BLASTX nr result

ID: Rehmannia32_contig00024214 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00024214
         (582 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021736574.1| uncharacterized protein LOC110703132 [Chenop...    45   7e-08

>ref|XP_021736574.1| uncharacterized protein LOC110703132 [Chenopodium quinoa]
          Length = 267

 Score = 44.7 bits (104), Expect(2) = 7e-08
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
 Frame = +2

Query: 41  ILWWLWKTRNLWVFQKIWKSEQEVVDGVVLEWKEFQEVGKQEVALKKGL------FVPAV 202
           I W +W+ RN+W+F+K  + E +++   +    E++E   +E ++ +GL        PA 
Sbjct: 52  IAWGIWRKRNMWIFEKKERRESDILHKAMGLIGEYEEANLRENSVSQGLQCSSVWKAPAA 111

Query: 203 GLMY*SVGAAFSKGNLISFGG 265
           GL   +  AAF  G ++  GG
Sbjct: 112 GLYKLNTDAAF-HGQILGIGG 131



 Score = 39.7 bits (91), Expect(2) = 7e-08
 Identities = 23/87 (26%), Positives = 43/87 (49%)
 Frame = +3

Query: 243 GILLVLGGVTVDDKGVILRAWKVSRDGLFNPVEDKLMAIRFALVRASQAGWRRVVIKIDD 422
           G +L +GGV  DD G  + A+  ++ G F     + +A+R +   A +AG+ + +++ D+
Sbjct: 124 GQILGIGGVLRDDSGAAVVAYCSTKKGSFAVDVGEAVAMRASFRIAMEAGFSKFILETDN 183

Query: 423 EDIAKRLNSGALPPGFSLTIAEDIFFL 503
             +   +  G  PP     +  DI  L
Sbjct: 184 LKLYHHMKKGLTPPCAFGNVVRDILLL 210


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