BLASTX nr result

ID: Rehmannia32_contig00023858 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023858
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020550492.1| chromatin structure-remodeling complex prote...    98   5e-21
gb|EYU46280.1| hypothetical protein MIMGU_mgv1a000094mg [Erythra...    96   4e-20
ref|XP_012829739.1| PREDICTED: chromatin structure-remodeling co...    96   4e-20
gb|PIN02410.1| Chromatin remodeling complex SWI/SNF [Handroanthu...    77   9e-14

>ref|XP_020550492.1| chromatin structure-remodeling complex protein SYD [Sesamum
           indicum]
          Length = 2871

 Score = 98.2 bits (243), Expect = 5e-21
 Identities = 54/122 (44%), Positives = 69/122 (56%), Gaps = 14/122 (11%)
 Frame = +2

Query: 83  DGTRGDITDRKGKEQLV--------------NXXXXXXXXXXXXXXXXKEVDFAKLSKKR 220
           DGTR D  D+KGK+Q +                               KE DFAK+ ++R
Sbjct: 306 DGTRRDHVDQKGKDQFIPDPSSVSEVPRSLERPDSSKGPPSILDSNLLKEADFAKIPEER 365

Query: 221 SSRPVIPAKNEQDRKCSVARGKTNVEVLTHEATELHASAKREPHDASTPEILDRNHEDDL 400
           S++P + A+NEQDRKC V R KT+ E LT +  ELHASA+REPH +ST E   RNHE+DL
Sbjct: 366 STQPAMLAENEQDRKCLVTRRKTDAESLTQDNVELHASAQREPHHSSTREAFSRNHENDL 425

Query: 401 VN 406
            N
Sbjct: 426 GN 427


>gb|EYU46280.1| hypothetical protein MIMGU_mgv1a000094mg [Erythranthe guttata]
          Length = 1828

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 12/121 (9%)
 Frame = +2

Query: 83  DGTRGDITDRKGKEQLVNXXXXXXXXXXXXXXXXK------------EVDFAKLSKKRSS 226
           DG R D  D+KGKEQ ++                K            E DFAK  ++R S
Sbjct: 196 DGNRRD--DQKGKEQFIHDPSSVPEVPRERPDSSKDRPSILDGNTSKESDFAKFPEERGS 253

Query: 227 RPVIPAKNEQDRKCSVARGKTNVEVLTHEATELHASAKREPHDASTPEILDRNHEDDLVN 406
           +P IPA+NE DRK  VARGK   E++T EA +LHAS +REPH++ST E   RNH+DDL N
Sbjct: 254 QPTIPAENELDRKSLVARGKPEAEIITQEAMQLHASIQREPHESSTREGFSRNHDDDLGN 313

Query: 407 D 409
           +
Sbjct: 314 N 314


>ref|XP_012829739.1| PREDICTED: chromatin structure-remodeling complex protein SYD
           [Erythranthe guttata]
          Length = 3399

 Score = 95.5 bits (236), Expect = 4e-20
 Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 12/121 (9%)
 Frame = +2

Query: 83  DGTRGDITDRKGKEQLVNXXXXXXXXXXXXXXXXK------------EVDFAKLSKKRSS 226
           DG R D  D+KGKEQ ++                K            E DFAK  ++R S
Sbjct: 304 DGNRRD--DQKGKEQFIHDPSSVPEVPRERPDSSKDRPSILDGNTSKESDFAKFPEERGS 361

Query: 227 RPVIPAKNEQDRKCSVARGKTNVEVLTHEATELHASAKREPHDASTPEILDRNHEDDLVN 406
           +P IPA+NE DRK  VARGK   E++T EA +LHAS +REPH++ST E   RNH+DDL N
Sbjct: 362 QPTIPAENELDRKSLVARGKPEAEIITQEAMQLHASIQREPHESSTREGFSRNHDDDLGN 421

Query: 407 D 409
           +
Sbjct: 422 N 422


>gb|PIN02410.1| Chromatin remodeling complex SWI/SNF [Handroanthus impetiginosus]
          Length = 3016

 Score = 77.4 bits (189), Expect = 9e-14
 Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
 Frame = +2

Query: 83  DGTRGDITDRKGKEQLVN--------------XXXXXXXXXXXXXXXXKEVDFAKLSKKR 220
           DGTR D+ D+KGKEQ V+                              KE DFAK++ +R
Sbjct: 260 DGTRKDLIDQKGKEQFVHDPTNVPEVPRSLERPDSSKGHPSILDSSSSKEADFAKMADER 319

Query: 221 SSRPVIPAKNEQDRKCSVARGKTNVEVLTHEATELHASAKREPHDASTPEILDRNHEDD 397
           SS+P I           V   K N E+LT EA EL+ S +RE HD+ST +I+ RNHEDD
Sbjct: 320 SSQPSI-----------VTERKVNAEILTQEAAELYTSVQRESHDSSTRDIISRNHEDD 367


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