BLASTX nr result

ID: Rehmannia32_contig00023565 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023565
         (385 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011101170.1| zinc finger CCCH domain-containing protein 4...    68   9e-11
ref|XP_012851978.1| PREDICTED: zinc finger CCCH domain-containin...    64   4e-09
ref|XP_011076248.1| zinc finger CCCH domain-containing protein 4...    62   2e-08
gb|PIN26803.1| Cdc4 and related F-box and WD-40 protein [Handroa...    61   3e-08
gb|EPS70603.1| hypothetical protein M569_04157, partial [Genlise...    60   5e-08
gb|PIN16674.1| Cdc4 and related F-box and WD-40 protein [Handroa...    60   5e-08

>ref|XP_011101170.1| zinc finger CCCH domain-containing protein 48 [Sesamum indicum]
          Length = 437

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 34/42 (80%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNGNN--NKQQKVCFHCLQ*KQT 380
           MDVDGGRRVFHR+GPSSST NGNN  NKQQKVCFH  Q K T
Sbjct: 1   MDVDGGRRVFHRIGPSSSTGNGNNNSNKQQKVCFHWRQGKCT 42


>ref|XP_012851978.1| PREDICTED: zinc finger CCCH domain-containing protein 48
           [Erythranthe guttata]
 gb|EYU25047.1| hypothetical protein MIMGU_mgv1a006714mg [Erythranthe guttata]
          Length = 434

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHCLQ*KQT 380
           MD+DGGR+VF+RLGPSSS+DNGN+NKQQKVC +  Q K T
Sbjct: 1   MDMDGGRKVFNRLGPSSSSDNGNHNKQQKVCIYWRQGKCT 40


>ref|XP_011076248.1| zinc finger CCCH domain-containing protein 48 [Sesamum indicum]
          Length = 435

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHCLQ*KQT 380
           MDVDGGRR+F RLG SSS+D+ +NNKQQKVCFH  Q K T
Sbjct: 1   MDVDGGRRMFQRLGSSSSSDSSSNNKQQKVCFHWRQGKCT 40


>gb|PIN26803.1| Cdc4 and related F-box and WD-40 protein [Handroanthus
           impetiginosus]
          Length = 432

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 31/40 (77%), Positives = 33/40 (82%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHCLQ*KQT 380
           MD+DGGRRVF+RLGPSSSTD  N NKQQKVCFH  Q K T
Sbjct: 1   MDMDGGRRVFNRLGPSSSTD--NTNKQQKVCFHWRQGKCT 38


>gb|EPS70603.1| hypothetical protein M569_04157, partial [Genlisea aurea]
          Length = 440

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 30/40 (75%), Positives = 34/40 (85%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNGNNNKQQKVCFHCLQ*KQT 380
           MDVDGGRRVF+R+GPS+STDNG  +KQQKVCFH  Q K T
Sbjct: 1   MDVDGGRRVFNRMGPSASTDNG--SKQQKVCFHWRQGKCT 38


>gb|PIN16674.1| Cdc4 and related F-box and WD-40 protein [Handroanthus
           impetiginosus]
          Length = 441

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = +3

Query: 261 MDVDGGRRVFHRLGPSSSTDNG--NNNKQQKVCFHCLQ*KQT 380
           M++DGGRRVFHR G SSS+DNG  NN+KQQKVCFH  Q K T
Sbjct: 1   MNMDGGRRVFHRFGSSSSSDNGGSNNSKQQKVCFHWRQGKCT 42


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