL TFGS  DD   ++AFCT  ++EN+  LMAS+YL
Sbjct: 119 DVERN-GPGSDPLSTFGSYLDDV--DDAFCTVKMIENYPTLMASSYL 162


>gb|KZV27349.1| hypothetical protein F511_02458 [Dorcoceras hygrometricum]
          Length = 170

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 16/109 (14%)
 Frame = -3

Query: 387 QELTGQDSDLPESARFVAADGVGG--------EVAKVAAE-DNNIVHAGE--AKLGHSTS 241
           QELTGQDSDLPES+   AADG GG        E A++  E   + VHA E   K+G    
Sbjct: 47  QELTGQDSDLPESSTKFAADGWGGGGQPEKPHEAAEIVREGGRSTVHALEDGRKIGQHND 106

Query: 240 CDGEVGMENGSDPL-TFGSCDDYYGNNAFC----TPLVMENFQGLMASN 109
           CD  V  E+  +P+ +FG        +AF     +P ++E F+GL+ SN
Sbjct: 107 CD--VSQESDPEPVWSFGGVPQGLDPSAFSSEIYSPQMVEEFRGLVDSN 153


Top