BLASTX nr result

ID: Rehmannia32_contig00023840 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023840
         (555 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03068.1| hypothetical protein CDL12_24406 [Handroanthus im...    75   5e-14
ref|XP_020550405.1| RNA-binding protein 12-like [Sesamum indicum]      69   1e-11
gb|PIN03078.1| hypothetical protein CDL12_24405 [Handroanthus im...    54   8e-06

>gb|PIN03068.1| hypothetical protein CDL12_24406 [Handroanthus impetiginosus]
          Length = 149

 Score = 75.5 bits (184), Expect = 5e-14
 Identities = 53/127 (41%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
 Frame = -2

Query: 500 MAAFKYYFLISLVMALSFSNLHTIQAARSLLQNVPTIXXXXXXXXXXXXXXPAVPNLPS- 324
           MAA KYYFLISL++ALS S+LHTIQAARSLLQ VPT+              P+VPNLPS 
Sbjct: 1   MAALKYYFLISLIIALSSSSLHTIQAARSLLQTVPTVPNQPPLPKATLPPLPSVPNLPSA 60

Query: 323 --------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPAMPKVTL 186
                         A                                   TMP MPKVTL
Sbjct: 61  TLPPMPPAMPNLPAATLPPLPANPLPTQPTVPSLPKPTLPPMPTTMPSLPTMPTMPKVTL 120

Query: 185 PPLPAAM 165
           PPLPA M
Sbjct: 121 PPLPATM 127


>ref|XP_020550405.1| RNA-binding protein 12-like [Sesamum indicum]
          Length = 131

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 41/112 (36%), Positives = 56/112 (50%)
 Frame = -2

Query: 500 MAAFKYYFLISLVMALSFSNLHTIQAARSLLQNVPTIXXXXXXXXXXXXXXPAVPNLPSA 321
           MAA  YYFL+SL++A+SF+NLH ++AARSLLQ +PT+              P +PNLPSA
Sbjct: 1   MAALSYYFLVSLIVAVSFTNLHAVEAARSLLQTMPTMPNLPPLPKATLPPLPTLPNLPSA 60

Query: 320 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPAMPKVTLPPLPAAM 165
                                              ++P +PK++LPPLPA M
Sbjct: 61  ---TLPPLPATPLPTQPTVPSLPKPTFPPMPTTIPSLPMVPKMSLPPLPATM 109


>gb|PIN03078.1| hypothetical protein CDL12_24405 [Handroanthus impetiginosus]
          Length = 138

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 43/116 (37%), Positives = 51/116 (43%), Gaps = 4/116 (3%)
 Frame = -2

Query: 500 MAAFKYYFLISLVMALSFSNLHTIQAARSLLQNVPTIXXXXXXXXXXXXXXPAVPNLPSA 321
           MA+FK YFL+SLV+AL FS+   I A R LLQ+ PTI              PAVPNLPSA
Sbjct: 1   MASFKSYFLLSLVLALFFSS-PQIYAGRCLLQSQPTIPNLPPLPKATMPPLPAVPNLPSA 59

Query: 320 ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMPAMPKVTLPPLPAAM 165
                                                  T+P +PK+T PPLPA M
Sbjct: 60  TLPPLPAMPNVPSSTLPPLSATPLPTQPTLLKPTLPQMPTVPTLPKLTRPPLPATM 115


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