BLASTX nr result

ID: Rehmannia32_contig00023569 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023569
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020553385.1| RING-H2 finger protein ATL20-like isoform X2...    78   2e-14
ref|XP_011093099.2| RING-H2 finger protein ATL20-like isoform X1...    78   3e-14
gb|PIN13893.1| Anaphase-promoting complex (APC), subunit 11 [Han...    69   5e-11

>ref|XP_020553385.1| RING-H2 finger protein ATL20-like isoform X2 [Sesamum indicum]
          Length = 370

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -2

Query: 318 GGKTITKIIAIASSMPALMLMAFGCCSVFCLHITRMITGKH--DVVSXXXXXXXXXXXXX 145
           G K++TKI+A+ASS+P L++ AF C SVFCLH+ RMI  K+  D  S             
Sbjct: 214 GAKSLTKIVAMASSLPVLIITAFSCFSVFCLHLLRMIREKYEADSASAAAATSTTTPTPQ 273

Query: 144 XXXXXALPPPSTATNTGLDESKIMAFKDLWLFSKGSD 34
                 +P PST +NTGLDESKIMA  ++ + S   +
Sbjct: 274 TTMVTIMPLPSTTSNTGLDESKIMACTEIIVLSDSGE 310


>ref|XP_011093099.2| RING-H2 finger protein ATL20-like isoform X1 [Sesamum indicum]
          Length = 482

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
 Frame = -2

Query: 318 GGKTITKIIAIASSMPALMLMAFGCCSVFCLHITRMITGKH--DVVSXXXXXXXXXXXXX 145
           G K++TKI+A+ASS+P L++ AF C SVFCLH+ RMI  K+  D  S             
Sbjct: 326 GAKSLTKIVAMASSLPVLIITAFSCFSVFCLHLLRMIREKYEADSASAAAATSTTTPTPQ 385

Query: 144 XXXXXALPPPSTATNTGLDESKIMAFKDLWLFSKGSD 34
                 +P PST +NTGLDESKIMA  ++ + S   +
Sbjct: 386 TTMVTIMPLPSTTSNTGLDESKIMACTEIIVLSDSGE 422


>gb|PIN13893.1| Anaphase-promoting complex (APC), subunit 11 [Handroanthus
           impetiginosus]
          Length = 387

 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 38/93 (40%), Positives = 51/93 (54%)
 Frame = -2

Query: 312 KTITKIIAIASSMPALMLMAFGCCSVFCLHITRMITGKHDVVSXXXXXXXXXXXXXXXXX 133
           K I KIIAIA SMPAL+++   CCSVFC H+ +MI  K +  +                 
Sbjct: 237 KPIAKIIAIALSMPALIIIGLSCCSVFCFHLMKMIGDKQE--ANPLAAPTTLASPPTTVG 294

Query: 132 XALPPPSTATNTGLDESKIMAFKDLWLFSKGSD 34
             +PP S  TNTGLDESKI A  ++ + S+  +
Sbjct: 295 TPVPPLSITTNTGLDESKITACTEIVVLSENDE 327


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